Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12198
- Subject:
- NR_073122.1
- Aligned Length:
- 3141
- Identities:
- 342
- Gaps:
- 2769
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTGGGCCCCCGCGGCGTGACGCGAGCACGGCGGCTCCGCCCCCTGCGTCTCGGGCCTCGCTGGCCTTGGGG 74
Query 1 -------------ATGGCGTCAATGCAGAAACGACTACAGAAAGAACTGTTGGCTTTGCAAAATGACCCATCTC 61
||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||.|||
Sbjct 75 GGATGGTTTCATCATGGCGTCAATGCAGAAACGACTACAAAAAGAACTGTTGGCTTTGCAGAATGACCCACCTC 148
Query 62 CTGGAATGACCTTAAATGAGAAGAGTGCTCAAAATTCAATTACACAGTGGATTGTAGACATGGAAAGTGCACCA 135
||||||||||.||||||||.|||||||.|||.||||||||.||.||
Sbjct 149 CTGGAATGACTTTAAATGAAAAGAGTGTTCAGAATTCAATCACGCA---------------------------- 194
Query 136 GGTACCTTATATGAAGGGGAAAAATTTCAACTTCTATTTAAATTTAGTAGTCGATATCCTTTTGACTCTCCTCA 209
Sbjct 195 -------------------------------------------------------------------------- 194
Query 210 GGTCATGTTTACTGGTGAAAATATTCCTGTTCATCCTCATGTTTATAGCAATGGTCATATCTGTTTATCCATTC 283
||||||||||||||||||||||||||..|||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 195 -GTCATGTTTACTGGTGAAAATATTCCCATTCATCCTCATGTGTATAGCAATGGTCATATCTGTTTATCCATTC 267
Query 284 TAACAGAAGACTGGTCCCCAGCGCTCTCAGTCCAATCAGTTTGTCTTAGCATTATTAGCATGCTTTCCAGCTGC 357
|||||||||||||||||||.|||||||||||.||.|||||.|||||.||||||||.||||||||||||||||||
Sbjct 268 TAACAGAAGACTGGTCCCCGGCGCTCTCAGTGCAGTCAGTCTGTCTCAGCATTATCAGCATGCTTTCCAGCTGC 341
Query 358 AAGGAAAAGAGACGACCACCGGATAATTCTTTTTATGTGCGAACATGTAACAAGAATCCAAAGAAAACAAAATG 431
||.|||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||
Sbjct 342 AAAGAAAAGAGACGACCACCAGATAATTCCTTTTATGTGCGAACATGTAACAAGAATCCAAAGAAAACAAAATG 415
Query 432 GTGGTATCATGAACTGAAA------------TCTGCCTTCATACTAT--------------CTATTACG----- 474
|||||||||||| |||.| .|||||.||.|.||.| |||.|..|
Sbjct 416 GTGGTATCATGA--TGACACTTGTTGATGCCGCTGCCCTCCTCCTGTAGCAGAAGATAGTCCTACTGAGAAATG 487
Query 475 --------GAT--------------------------------------------------------------- 477
|||
Sbjct 488 AGCACTTTGATCATTCAGTCTTTGAACTTTAACCTTTGACTGGAAGTGACCTATAGGCAATGAAGACTACTTCC 561
Query 478 -------------------------------------------------------------------------- 477
Sbjct 562 TTTTACTGCATTTTTACTCGTGTGCATTCTGGGCGCATGTTGATCGCTGGTTCAGTCCAGTCAACCGACATGCT 635
Query 478 -------------------------------------------------------------------------- 477
Sbjct 636 TTTATTAGTCATACAGTATTAATGCAGGTGTCAGGAAATGTCAACTATAATTCCATTTTTTATTTTTATTTTTT 709
Query 478 -------------------------------------------------------------------------- 477
Sbjct 710 TAAGCTTTTGGAAAAGTTCCAGGTCCTCGTGTATTGTGCAATAACAGTGACTTCCTCAGTGGTTTGGGGACGTT 783
Query 478 -------------------------------------------------------------------------- 477
Sbjct 784 CATTGCCGGCAATGGACGTTGTAAAAGGAAGAGTTTTCTTAACTCCTGCCACTTGGTGATTAATGCATGATAGG 857
Query 478 -------------------------------------------------------------------------- 477
Sbjct 858 GCCTATGAAATGAATTTATCAGTTGTTGTGGGATTATAAGGAAAGTGAGGGATCCAACATTACATTGAAAGCCA 931
Query 478 -------------------------------------------------------------------------- 477
Sbjct 932 CCCCAATTGTTTATATTTGGATTCTATGCACTGTGATCCTAAGGCCAACAGCATGAAATTACATGCATCTTTAA 1005
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1006 AGGACCGAAAGAAAGATCATTGCATATTTATTTAATTGTTTATATCTGCTGTCAAATTGTTTTGACATGGAAAG 1079
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1080 TTTTCGAGGAACATTGGCAGAGAGGTACAATATGTTATCCCTATGGTGAAAATAAATTCATTTGTTGTATATAC 1153
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1154 TCCTCAGTCTCTGAAGTGAAGGTGTGAATAATAGAGTGTGGATGGTTAACCAAGGTGTTGTTTGGAAGTAAAAG 1227
