Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12159
- Subject:
- NM_001006634.3
- Aligned Length:
- 2643
- Identities:
- 342
- Gaps:
- 2298
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAGAAGCAGTTCAACCGCATGAAGCAGCTGGCTAACCAGACCGTGGGCAGAGCTGAGAAAACAGAAGTCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAGTGAAGATCTATTACAGATTGAGAGACGCCTGGACACGGTGCGGTCAATATGCCACCATTCCCATAAGCGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGTGGCATGTTTCCAGGGCCAGCATGGCACCGATGCCGAGAGGAGACACAAAAAACTGCCTCTGACAGCTCTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAAGACTCTCTCCTGGGGAAGATGCTGGAGACGTGTGGAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGCTGAGAATCAGCTGGCTCTCGAGCTCTCCCAGCACGAAGTCTTTGTTGAGAAGGAGATCGTGGACCCTCTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAGCAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACTGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATTCAGTCAGAGCCAGGTGGAACCAAGCTCACAAATCCTCAGGAACCAACTTTCAGGGGCTTCCATCAAAAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGATACTCTAAAGGAAGAGATGGATGAAGCTGGAAATAAAGTAGAACAGTGCAAGGATCAACTTGCAGCAGACA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGTACAACTTTATGGCCAAAGAAGGGGAGTATGGCAAATTCTTTGTTACGTTATTAGAAGCCCAAGCAGATTAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATAGAAAAGCATTAGCAGTCTTAGAAAAGACCCTCCCCGAAATGCGAGCCCATCAAGATAAGTGGGCGGAAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCAGCCTTTGGGACTCCCCTAGAAGAACACCTGAAGAGGAGCGGGCGCGAGATTGCGCTGCCCATTGAAGCCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTGTCATGCTGCTTCTGGAGACAGGCATGAAGGAGGAGGGCCTTTTCCGAATTGGGGCTGGGGCCTCCAAGTTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGAAGCTGAAAGCTGCTTTGGACTGTTCTACTTCTCACCTGGATGAGTTCTATTCAGACCCCCATGCTGTAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGGTGCTTTAAAATCCTATTTACGGGAATTGCCTGAACCTTTGATGACTTTTAATCTGTATGAAGAATGGACAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAGTTGCAAGTGTGCAGGATCAAGACAAAAAACTTCAAGACTTGTGGAGAACATGTCAGAAGTTGCCACCACAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AATTTTGTTAACTTTAGATATTTGATCAAGTTCCTTGCAAAGCTTGCTCAGACCAGCGATGTGAATAAAATGAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCCAGCAACATTGCGATTGTGTTAGGCCCTAACTTGTTATGGGCCAGAAATGAAGGAACACTTGCTGAAATGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAGCAGCCACATCCGTCCATGTGGTTGCAGTGATTGAACCCATCATTCAGCATGCCGACTGGTTCTTCCCTGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGGTGGAATTTAATGTATCAGAAGCATTTGTACCTCTCACCACCCCGAGTTCTAATCACTCATTCCACACTGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAACGACTCTGACTCGGGGACCCTGGAGAGGAAGCGGCCTGCTAGCATGGCGGTGATGGAAGGAGACTTGGTGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGAAGGAAAGCTTTGGTGTGAAGCTTATGGACTTCCAGGCCCACCGGCGGGGTGGCACTCTAAATAGAAAGCAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATATCCCCCGCTTTCCAGCCGCCACTTCCGCCCACAGATGGCAGCACCGTGGTGCCCGCTGGCCCAGAGCCCCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCCCCAGAGCTCTAGGGCTGAAAGCAGCTCTGGGGGTGGGACTGTCCCCTCTTCCGCGGGCATACTGGAGCAGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGCCGAGCCCAGGCGACGGCAGTCCTCCCAAACCGAAGGACCCTGTATCTGCAGCTGTGCCAGCACCAGGGAGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AACAACAGTCAGATAGCATCTGGCCAAAATCAGCCCCAGGCAGCTGCTGGCTCCCACCAGCTCTCCATGGGCCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACCTCACAATGCTGCAGGGCCCAGCCCGCATACACTGCGCCGAGCTGTTAAAAAACCCGCTCCAGCACCCCCGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AACCGGGCAACCCACCTCCTGGCCACCCCGGGGGCCAGAGTTCTTCAGGAACATCTCAGCATCCACCCAGTCTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCACCAAAGCCACCCACCCGAAGCCCCTCTCCTCCCACCCAGCACACGGGCCAGCCTCCAGGCCAGCCCTCCGC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCCCTCCCAGCTCTCAGCACCCCGGAGGTACTCCAGCAGCTTGTCTCCAATCCAAGCTCCCAATCACCCACCGC 2146
Query 1 -----------------------------ATGCACACCAAACCCAATAGCCAGGGCCCTCCCAACCCCATGGCA 45
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CGCAGCCCCCTACGCAGGCCACGCCACTGATGCACACCAAACCCAATAGCCAGGGCCCTCCCAACCCCATGGCA 2220
Query 46 TTGCCCAGTGAGCATGGACTTGAGCAGCCATCTCACACCCCTCCCCAGACTCCAACGCCCCCCAGTACTCCGCC 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TTGCCCAGTGAGCATGGACTTGAGCAGCCATCTCACACCCCTCCCCAGACTCCAACGCCCCCCAGTACTCCGCC 2294
Query 120 CCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTCAGACCCTGGCAGGGGGTAACCCTGAAACTGCACAGCCAC 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTCAGACCCTGGCAGGGGGTAACCCTGAAACTGCACAGCCAC 2368
Query 194 ATGCTGGAACCTTACCGAGACCGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGCGTGCCCCCACCCCCCCAA 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ATGCTGGAACCTTACCGAGACCGAGACCAGTACCAAAGCCAAGGAACCGGCCCAGCGTGCCCCCACCCCCCCAA 2442
Query 268 CCTCCTGGTGTCCACTCAGCTGGGGACAGCAGCCTCACCAACACAGCACCAACAGCTTCCAAGATAGTTACAGA 341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 2443 CCTCCTGGTGTCCACTCAGCTGGGGACAGCAGCCTCACCAACACAGCACCAACAGCTTCCAAGATAGTAACAGA 2516
Query 342 -TGTA--------------------------------------------------------------------- 345
|..|
Sbjct 2517 CTCCAATTCCAGGGTTTCAGAACCGCATCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACG 2590
Query 346 ----------------------------------------------------- 345
Sbjct 2591 TGCCTGGCCGCATCCTGCTGGATATAGACAATGATACCGAGAGCACTGCCCTG 2643
