Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12325
- Subject:
- NM_001350508.1
- Aligned Length:
- 1734
- Identities:
- 552
- Gaps:
- 1182
Alignment
Query 1 ATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAGCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGAT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTAT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTACC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 ATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCGA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAATC 592
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 -------ATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAATC 67
Query 593 CTCTACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 68 CTCTACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCA 141
Query 667 GCACAGGAGTTCTTCCAACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 142 GCACAGGAGTTCTTCCAACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTT 215
Query 741 GAGCATTGAAGAGTACATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 216 GAGCATTGAAGAGTACATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTT 289
Query 815 ATCGTGAAAAATCTCAAGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 290 ATCGTGAAAAATCTCAAGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACG 363
Query 889 GCTGTAGTAGATCTCTCTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 364 GCTGTAGTAGATCTCTCTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCT 437
Query 963 CTATGCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGT-- 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 438 CTATGCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGTGA 511
Query 1035 --GATAAAGGACAAAAAAAGCATTTTCAGCAAGTATTCCAAATGC----------------------------- 1077
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 512 CAGATAAAGGACAAAAAAAGCATTTTCAGCAAGTATTCCAAATGCTGAAGATCATGGGATATGACTGGGCAGAA 585
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 586 AGGTGCCAGCACGTGCCCTTTGGAGTAGTACAGGGAATGAAGACTCGAAGAGGAGATGTCACTTTCCTGGAAGA 659
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 660 TGTTTTAAATGAGATTCAATTAAGGATGCTACAGAACATGGCTTCAATTAAGACAACTAAAGAACTCAAGAACC 733
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 734 CACAAGAGACTGCAGAGAGGGTCGGGCTCGCAGCACTCATTATTCAGGACTTCAAAGGTTTACTCTTATCTGAC 807
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 808 TACAAGTTCAGCTGGGATCGTGTTTTCCAGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACACACACGCCCG 881
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 882 CCTCCACAGTTTGGAAGAGACTTTTGGATGTGGGTACCTGAATGACTTCAACACTGCTTGTTTACAAGAGCCAC 955
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 956 AGTCTGTTTCAATTCTTCAGCATCTTCTCAGGTTCGACGAGGTGCTTTATAAATCATCTCAGGACTTTCAACCC 1029
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1030 AGGCATATCGTCAGTTACCTTCTAACTTTAAGTCATCTTGCAGCTGTGGCACACAAAACACTACAAATAAAAGA 1103
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1104 TAGTCCTCCTGAAGTGGCTGGGGCCAGACTTCATCTTTTCAAAGCTGTCCGTTCTGTCCTAGCCAATGGAATGA 1177
Query 1078 -------------------------------- 1077
Sbjct 1178 AACTTCTTGGAATAACACCTGTATGTAGGATG 1209
