Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12198
Subject:
NM_001271016.1
Aligned Length:
633
Identities:
364
Gaps:
240

Alignment

Query   1  --------------------------------------------------------------------------  0
                                                                                     
Sbjct   1  ATGTTGGGCCCCCGCGGCGTGACGCGAGCACGGCGGCTCCGCCCCCTGCGTCTCGGGCCTCGCTGGCCTTGGGG  74

Query   1  -------------ATGGCGTCAATGCAGAAACGACTACAGAAAGAACTGTTGGCTTTGCAAAATGACCCATCTC  61
                        ||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||.|||
Sbjct  75  GGATGGTTTCATCATGGCGTCAATGCAGAAACGACTACAAAAAGAACTGTTGGCTTTGCAGAATGACCCACCTC  148

Query  62  CTGGAATGACCTTAAATGAGAAGAGTGCTCAAAATTCAATTACACAGTGGATTGTAGACATGGAAAGTGCACCA  135
           ||||||||||.||||||||.|||||||.|||.||||||||.||.||||||||.||||||||||||.||||||||
Sbjct 149  CTGGAATGACTTTAAATGAAAAGAGTGTTCAGAATTCAATCACGCAGTGGATCGTAGACATGGAAGGTGCACCA  222

Query 136  GGTACCTTATATGAAGGGGAAAAATTTCAACTTCTATTTAAATTTAGTAGTCGATATCCTTTTGACTCTCCTCA  209
           ||.||||||||||||||||||||||||||||||.|.||||||||||||||||||||.|||||||||||||||  
Sbjct 223  GGAACCTTATATGAAGGGGAAAAATTTCAACTTTTGTTTAAATTTAGTAGTCGATACCCTTTTGACTCTCCT--  294

Query 210  GGTCATGTTTACTGGTGAAAATATTCCTGTTCATCCTCATGTTTATAGCAATGGTCATATCTGTTTATCCATTC  283
                                                                                     
Sbjct 295  --------------------------------------------------------------------------  294

Query 284  TAACAGAAGACTGGTCCCCAGCGCTCTCAGTCCAATCAGTTTGTCTTAGCATTATTAGCATGCTTTCCAGCTGC  357
              ||||||||||||||||.|||||||||||.||.|||||.|||||.||||||||.||||||||||||||||||
Sbjct 295  ---CAGAAGACTGGTCCCCGGCGCTCTCAGTGCAGTCAGTCTGTCTCAGCATTATCAGCATGCTTTCCAGCTGC  365

Query 358  AAGGAAAAGAGACGACCACCGGATAATTCTTTTTATGTGCGAACATGTAACAAGAATCCAAAGAAAACAAAATG  431
           ||.|||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 366  AAAGAAAAGAGACGACCACCAGATAATTCCTTTTATGTGCGAACATGTAACAAGAATCCAAAGAAAACAAAATG  439

Query 432  GTGGTATCAT------------------------------------------------GAACTG------AAA-  450
           ||||||||||                                                ||||||      ||| 
Sbjct 440  GTGGTATCATGGTGGATACAGTGCCCGTGGAGGCCAGAAGAGGGACTCTTACCCACTGGAACTGGAGTTTAAAG  513

Query 451  -------TCTGCCTTCAT---ACTATCTATTACGGAT----  477
                  |.|||..||||   |.| |||||    |.|    
Sbjct 514  ATAGTTGTGTGCTGTCATGTGAGT-TCTAT----GGTCACC  549