Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12325
- Subject:
- NR_146755.1
- Aligned Length:
- 2635
- Identities:
- 1077
- Gaps:
- 1558
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGAGGCGGGTCGTATAAGGAGGTGGGGCGAGGCCGGAACTGGCGGACTGCGGCGCACTTCCGTAGAGGTGGA 74
Query 1 -ATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCC--------------------------------------- 34
||||||||||||||||||||||||||||||||||
Sbjct 75 CATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAGGTATGGATCCCGGAGCGCGCAGAGGAGTCCCTGAGGA 148
Query 35 -------------------------------------------------------------------------- 34
Sbjct 149 GCTAGGGACCCCAAAGGCCTTTCACCGCTGCGGGCCAGTCCTCAGTCAGCTGGAGGGTGGGTCCCACGGAATCC 222
Query 35 -------------------------------------------------------------------------- 34
Sbjct 223 TGTTAGTTTCTACCACCTCCTCCCCCTTCTCTGGAGCTGGTGGAGCTTCAGAAGTCCTGTGGAGCGTCGGCTGG 296
Query 35 ----------------------------------AGCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGAT 74
||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GATCAGTTTGTCTCGGTGAAAAGTAAACTTTGAAAGCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGAT 370
Query 75 CACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTAT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTAT 444
Query 149 TGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATGT 518
Query 223 GATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAAA 592
Query 297 GACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCCC 666
Query 371 AGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTACC 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTACC 740
Query 445 ATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCGA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCGA 814
Query 519 TTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAATC 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAATC 888
Query 593 CTCTACAGCATCTCTTTGAA------------------------------------------------------ 612
||||||||||||||||||||
Sbjct 889 CTCTACAGCATCTCTTTGAAGTCTAGAGACAAGATCGCTATGTAGACACACCGTGAACCATTTCCCACTGTGGG 962
Query 613 ----------------------------------------------------------------------GTTT 616
||||
Sbjct 963 CCTGCACCACCCCAGGGGCTTCCTAGCTTCTGCTCTTCTGGAAGTCTTCCCCATCTCCTCCCCATTCCAGGTTT 1036
Query 617 ATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCAGCACAGGAGTTCTTCCAACGATTG 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGCAGCACAGGAGTTCTTCCAACGATTG 1110
Query 691 GAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTTGAGCATTGAAGAGTACATTCGGGT 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACTTGAGCATTGAAGAGTACATTCGGGT 1184
Query 765 TTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTTATCGTGAAAAATCTCAAGAGGTCT 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTTTATCGTGAAAAATCTCAAGAGGTCT 1258
Query 839 TAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACGGCTGTAGTAGATCTCTCTGGGAAT 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAACGGCTGTAGTAGATCTCTCTGGGAAT 1332
Query 913 GGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTATGCAACCAGAGATCTTGCAGC 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTCTCTATGCAACCAGAGATCTTGCAGC 1406
Query 987 TGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGT----GATAAAGGACAAAAAAAGCATT 1056
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1407 TGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGTGACAGATAAAGGACAAAAAAAGCATT 1480
Query 1057 TTCAGCAAGTATTCCAAATGC----------------------------------------------------- 1077
|||||||||||||||||||||
Sbjct 1481 TTCAGCAAGTATTCCAAATGCTGAAGATCATGGGATATGACTGGGCAGAAAGGTGCCAGCACGTGCCCTTTGGA 1554
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1555 GTAGTACAGGGAATGAAGACTCGAAGAGGAGATGTCACTTTCCTGGAAGATGTTTTAAATGAGATTCAATTAAG 1628
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1629 GATGCTACAGAACATGGCTTCAATTAAGACAACTAAAGAACTCAAGAACCCACAAGAGACTGCAGAGAGGGTCG 1702
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1703 GGCTCGCAGCACTCATTATTCAGGACTTCAAAGGTTTACTCTTATCTGACTACAAGTTCAGCTGGGATCGTGTT 1776
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1777 TTCCAGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACACACACGCCCGCCTCCACAGTTTGGAAGAGACTTT 1850
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1851 TGGATGTGGGTACCTGAATGACTTCAACACTGCTTGTTTACAAGAGCCACAGTCTGTTTCAATTCTTCAGCATC 1924
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1925 TTCTCAGGTTCGACGAGGTGCTTTATAAATCATCTCAGGACTTTCAACCCAGGCATATCGTCAGTTACCTTCTA 1998
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1999 ACTTTAAGTCATCTTGCAGCTGTGGCACACAAAACACTACAAATAAAAGATAGTCCTCCTGAAGTGGCTGGGGC 2072
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2073 CAGACTTCATCTTTTCAAAGCTGTCCGTTCTGTCCTAGCCAATGGAATGAAACTTCTTGGAATAACACCTGTAT 2146
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2147 GTAGGATGTAATTTCCATTAAAATGGCTTTTAAAATGTCAAGTGAATTCTAGTTATCTATTCTGAGATGCCTTG 2220
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2221 CTGTTCAGAATAAATTTAAATTTTTTTTTTTTTTTTTTGAGATGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGT 2294
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2295 GCAATGGTGTGATGTTGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGA 2368
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2369 GTAGCTGGGATTACAGGCACGTGCCATCACGCCAGGCTAATTTTGTATTTTTAGTAGAGACAGGGTTTCTCTAT 2442
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2443 GTTGGTCAGGCTGGTCTTGCACTCCCGACCTCAGGTTATCTGTCTGCCTTGGCCTCCCAAAGTGTTGGGATTAG 2516
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2517 AGGCATGAACCACCACGCCCAGCCAAAGTTAAACTATTATTCTGTGTCAGAATCTGTATTAAATGTGACTTGTC 2590
Query 1078 --------------------------------------------- 1077
Sbjct 2591 AAGTTATTCAGTCTTTATCCTTAAATAAATGAGTTATCTGAATTC 2635
