Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12325
- Subject:
- NR_146746.1
- Aligned Length:
- 2740
- Identities:
- 1068
- Gaps:
- 1663
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGAGGCGGGTCGTATAAGGAGGTGGGGCGAGGCCGGAACTGGCGGACTGCGGCGCACTTCCGTAGAGGTGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAGGTATGGATCCCGGAGCGCGCAGAGGAGTCCCTGAGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTAGGGACCCCAAAGGCCTTTCACCGCTGCGGGCCAGTCCTCAGTCAGCTGGAGGGTGGGTCCCACGGAATCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGTTAGTTTCTACCACCTCCTCCCCCTTCTCTGGAGCTGGTGGAGCTTCAGAAGTCCTGTGGAGCGTCGGCTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GATCAGTTTGTCTCGGTGAAAAGTAAACTTTGAAAGCACCAGCAAAGTGCCCGAAACATAAGTGTTTAATGTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATTTGAAGAATGAATACCTGAGTATCTCTGTTGTGATCTCATATAAAATATGCAGCTTCACTGAATGAGTTCAT 444
Query 1 ------------------ATGGCGT------GCGGCT--------------TTCGCCGC--------------- 21
|||.||| |.|||| ||.|..||
Sbjct 445 AATTTTAAATCTATGGAGATGACGTGGTGTGGTGGCTAAAGGAACTCCATCTTGGATGCTAATCTGCCATGTTG 518
Query 22 GCTATTGCTT---GCCAG--------------CTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGATCACA 78
.||.|||.|| .|||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ACTTTTGATTATCCCCAGTTCCAGGAATACCTCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGATCACA 592
Query 79 TCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTATTGGA 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTATTGGA 666
Query 153 AAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGTGATA 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGTGATA 740
Query 227 CAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAAGACA 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAAGACA 814
Query 301 GTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCCAGAA 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCCAGAA 888
Query 375 GAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTACCATCA 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 GAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTACCATCA 962
Query 449 TAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCGATTGG 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCGATTGG 1036
Query 523 GGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAATCCTCT 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAATCCTCT 1110
Query 597 ACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCAGCAC 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCAGCAC 1184
Query 671 AGGAGTTCTTCCAACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTTGAGC 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGGAGTTCTTCCAACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTTGAGC 1258
Query 745 ATTGAAGAGTACATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTTATCG 818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ATTGAAGAGTACATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTTATCG 1332
Query 819 TGAAAAATCTCAAGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACGGCTG 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGAAAAATCTCAAGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACGGCTG 1406
Query 893 TAGTAGATCTCTCTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTAT 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TAGTAGATCTCTCTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTAT 1480
Query 967 GCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGT----GA 1036
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1481 GCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGTGACAGA 1554
Query 1037 TAAAGGACAAAAAAAGCATTTTCAGCAAGTATTCCAAATGC--------------------------------- 1077
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TAAAGGACAAAAAAAGCATTTTCAGCAAGTATTCCAAATGCTGAAGATCATGGGATATGACTGGGCAGAAAGGT 1628
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1629 GCCAGCACGTGCCCTTTGGAGTAGTACAGGGAATGAAGACTCGAAGAGGAGATGTCACTTTCCTGGAAGATGTT 1702
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1703 TTAAATGAGATTCAATTAAGGATGCTACAGAACATGGCTTCAATTAAGACAACTAAAGAACTCAAGAACCCACA 1776
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1777 AGAGACTGCAGAGAGGGTCGGGCTCGCAGCACTCATTATTCAGGACTTCAAAGGTTTACTCTTATCTGACTACA 1850
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1851 AGTTCAGCTGGGATCGTGTTTTCCAGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACACACACGCCCGCCTC 1924
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1925 CACAGGGATCATCAAGTGTGCTTCTGCTTATCAAAATGGCTATTAGCATTTTTGCTGCCCAGTAGAGTCAACAG 1998
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1999 TCCAGTAGCTGCCTTCTGCCTCTAGACTTTTCCCAAAGGTTCGACGAGGTGCTTTATAAATCATCTCAGGACTT 2072
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2073 TCAACCCAGGCATATCGTCAGTTACCTTCTAACTTTAAGTCATCTTGCAGCTGTGGCACACAAAACACTACAAA 2146
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2147 TAAAAGATAGTCCTCCTGAAGTGGCTGGGGCCAGACTTCATCTTTTCAAAGCTGTCCGTTCTGTCCTAGCCAAT 2220
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2221 GGAATGAAACTTCTTGGAATAACACCTGTATGTAGGATGTAATTTCCATTAAAATGGCTTTTAAAATGTCAAGT 2294
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2295 GAATTCTAGTTATCTATTCTGAGATGCCTTGCTGTTCAGAATAAATTTAAATTTTTTTTTTTTTTTTTTGAGAT 2368
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2369 GGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGTGATGTTGGCTCACTGCAACCTCCACCTCCCAGG 2442
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2443 TTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGTGCCATCACGCCAGGCTAATTT 2516
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2517 TGTATTTTTAGTAGAGACAGGGTTTCTCTATGTTGGTCAGGCTGGTCTTGCACTCCCGACCTCAGGTTATCTGT 2590
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2591 CTGCCTTGGCCTCCCAAAGTGTTGGGATTAGAGGCATGAACCACCACGCCCAGCCAAAGTTAAACTATTATTCT 2664
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2665 GTGTCAGAATCTGTATTAAATGTGACTTGTCAAGTTATTCAGTCTTTATCCTTAAATAAATGAGTTATCTGAAT 2738
Query 1078 -- 1077
Sbjct 2739 TC 2740
