Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12243
- Subject:
- NM_001365598.2
- Aligned Length:
- 2874
- Identities:
- 645
- Gaps:
- 2229
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGTAGCGGCAGTGGCCGCCGGCGGAGCAGTCTGAGCCCGACGATGAGGCCGGGGACGGGAGCTGAGCGTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGCCTCATGGTGAGTGAAATGGAGAGCCATCCTCCCTCGCAGGGTCCTGGGGACGGGGAGCGGAGATTGTCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTCAAGCCTCTGCTCCGGCTCTTGGGTCTCTGCTGACGGCTTCCTGAGGAGACGGCCCTCGATGGGGCACCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCATGCATTATGCCCCAATGGGAATGCACCCTATGGGTCAGAGAGCGAATATGCCTCCTGTACCTCATGGAAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATGCCGCAGATGATGCCCCCTATGGGAGGGCCACCAATGGGACAAATGCCTGGAATGATGTCGTCAGTAATGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGGAATGATGATGTCTCATATGTCTCAGGCTTCCATGCAGCCTGCCTTACCGCCAGGAGTAAATAGTATGGAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTAGCAGCAGGTACAGCATCTGGTGCAAAATCAATGTGGACTGAACATAAATCACCTGATGGAAGGACTTACTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTACAACACTGAAACCAAACAGTCTACCTGGGAGAAACCAGATGATCTTAAAACACCTGCTGAGCAACTCTTAT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTAAATGCCCCTGGAAGGAATACAAATCAGATTCTGGAAAGCCTTACTATTATAATTCTCAAACAAAAGAATCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CGCTGGGCCAAACCTAAAGAACTTGAGGATCTTGAAGCAATGATCAAAGCTGAAGAAAGCAGTAAGCAAGAAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTGCACCACAACATCAACAGCCCCAGTCCCTACAACAGAAATTCCGACCACAATGAGCACCATGGCTGCTGCCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGCAGCAGCTGCTGTTGTTGCAGCAGCAGCAGCGGCAGCAGCAGCAGCAGCTGCAGCCAATGCTAATGCTTCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACTTCTGCTTCTAATACTGTCAGTGGAACTGTTCCAGTTGTTCCTGAGCCTGAAGTTACTTCCATTGTTGCTAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGTTGTAGATAATGAGAATACAGTAACTATTTCAACTGAGGAACAAGCACAACTTACTAGTACCCCTGCTATTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGATCAAAGTGTGGAAGTATCCAGTAATACTGGAGAAGAAACATCTAAGCAAGAAACTGTAGCTGATTTTACT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCAAAAAAGAAGAGGAGGAGAGCCAACCAGCAAAGAAAACATACACTTGGAATACAAAGGAAGAGGCAAAGCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGCTTTTAAAGAATTATTGAAAGAAAAGCGGGTACCATCGAATGCTTCATGGGAGCAGGCTATGAAAATGATTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTAATGATCCACGATACAGTGCTTTGGCAAAGTTAAGTGAAAAAAAGCAAGCCTTTAATGCCTATAAAGTCCAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACAGAAAAAGAAGAAAAAGAAGAAGCAAGATCAAAGTACAAAGAGGCTAAGGAATCCTTTCAGCGTTTTCTTGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAATCATGAGAAAATGACTTCTACAACCAGATACAAAAAAGCAGAGCAAATGTTTGGAGAGATGGAAGTTTGGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATGCAATATCAGAACGTGATCGTCTTGAAATCTATGAAGATGTTTTGTTCTTTCTTTCAAAAAAAGAAAAGGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAAGCAAAGCAGTTGCGAAAGAGAAATTGGGAAGCCTTAAAAAACATACTTGACAACATGGCTAATGTAACATA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTCTACCACTTGGTCTGAAGCCCAGCAGTATCTGATGGATAATCCAACTTTTGCAGAAGATGAGGAGTTACAAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ATATGGACAAAGAAGATGCATTAATTTGCTTTGAAGAACACATTCGGGCTTTAGAAAAGGAGGAAGAAGAAGAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAACAGAAGAGTTTGCTGAGAGAAAGGAGACGACAGCGAAAAAATAGGGAATCTTTCCAGATATTTTTAGATGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ATTACATGAACATGGACAACTGCATTCTATGTCATCTTGGATGGAATTGTATCCAACTATTAGTTCTGATATTA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GATTCACTAATATGCTTGGTCAGCCTGTTTTTTCATTAGGATCAACTGCACTTGATCTTTTCAAGTTTTATGTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAGGATCTTAAAGCACGTTATCATGACGAGAAGAAGATAATAAAAGACATTCTAAAGGATAAAGGATTTGTAGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGAAGTAAACACTACTTTTGAAGATTTTGTGGCGATAATCAGTTCAACTAAAAGATCAACTACATTAGATGCTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GAAATATCAAATTGGCTTTCAATAGTTTACTAGAAAAGGCAGAAGCCCGTGAACGTGAAAGAGAAAAAGAAGAG 2220
Query 1 ---------ATGAAACGAAAAGAATCTGCATTTAAGAGTATGTTAAAACAAGCTGCTCCTCCGATAGAATTGGA 65
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GCTCGGAAGATGAAACGAAAAGAATCTGCATTTAAGAGTATGTTAAAACAAGCTGCTCCTCCGATAGAATTGGA 2294
Query 66 TGCTGTCTGGGAAGATATCCGTGAGAGATTTGTAAAAGAGCCAGCATTTGAGGACATAACTCTAGAATCTGAAA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TGCTGTCTGGGAAGATATCCGTGAGAGATTTGTAAAAGAGCCAGCATTTGAGGACATAACTCTAGAATCTGAAA 2368
Query 140 GAAAACGAATATTTAAAGATTTTATGCATGTGCTTGAGCATGAATGTCAGCATCATCATTCAAAGAACAAGAAA 213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GAAAACGAATATTTAAAGATTTTATGCATGTGCTTGAGCATGAATGTCAGCATCATCATTCAAAGAACAAGAAA 2442
Query 214 CATTCTAAGAAATCTAAAAAACATCATAGGAAACGTTCCCGCTCTCGATCGGGGTCAGATTCAGATGATGATGA 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CATTCTAAGAAATCTAAAAAACATCATAGGAAACGTTCCCGCTCTCGATCGGGGTCAGATTCAGATGATGATGA 2516
Query 288 TAGCCATTCAAAGAAAAAAAGACAGCGATCAGAGTCTCGTTCTGCTTCAGAACATTCTTCTAGTGCAGAGTCTG 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TAGCCATTCAAAGAAAAAAAGACAGCGATCAGAGTCTCGTTCTGCTTCAGAACATTCTTCTAGTGCAGAGTCTG 2590
Query 362 AGAGAAGTTATAAAAAGTCAAAAAAGCATAAGAAGAAAAGTAAGAAGAGGAGACATAAATCTGACTCTCCAGAA 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 AGAGAAGTTATAAAAAGTCAAAAAAGCATAAGAAGAAAAGTAAGAAGAGGAGACATAAATCTGACTCTCCAGAA 2664
Query 436 TCCGATGCTGAGCGAGAGAAGGATAAAAAAGAAAAAGATCGGGAAAGTGAAAAAGACAGAACTAGACAAAGATC 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 TCCGATGCTGAGCGAGAGAAGGATAAAAAAGAAAAAGATCGGGAAAGTGAAAAAGACAGAACTAGACAAAGATC 2738
Query 510 AGAATCAAAACACAAATCGCCTAAGAAAAAGACTGGAAAGGATTCTGGTAATTGGGATACTTCTGGCAGCGAAC 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 AGAATCAAAACACAAATCGCCTAAGAAAAAGACTGGAAAGGATTCTGGTAATTGGGATACTTCTGGCAGCGAAC 2812
Query 584 TGAGTGAAGGGGAATTGGAAAAGCGCAGAAGAACCCTTTTGGAGCAACTGGATGATGATCAA 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 TGAGTGAAGGGGAATTGGAAAAGCGCAGAAGAACCCTTTTGGAGCAACTGGATGATGATCAA 2874
