Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12142
- Subject:
- XR_934495.2
- Aligned Length:
- 4406
- Identities:
- 1387
- Gaps:
- 2996
Alignment
Query 1 -------------------------------ATGGCGGAACCGGGCGGCGCGGCGGGCCGGTCCCATCCGGAAG 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGATGTTGACAGCGTCGCCTAGCAACGGGAAATGGCGGAACCGGGCGGCGCGGCGGGCCGGTCCCATCCGGAAG 74
Query 44 ATGGATCGGCTTCTGAGGGAGAGAAGGAAGGGAATAATGAAAGCCACATGGTGTCACCACCAGAGAAGGATGAT 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ATGGATCGGCTTCTGAGGGAGAGAAGGAAGGGAATAATGAAAGCCACATGGTGTCACCACCAGAGAAGGATGAT 148
Query 118 GGCCAGAAAGGTGAAGAAGCTGTCGGTAGCACAGAGCATCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAAT 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGCCAGAAAGGTGAAGAAGCTGTCGGTAGCACAGAGCATCCTGAGGAAGTCACAACCCAAGCGGAAGCTGCAAT 222
Query 192 TGAAGAGGGGGAGGTCGAGACAGAAGGGGAAGCAGCAGTGGAAGGGGAAGAGGAGGCTGTGTCCTATGGAGATG 265
|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGAAGAGGGGGAGGTGGAGACAGAAGGGGAAGCAGCAGTGGAAGGGGAAGAGGAGGCTGTGTCCTATGGAGATG 296
Query 266 CTGAAAGCGAAGAGGAATATTACTATACAGAAACTTCATCCCCGGAAGGGCAAATCAGTGCTGCAGATACGACT 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTGAAAGCGAAGAGGAATATTACTATACAGAAACTTCATCCCCGGAAGGGCAAATCAGTGCTGCAGATACGACT 370
Query 340 TACCCGTATTTCAGTCCTCCTCAGGAACTGCCTGGAGAGGAGGCATACGATAGTGTTAGCGGGGAGGCTGGTCT 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TACCCGTATTTCAGTCCTCCTCAGGAACTGCCTGGAGAGGAGGCATACGATAGTGTTAGCGGGGAGGCTGGTCT 444
Query 414 CCAAGGCTTCCAGCAAGAGGCCACCGGTCCACCAGAATCCAGAGAAAGGAGGGTCACCTCCCCAGAGCCATCCC 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CCAAGGCTTCCAGCAAGAGGCCACCGGTCCACCAGAATCCAGAGAAAGGAGGGTCACCTCCCCAGAGCCATCCC 518
Query 488 ACGGAGTCTTAGGCCCGTCGGAGCAAATGGGCCAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGACAGGATCC 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACGGAGTCTTAGGCCCGTCGGAGCAAATGGGCCAGGTCACCTCTGGGCCAGCAGTGGGCAGATTGACAGGATCC 592
Query 562 ACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACAT 635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ACAGAGGAGCCCCAGGGGCAGGTGCTCCCAATGGGCGTCCAGCACCGCTTCCGGCTGAGCCACGGGAGCGACAT 666
Query 636 CGAGTCCTCAGACCTGGAGGAGTTCGTCTCGCAGGAGCCAGTGATCCCCCCAGGGGTGCCCGATGCCCACCCCA 709
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGAGTCCTCAGACCTGGAGGAGTTCGTCTCGCAGGAGCCAGTGATCCCCCCAGGGGTGCCCGATGCCCACCCCA 740
Query 710 GGGAAGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGA 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGGAAGGAGACCTGCCAGTGTTCCAGGACCAGATCCAGCAGCCCAGCACCGAGGAGGGGGCCATGGCAGAGAGA 814
Query 784 GTGGAGTCCGAGGGGAGTGACGAGGAAGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGACCCAGACCACCC 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTGGAGTCCGAGGGGAGTGACGAGGAAGCAGAAGACGAAGGGTCCCAGCTGGTGGTTTTGGACCCAGACCACCC 888
Query 858 CCTGATGGTAAGATTTCAGGCTGCCCTGAAGAACTACCTGAACCGACAGATCGAAAAGTTGAAGCTGGACCTCC 931
|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CCTGATGGTAAGATTCCAGGCTGCCCTGAAGAACTACCTGAACCGACAGATCGAAAAGTTGAAGCTGGACCTCC 962
Query 932 AAGAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTGAATCTCTATGAGGTGCAG 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAGAGCTGGTTGTGGCTACCAAGCAGAGCCGAGCCCAGCGGCAGGAGCTGGGGGTGAATCTCTATGAGGTGCAG 1036
Query 1006 CAGCACCTGGTACACCTGCAGAAGCTGCTGGAGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAG 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CAGCACCTGGTACACCTGCAGAAGCTGCTGGAGAAGAGTCACGACCGCCACGCAATGGCCTCGAGCGAGCGCAG 1110
