Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12325
- Subject:
- NR_146756.1
- Aligned Length:
- 2301
- Identities:
- 1077
- Gaps:
- 1224
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGGAGGCGGGTCGTATAAGGAGGTGGGGCGAGGCCGGAACTGGCGGACTGCGGCGCACTTCCGTAGAGGTGGA 74
Query 1 -ATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAGCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGA 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CATGGCGTGCGGCTTTCGCCGCGCTATTGCTTGCCAGCTTTCCAGAGTGTTGAATCTTCCACCAGAAAACTTGA 148
Query 74 TCACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTA 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCACATCAATATCTGCAGTTCCAATTTCCCAAAAAGAAGAAGTAGCTGATTTTCAGCTTTCTGTGGATTCTTTA 222
Query 148 TTGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATG 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TTGGAAAAAGACAATGACCATTCAAGACCAGATATTCAAGTTCAAGCCAAGAGACTAGCAGAGAAGCTAAGATG 296
Query 222 TGATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAA 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TGATACAGTGGTGAGTGAAATCAGTACTGGTCAAAGGACTGTAAATTTCAAAATAAACAGAGAGCTCTTAACAA 370
Query 296 AGACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCC 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGACAGTGCTACAACAAGTAATTGAAGATGGCTCAAAATATGGATTAAAAAGTGAACTTTTCTCTGGACTTCCC 444
Query 370 CAGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTAC 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CAGAAGAAGATTGTGGTTGAATTCAGTTCACCTAATGTTGCCAAAAAATTTCATGTTGGACATTTGCGTTCTAC 518
Query 444 CATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCG 517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CATCATAGGAAATTTTATAGCAAATCTCAAAGAAGCTTTAGGACATCAAGTAATAAGAATAAATTACCTTGGCG 592
Query 518 ATTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAAT 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATTGGGGCATGCAGTTTGGTCTTCTGGGAACTGGCTTCCAGCTGTTTGGCTATGAGGAAAAACTGCAGTCCAAT 666
Query 592 CCTCTACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGC 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCTCTACAGCATCTCTTTGAAGTTTATGTACAAGTTAATAAAGAAGCAGCAGATGATAAAAGTGTAGCAAAAGC 740
Query 666 AGCACAGGAGTTCTTCCAACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACT 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCACAGGAGTTCTTCCAACGATTGGAACTGGGCGATGTGCAAGCACTTTCACTGTGGCAAAAATTTCGGGACT 814
Query 740 TGAGCATTGAAGAGTACATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTT 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGAGCATTGAAGAGTACATTCGGGTTTACAAGCGTCTGGGAGTATATTTTGATGAATATTCAGGAGAATCATTT 888
Query 814 TATCGTGAAAAATCTCAAGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAAC 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TATCGTGAAAAATCTCAAGAGGTCTTAAAGTTGCTGGAGAGTAAAGGACTCCTACTGAAAACAATAAAAGGAAC 962
Query 888 GGCTGTAGTAGATCTCTCTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTC 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGCTGTAGTAGATCTCTCTGGGAATGGCGACCCCTCCTCAATTTGTACTGTAATGCGAAGTGATGGGACTTCTC 1036
Query 962 TCTATGCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGT- 1034
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCTATGCAACCAGAGATCTTGCAGCTGCTATAGATCGAATGGACAAGTATAATTTTGATACAATGATATATGTG 1110
Query 1035 ---GATAAAGGACAAAAAAAGCATTTTCAGCAAGTATTCCAAATGC---------------------------- 1077
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACAGATAAAGGACAAAAAAAGCATTTTCAGCAAGTATTCCAAATGCTGAAGATCATGGGATATGACTGGGCAGA 1184
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1185 AAGGTGCCAGCACGTGCCCTTTGGAGTAGTACAGGGAATGAAGACTCGAAGAGGAGATGTCACTTTCCTGGAAG 1258
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1259 ATGTTTTAAATGAGATTCAATTAAGGATGCTACAGAACATGGCTTCAATTAAGACAACTAAAGAACTCAAGAAC 1332
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1333 CCACAAGAGACTGCAGAGAGGGTCGGGCTCGCAGCACTCATTATTCAGGACTTCAAAGGTTTACTCTTATCTGA 1406
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1407 CTACAAGTTCAGCTGGGATCGTGTTTTCCAGAGTCGCGGGGACACAGGAGTCTTCCTACAGTACACACACGCCC 1480
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1481 GCCTCCACAGGGATCATCAAGTGTGCTTCTGCTTATCAAAATGGCTATTAGCATTTTTGCTGCCCAGTAGAGTC 1554
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1555 AACAGTCCAGTAGCTGCCTTCTGCCTCTAGACTTTTCCCAAAGGTTCGACGAGGTGCTTTATAAATCATCTCAG 1628
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1629 GACTTTCAACCCAGGCATATCGTCAGTTACCTTCTAACTTTAAGTCATCTTGCAGCTGTGGCACACAAAACACT 1702
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1703 ACAAATAAAAGATAGTCCTCCTGAAGTGGCTGGGGCCAGACTTCATCTTTTCAAAGCTGTCCGTTCTGTCCTAG 1776
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1777 CCAATGGAATGAAACTTCTTGGAATAACACCTGTATGTAGGATGTAATTTCCATTAAAATGGCTTTTAAAATGT 1850
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1851 CAAGTGAATTCTAGTTATCTATTCTGAGATGCCTTGCTGTTCAGAATAAATTTAAATTTTTTTTTTTTTTTTTT 1924
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1925 GAGATGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGTGATGTTGGCTCACTGCAACCTCCACCTC 1998
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 1999 CCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCACGTGCCATCACGCCAGGCT 2072
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2073 AATTTTGTATTTTTAGTAGAGACAGGGTTTCTCTATGTTGGTCAGGCTGGTCTTGCACTCCCGACCTCAGGTTA 2146
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2147 TCTGTCTGCCTTGGCCTCCCAAAGTGTTGGGATTAGAGGCATGAACCACCACGCCCAGCCAAAGTTAAACTATT 2220
Query 1078 -------------------------------------------------------------------------- 1077
Sbjct 2221 ATTCTGTGTCAGAATCTGTATTAAATGTGACTTGTCAAGTTATTCAGTCTTTATCCTTAAATAAATGAGTTATC 2294
Query 1078 ------- 1077
Sbjct 2295 TGAATTC 2301
