Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12325
- Subject:
- NR_146754.1
- Aligned Length:
- 2392
- Identities:
- 937
- Gaps:
- 1455
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGAGGCGGGTCGTATAAGGAGGTGGGGCGAGGCCGGAACTGGCGGACTGCGGCGCACTTCCGTAGAGGTGGA 74
Query 1 -ATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCC--------------------------------------- 34
||||||||||||||||||||||||||||||||||
Sbjct 75 CATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAGGTATGGATCCCGGAGCGCGCAGAGGAGTCCCTGAGGA 148
Query 35 -------------------------------------------------------------------------- 34
Sbjct 149 GCTAGGGACCCCAAAGGCCTTTCACCGCTGCGGGCCAGTCCTCAGTCAGCTGGAGGGTGGGTCCCACGGAATCC 222
Query 35 -------------------------------------------------------------------------- 34
Sbjct 223 TGTTAGTTTCTACCACCTCCTCCCCCTTCTCTGGAGCTGGTGGAGCTTCAGAAGTCCTGTGGAGCGTCGGCTGG 296
Query 35 ----------------------------------AGCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGAT 74
||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GATCAGTTTGTCTCGGTGAAAAGTAAACTTTGAAAGCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGAT 370
Query 75 CACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTAT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTAT 444
Query 149 TGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGT 518
Query 223 GATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAA 592
Query 297 GACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCC 666
Query 371 AGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTACC 444
||||||||||||||||||||||||
Sbjct 667 AGAAGAAGATTGTGGTTGAATTCA-------------------------------------------------- 690
Query 445 ATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCGA 518
Sbjct 691 -------------------------------------------------------------------------- 690
Query 519 TTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAATC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 691 ----------------GGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAATC 748
Query 593 CTCTACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 749 CTCTACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCA 822
Query 667 GCACAGGAGTTCTTCCAACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTT 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 823 GCACAGGAGTTCTTCCAACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTT 896
Query 741 GAGCATTGAAGAGTACATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTT 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 897 GAGCATTGAAGAGTACATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTT 970
Query 815 ATCGTGAAAAATCTCAAGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACG 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 971 ATCGTGAAAAATCTCAAGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACG 1044
Query 889 GCTGTAGTAGATCTCTCTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCT 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1045 GCTGTAGTAGATCTCTCTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCT 1118
Query 963 CTATGCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGT-- 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1119 CTATGCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGTGA 1192
Query 1035 --GATAAAGGACAAAAAAAGCATTTTCAGCAAGTATTCCAAATGC----------------------------- 1077
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1193 CAGATAAAGGACAAAAAAAGCATTTTCAGCAAGTATTCCAAATGCTGAAGATCATGGGATATGACTGGGCAGAA 1266
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1267 AGGTGCCAGCACGTGCCCTTTGGAGTAGTACAGGGAATGAAGACTCGAAGAGGAGATGTCACTTTCCTGGAAGA 1340
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1341 TGTTTTAAATGAGATTCAATTAAGGATGCTACAGAACATGGCTTCAATTAAGACAACTAAAGAACTCAAGAACC 1414
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1415 CACAAGAGACTGCAGAGAGGGTCGGGCTCGCAGCACTCATTATTCAGGACTTCAAAGGTTTACTCTTATCTGAC 1488
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1489 TACAAGTTCAGCTGGGATCGTGTTTTCCAGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACACACACGCCCG 1562
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1563 CCTCCACAGTTTGGAAGAGACTTTTGGATGTGGGTACCTGAATGACTTCAACACTGCTTGTTTACAAGAGCCAC 1636
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1637 AGTCTGTTTCAATTCTTCAGCATCTTCTCAGGTTCGACGAGGTGCTTTATAAATCATCTCAGGACTTTCAACCC 1710
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1711 AGGCATATCGTCAGTTACCTTCTAACTTTAAGTCATCTTGCAGCTGTGGCACACAAAACACTACAAATAAAAGA 1784
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1785 TAGTCCTCCTGAAGTGGCTGGGGCCAGACTTCATCTTTTCAAAGCTGTCCGTTCTGTCCTAGCCAATGGAATGA 1858
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1859 AACTTCTTGGAATAACACCTATGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGTGATGTTGGCTC 1932
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1933 ACTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACG 2006
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2007 TGCCATCACGCCAGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTTCTCTATGTTGGTCAGGCTGGTCTTGCA 2080
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2081 CTCCCGACCTCAGGTTATCTGTCTGCCTTGGCCTCCCAAAGTGTTGGGATTAGAGGCATGAACCACCACGCCCA 2154
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2155 GCCAAAGTTAAACTATTATTCTGTGTCAGAATCTGTATTAAATGTGACTTGTCAAGTTATTCAGTCTTTATCCT 2228
Query 1078 ------------------------ 1077
Sbjct 2229 TAAATAAATGAGTTATCTGAATTC 2252