Query 1080 GCAGAAGGAGGAGGAGCTGCAGGCCGCCCGCGCTCTCTACACCAAGACCTGCGCAGCCGCCAACGAGGAGCGCA 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GCAGAAGGAGGAGGAGCTGCAGGCCGCCCGCGCTCTCTACACCAAGACCTGCGCAGCCGCCAACGAGGAGCGCA 1184
Query 1154 AAAAGTTGGCGGCTCTGCAGACTGAGATGGAGAACTTGGCCCTGCATCTCTTCTACATGCAGAACATCGACCAG 1227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AAAAGTTGGCGGCTCTGCAGACTGAGATGGAGAACTTGGCCCTGCATCTCTTCTACATGCAGAACATCGACCAG 1258
Query 1228 GACATGCGTGACGACATCCGCGTGATGACACAAGTGGTAAAGAAGGCCGAGACGGAGAGGATCCGGGCAGAAAT 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GACATGCGTGACGACATCCGCGTGATGACACAAGTGGTAAAGAAGGCCGAGACGGAGAGGATCCGGGCAGAAAT 1332
Query 1302 CGAGAAGAAAAAGCAGGGCGT-----TGGA--------------GA-CACAGGTGCTG--------------CC 1341
|||||||||||||||||.|.| |||| || |.|||...||| ||
Sbjct 1333 CGAGAAGAAAAAGCAGGACCTGTATGTGGACCAGCTCACCACTCGAGCCCAGCAACTGGAAGAAGACATTGCCC 1406
Query 1342 T---------TCATTCCTAAAACCACCCAGGGTGACCAGGTCTCGGGACGCGGA----AAGAAAAAGCCGGGCA 1402
| |||.|.|| ...||||.|.|| |||.| ||.|||| |||.||| |||
Sbjct 1407 TGTTTGAGGCTCAGTACT----TGGCCCAAGCTG---AGGAC-----ACCCGGATTTTAAGGAAA------GCA 1462
Query 1403 CTGTG-GTGGCACGTGTCT-CACC--------CGC--TGAGCTT------------------------------ 1434
.||.| |.||| || |||| ||| |.|||.|
Sbjct 1463 GTGAGTGAGGC------CTGCACCGAGATCGACGCCATCAGCGTGGAGAAGAGGCGCATCATGCAGCAATGGGC 1530
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 1531 CAGCAGCCTGGTGGGCATGAAGCACCGCGACGAGGCGCACAGGGCGGTGCTGGAGGCGCTCAGAGGATGCCAGC 1604
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 1605 ATCAAGCCAAATCCACCGACGGCGAGATTGAGGCCTATAAGAAATCCATCATGAAGGAGGAAGAAAAGAACGAG 1678
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 1679 AAGCTGGCGAGCATCCTGAACCGGACAGAGACGGAAGCCACACTGCTGCAGAAGCTCACCACCCAGTGCCTGAC 1752
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 1753 CAAGCAGGTGGCCCTGCAGAGCCAGTTCAATACCTACAGGCTCACCCTGCAGGACACAGAGGATGCCCTCAGCC 1826
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 1827 AGGACCAGCTGGAACAAATGATACTCACGGAGGAGTTGCAGGCCATCCGCCAAGCCATCCAGGGCGAGCTGGAG 1900
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 1901 CTCAGGAGGAAGACGGATGCTGCCATCCGGGAGAAGCTGCAGGAGCACATGACCTCCAACAAGACCACCAAATA 1974
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 1975 CTTCAACCAGCTCATCCTGAGGCTGCAGAAGGAGAAGACCAACATGATGACACATCTTTCCAAAATCAACGGTG 2048
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2049 ACATTGCCCAGACCACCCTGGACATCACACACACCAGCAGCAGGCTGGACGCACACCAGAAGACCCTGGTGGAG 2122
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2123 CTGGACCAGGACGTGAAGAAAGTCAACGAGCTCATCACCAACAGCCAGAGCGAGATCTCCCGGCGCACGATCCT 2196
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2197 GATCGAGAGGAAGCAAGGGCTCATCAACTTCCTCAACAAGCAGCTGGAGCGGATGGTCTCCGAGCTGGGGGGGG 2270
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2271 AAGAAGTGGGGCCCCTGGAGCTTGAAATCAAAAGGCTGAGCAAGCTGATCGACGAGCACGATGGCAAGGCGGTC 2344
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2345 CAGGCCCAGGTGACCTGGCTGCGCCTGCAGCAGGAGATGGTCAAGGTGACACAGGAGCAGGAGGAGCAGCTGGC 2418
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2419 CTCCCTGGACGCATCCAAGAAGGAGCTCCACATCATGGAGCAGAAGAAACTACGAGTAGAAAGCAAGATTGAGC 2492
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2493 AGGAGAAGAAGGAGCAGAAGGAGATCGAGCACCACATGAAGGACCTGGACAACGACCTGAAGAAGCTCAACATG 2566
