Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12292
- Subject:
- NM_001252579.1
- Aligned Length:
- 2724
- Identities:
- 404
- Gaps:
- 2277
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCAAATCCTGAGGGAAGAGGGGAAGGAATCCCATCCTCACGACACCACCTCGGCCTCTGCATCCAGGAAGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCAAAGGACCAGCAAGCCACGCCAATGGCACCCCCTGGCCTGCCACTATGGCTGCTGTCCACCGCTCTCCTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCTGCTGGCTGGCAGCTCGGCCTTCCTCTCCCATCCCCGCCTGAAGGGACGCTTCCAGAGGGACCGCAGGAAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATCCGGCCCAACATCATCTTGGTGCTTACGGATGACCAGGATGTGGAGCTGGGCTCCATGCAAGTGATGAACAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACAAGGCGTATCATGGAGCAGGGCGGGGCGCACTTCATCAATGCCTTCGTGACTACACCAATGTGCTGTCCGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCGCTCCTCCATTCTCACCGGCAAGTACGTCCACAACCACAACACCTACACCAACAATGAGAATTGTTCCTCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCTCCTGGCAGGCCCAGCACGAGAGCCGCACCTTCGCCGTGTATCTCAACAGCACAGGCTACCGGACAGCTTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTCGGAAAATACCTCAATGAGTACAACGGCTCATACGTGCCGCCCGGCTGGAAGGAGTGGGTCGGCCTACTTA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGAACTCCCGCTTTTATAACTACACACTCTGCCGGAATGGGGTGAAGGAGAAACATGGCTCAGACTACTCCACG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATTACCTCACGGATCTCATCACCAATGACAGTGTGAGCTTCTTCCGAACATCCAAGAAGATGTACCCACACAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCCGTGCTCATGGTCATCAGCCACGCGGCTCCCCATGGCCCCGAGGACTCAGCACCCCAGTACTCACGGCTCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCCCAATGCGTCCCAGCACATCACACCGAGTTACAACTATGCACCCAACCCAGACAAGCATTGGATCATGCGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TACACGGGACCCATGAAGCCCATTCACATGGAATTCACCAACATGCTACAACGAAAACGCCTACAGACCCTCAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTCTGTGGATGACTCCATGGAGACGATCTATGACATGCTGGTGGAGACGGGGGAGCTGGACAACACGTACATCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGTACACCGCCGACCACGGCTACCACATTGGCCAGTTTGGGCTGGTGAAGGGCAAGTCTATGCCGTATGAATTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACATCAGAGTCCCGTTCTACGTGAGGGGCCCCAACGTGGAAGCTGGCTCTCTGAACCCCCACATTGTCCTCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATTGACCTGGCCCCCACCATACTGGATATCGCTGGACTGGACATCCCTGCAGACATGGACGGGAAGTCTATTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCAAACTACTGGACTCAGAGCGGCCAGTGAACCGGTTCCACTTGAAAAAGAAGCTGAGGGTCTGGCGAGACTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTCCTGGTGGAGAGAGGCAAACTGCTCCACAAGAGGGAGGGTGACAAAGTGAATGCCCAGGAGGAGAACTTCCT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCCAAGTACCAGCGCGTGAAGGACCTGTGTCAGCGAGCTGAGTACCAGACAGCATGCGAACAGCTGGGGCAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGTGGCAGTGTGTGGAGGACGCTTCTGGGACGCTGAAGCTGCACAAATGTAAAGGCCCCATGCGGTTTGGTGGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGCGGTGGCAGCAGAGCCCTCTCCAACCTGGTGCCCAAGTATGACGGCCAGAGCAGCGAGGCCTGCAGCTGTGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAGTGGCGGTGGAGGGGACTACAAACTGGGCCTGGCTGGACGCCGTAAGCTCTTTAAGAAAAAGTATAAGACCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCTATGCCCGGAACCGCTCCATCCGTTCCGTGGCCATCGAGGTGGACGGTGAGATATACCACGTAGGCTTGGAT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACTGTGCCTCAGCCCCGCAACCTTAGCAAGCCGCACTGGCCAGGGGCCCCTGAAGACCAAGATGACAAGGATGG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGCAGTTTCAGTGGTACTGGTGGCCTTCCAGATTATTCTGCCCCCAATCCCATCAAAGTGACCCATCGGTGCT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ACATCCTTGAGAATGACACAGTCCAGTGCGACTTGGACCTGTACAAGTCCCTGCAGGCTTGGAAAGACCACAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTGCACATCGACCATGAGATCGAAACCCTGCAGAACAAAATTAAGAACCTTCGAGAAGTCAGGGGTCACCTGAA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAAGAAGCGACCGGAAGAATGTGACTGCCATAGAATCAGTTACCACAGCCAACACAAAGGCCGTCTCAAGCACA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAGGCTCCAGCCTGCACCCTTTCAGGAAGGGTCTGCAGGAGAAGGACAAGGTGTGGCTGCTGCGGGAGCAGAAA 2220
Query 1 ---------------------------------------------------------ATGCCAGGCCTCACGTG 17
|||||.|||||||||||
Sbjct 2221 CGCAAGAAGAAACTGCGCAAGCTGCTCAAACGGCTGCAGAACAACGATACGTGCAGCATGCCCGGCCTCACGTG 2294
Query 18 CTTCACCCACGACAACCAGCACTGGCAGACGGCGCCTTTCTGGACACTGGGGCCTTTCTGTGCCTGCACCAGCG 91
|||.||||||||||||||.|||||||||||||||||..|||||||.||||||||.|||||.|||||||||||||
Sbjct 2295 CTTTACCCACGACAACCACCACTGGCAGACGGCGCCACTCTGGACGCTGGGGCCGTTCTGCGCCTGCACCAGCG 2368
Query 92 CCAACAATAACACGTACTGGTGCATGAGGACCATCAATGAGACTCACAATTTCCTCTTCTGTGAATTTGCAACT 165
|||||||.|||||||||||||||.||||||||||.||||||||.|||||.|||||||||||.|||||||||||.
Sbjct 2369 CCAACAACAACACGTACTGGTGCTTGAGGACCATAAATGAGACCCACAACTTCCTCTTCTGCGAATTTGCAACC 2442
Query 166 GGCTTCCTAGAGTACTTTGATCTCAACACAGACCCCTACCAGCTGATGAATGCAGTGAACACACTGGACAGGGA 239
||||||.||||.||||||||.||||..|||||||||||||||||||||||.||.||||||||||||||||||||
Sbjct 2443 GGCTTCATAGAATACTTTGACCTCAGTACAGACCCCTACCAGCTGATGAACGCGGTGAACACACTGGACAGGGA 2516
Query 240 TGTCCTCAACCAGCTACACGTACAGCTCATGGAGCTGAGGAGCTGCAAGGGTTACAAGCAGTGTAACCCCCGGA 313
.|||||.|||||.||.|||||.||||||||||||||.||||||||.||.||.|||||||||||.||||||||||
Sbjct 2517 CGTCCTTAACCAACTGCACGTGCAGCTCATGGAGCTAAGGAGCTGTAAAGGCTACAAGCAGTGCAACCCCCGGA 2590
Query 314 CTCGAAACATGGACCTGGGACTTAAAGATGGAGGAAGCTATGAGCAATACAGGCAGTTTCAGCGTCGAAAGTGG 387
|.||.||||||||||||||.||||.|||.||||||||||||||.||||||||||||||||||||||||||.|||
Sbjct 2591 CCCGCAACATGGACCTGGGGCTTAGAGACGGAGGAAGCTATGAACAATACAGGCAGTTTCAGCGTCGAAAATGG 2664
Query 388 CCAGAAATGAAGAGACCTTCTTCCAAATCACTGGGACAACTGTGGGAAGGCTGGGAAGGT 447
||||||||||||||||||||||||||||||||||||||.||.||||||||.||||||||.
Sbjct 2665 CCAGAAATGAAGAGACCTTCTTCCAAATCACTGGGACAGCTATGGGAAGGTTGGGAAGGC 2724