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1228 AAAAAATGGCAGTGATGATTAAATTACTGCCATCCATCATTTGGGCCTGTTATTATTTTTCCAAGTATATTATA 1301
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1302 CTCTGTTACTTCCTGCTAGCCATCAGCATGAGCCCTATTGCCTAAACACTATTTCATTTATTTATGTTTGGAAA 1375
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1376 AAATCCATAAACATTTTTGTTTGTAATCTTGTTTCTTTTGTTATGTTTTCAGTTGTTTAAATGTTATAATACTT 1449
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1450 TAATTGAAAGAATTTTGTCAAGTTTTTTTTTCTTGTAAATTTTCTTTACTTGTATCATCTTGTCCTTCAATACT 1523
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1524 GTACCCTAAAATAAGAAATACATTTTTGACAGAGGCTTAATGTTTTAACAAAAGAGTGTGGACATTTTTATTTT 1597
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1598 AAGATTTTGGTAAAAGGATACTATAAAAACAATGTTTGCTTATTTGTCTCACTTACCCATTGTGTAGGGTTTCT 1671
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1672 TGGAAGAACTTGTTTTGTTTGTTGAGAAGATTTTGCCTACAGTTAGATGAAGTTTTTCTGTCTGCCTGTCTGTC 1745
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1746 TGTCTCTACTCTTATCTATCTGTATGTATGTAGGTATCTATCTATCATCTCTCTCTCTGATCTATAAAACAATT 1819
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1820 GTTGAGAAGGTTCCATCCTAAATACCATGTACCATGTAATGATTATATAACTAGGTCTTTTTAAGAAGTGATTA 1893
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1894 ATGTATTTTATAAATTACCTTTTCACATATGCAAGCTCTGTTTCTATGACAATGTTATTTTTACTGATGCCTTA 1967
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1968 CTGTTATAGTCTTTTTGAATATCCTGCAGTGAATATATTAATCAATTTGGGCTAAAAATAAAAGCCAGTTGGCT 2041
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2042 GAAAGGTCTGACGGTATGTAAACCCATAAAAAAATCATTCAACTGATAATTGGTAAAGAATATTTTAAAAATTG 2115
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2116 TTTTTAACCTCTGTGTAGATGACATTTTGTAGCTTTTTACATGTTGTTAATTAAGGGCATATAATTTTACACTC 2189
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2190 TAAAAGTATAACTGCTGAACTCAGGGGTGGGTAGACTTCAAAAATATGTCTACTGTAGAAATAACTTGAAAAAA 2263
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2264 ATTAAATCCATGGCCAGCCACCAAATTGTGGACACTGTTTATAAAACTAGGGAGCAATCATCATTTTTTAAAGA 2337
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2338 TTATAAACGTTTTCTTCTGTCTTGACTGCATGTATATAAGTTCCCACAGTAACCATTATCAGTTTTATTAGTTG 2411
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2412 GCCTTCTTGACATGAAAAAAATCTTTACGTTCTTACGTTTCTTCTGCTTTTACGATGAAATCACAGCTGTAAGT 2485
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2486 TAAGTTTATGTCACTGCTCTAAATATTAATTAGCTCTTTTGTCGGGTTGGGGACACAGGGAGAAACACTTACCT 2559
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2560 ATCCGTGGTCCTCTTACTAAAATCCTGGCCTGTGACGTCACTCACCGAAGGAGCTCCCACACCAGGTCAGCAGC 2633
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2634 AACAGTGCTGGAATGTAGATCACCAGCTTCCGTTGTGCTTTTATAACAGTGCTTTACTATACCTCTCTCTATGC 2707
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2708 AGACACTGTAGGGCAGACGCAAATGAAATGGGAAATAGGGAAAAACCAAACACTTTTGCTTCATGTTTGGTACC 2781
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2782 AAGAGAAGAAATTAAAAATATATCTAAAATAGTGGAGCATCAACTATTACTAATTCATAATTAGATTAATATTA 2855
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2856 CTCCTTTGAATTTAGAAGCCACTGAAAATTCTTTTACACTTGCATTTAATTATTTGTCATTATTAAGAGTCATA 2929
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2930 AGATGTGTATCTGGGTCATTGTTCTGTTGAGGGCAAGTTATAAAACAAATATTTTGCTGTAATGTTAACTACTG 3003
Query 478 --------------------------------- 477
Sbjct 3004 AAAGAGCCAGAATTACAAGAAATGCATATGAAA 3036