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2567 TTGATGAATAAAAACCGGTGCAGCTCGGAGGAGCTGGAGCAGAACAACCGGGTGACAGAGAATGAGTTCGTGCG 2640
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2641 CTCGCTGAAGGCCTCTGAGAGGGAGACCATCAAGATGCAGGACAAGCTGAACCAGCTCAGCGAGGAGAAGGCGA 2714
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2715 CCCTCCTGAATCAACTGGTGGAAGCAGAGTGAGTCCCAGTCTCCAGCCACACGTGGGTCATGAAGGTCACTGCA 2788
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2789 CCTACAGGCCTCTGTCCGTTGAAGACCATGTAGGAGGCCAGACACCAGATTATGCTTTGGGAGAAAAAAATCCA 2862
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2863 ACTGGCAAAAGAGATGCGTTCCTCAGTGGATTCCGAGATCGGCCAGACGGAGATCCGGGCCATGAAGGGCGAGA 2936
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 2937 TCCACAGGATGAAGGTCAGGCTCGGGCAGCTGCTGAAGCAGCAGGAGAAGATGATCCGTGCCATGGAGTTGGCG 3010
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3011 GTTGCCCGCAGAGAGACCGTCACCACCCAGGCCGAGGGGCAGCGCAAGATGGACAGGAAGGCGCTCACCCGCAC 3084
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3085 CGACTTCCACCACAAGCAGCTTGAGCTGCGCCGGAAAATCAGGGACGTTCGCAAGGCCACCGATGAGTGCACCA 3158
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3159 AAACCGTCCTGGAACTGGAAGAAACACAAAGAAATGTGAGCAGCTCCCTCCTAGAGAAGCAGGAAAAGCTGTCG 3232
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3233 GTGATTCAGGCAGACTTCGACACACTCGAGGCCGACCTCACCCGGCTTGGGGCCCTCAAACGACAGAACCTTTC 3306
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3307 AGAGATCGTGGCCCTGCAGACACGCCTTAAGCACCTGCAGGCTGTGAAGGAGGGGCGCTACGTGTTCCTGTTCC 3380
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3381 GCTCCAAGCAGTCCCTAGTGCTGGAGCGCCAGCGCCTGGACAAGCGACTGGCTCTCATCGCCACCATCCTGGAC 3454
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3455 CGCGTGCGGGACGAGTACCCCCAGTTCCAGGAGGCCCTGCACAAGGTCAGCCAGATGATCGCCAACAAGCTCGA 3528
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3529 GTCACCAGGGCCCTCCTAGGGAGCAGCCTGGACTCCGCCTTGCAAGGCCTCCAGGAAGAGATCCGGAATTGTGT 3602
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3603 TTGTCATGAGGGACTTGGAATCTTTTGTGTTCCTAAAAACCACATGTACCCTCAGAAGGGCATCGTTTAAGAGA 3676
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3677 AATAAGCCAGCCCCACCCATAGGAATCTTTTTAGCCACTCAGCAATTTAATAAACCAGGTAAAATCCTAGCGTT 3750
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3751 TCCCATGGCATCCCATCGCAAAGACAGAGCCTGTGACTGCAGACCCACACACCCACACTCCCACACTGGGCTTA 3824
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3825 CTCGTCCAGGTAACACTTTGGTTTGCAGCACTCCCAAATCTGCACGTGCCTCTCACAACACAACGCTGCCACAG 3898
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3899 GTCCACAAGCTGGTGGGCTGAGCAGAGGTGGGAAAGTTAAGGCAGCTCCAGCCAGCCTGGCCCGGGAGGCTGGT 3972
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 3973 CCCCCCAGCACTTCCCTCTACTAGGTGCATCTGAAAACCCACAAACCACCTTCTTTACCAGTTTTCCCATCCCC 4046
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 4047 ACCCCTTAGAACTCTCAGGTCCCTTTTCCTGCCCCCATGTCCCCATTTGAGTTAAATTCAGATCCACAGCTTGC 4120
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 4121 AGGAGAAAGTCAGTGGCCCCAGACACACGTAACAGGGTGAGCACTGAAATAAGAGCACGCTGGGGCGTCCACAC 4194
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 4195 CAAGGGACTACGCCCCAGTCTGCCCACCTATCTTTTCTCCATCATTAACCCAGCGCTCTTTCTCCCTGGACTTC 4268
Query 1435 -------------------------------------------------------------------------- 1434
Sbjct 4269 CAAGTACCAATGACCTTGGGGCTTCTTTGCAGTTTAAAGGGAAAATGCTCTACAAAATAATTTCACTTTCAAAC 4342
Query 1435 ---------------------------------------- 1434
Sbjct 4343 ATTTCAGCAGAAGAATAAAATCTTTTTTCTGAATATCTAG 4382
