Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12328
- Subject:
- NR_104461.2
- Aligned Length:
- 4508
- Identities:
- 993
- Gaps:
- 3515
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTCTGTAAACGCTGGCTTGTGACAGGGAGGGGGAGGAGGAAGGCCTTCGTAAAGGTTGCATCTCCGTCCCTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTCCCGGGGACCCGCGGGAAAAAAAAAAATCCAACACCCAGGCCCCGCGGCTAGCCCCTTCCCACAGGCTCTC 148
Query 1 -------------------------------------------ATGTTTCACAAAGCAGAAGAATTATTTTCTA 31
|||||||||||||||||||||||||||||||
Sbjct 149 TCCGCTCGATTTTGTCACCGTTATGTGGGAAGCGAATCCAGAGATGTTTCACAAAGCAGAAGAATTATTTTCTA 222
Query 32 AAACAACAAACAATGAAGTGGATGACATGGACACGTCAGATACCCAGTGGGGCTGGTTTTACTTGGCAGAATGT 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAACAACAAACAATGAAGTGGATGACATGGACACGTCAGATACCCAGTGGGGCTGGTTTTACTTGGCAGAATGT 296
Query 106 GGGAAGTGGCACATGTTTCAGCCGGATACCAACAGTCAGTGTTCAGTTAGCAGTGAAGATATCGAAAAAAGCTT 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGGAAGTGGCACATGTTTCAGCCGGATACCAACAGTCAGTGTTCAGTTAGCAGTGAAGATATCGAAAAAAGCTT 370
Query 180 CAAAACAAACCCTTGTGGCTCCATTTCTTTTACTACTTCCAAATTCAGCTACAAGATAGACTTTGCAGAAATGA 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAAAACAAACCCTTGTGGCTCCATTTCTTTTACTACTTCCAAATTCAGCTACAAGATAGACTTTGCAGAAATGA 444
Query 254 AGCAAATGAATCTCACCACTGGAAAGCAGCGCTTAATAAAAAGAGCCCCCTTTTCTATCAGTGCTTTCAGTTAC 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGCAAATGAATCTCACCACTGGAAAGCAGCGCTTAATAAAAAGAGCCCCCTTTTCTATCAGTGCTTTCAGTTAC 518
Query 328 ATCTGTGAAAACGAGGCCATCCCTATGCCACCACACTGGGAGAATGTGAATACTCAAGTACCATATCAGCTTAT 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATCTGTGAAAACGAGGCCATCCCTATGCCACCACACTGGGAGAATGTGAATACTCAAGTACCATATCAGCTTAT 592
Query 402 TCCTCTGCACAATCAAACACATGAATATAATGAAGTTGCTAATCTCTTTGGGAAGACGATGGATCGCAACCGAA 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCCTCTGCACAATCAAACACATGAATATAATGAAGTTGCTAATCTCTTTGGGAAGACGATGGATCGCAACCGAA 666
Query 476 TTAAAAGAATTCAGAGAATTCAAAACCTAGATTTGTGGGAGTTCTTTTGCA----------------------- 526
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTAAAAGAATTCAGAGAATTCAAAACCTAGATTTGTGGGAGTTCTTTTGCAGATACAGGTGAAGTGTTTACTCC 740
Query 527 ------------------------------------GGAAAAAGGCTCAGCTCAAGAAAAAAAGAGGTGTGCCT 564
||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATCCCTGTCCTACTCTCCTTCTTTCCTCCTGAGATTGGAAAAAGGCTCAGCTCAAGAAAAAAAGAGGTGTGCCT 814
Query 565 CAGATTAATGAACAAATGCTGTTTCATGGTACCAGCAGTGAATTTGTGGAAGCAATCTGCATTCATAACTTTGA 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAGATTAATGAACAAATGCTGTTTCATGGTACCAGCAGTGAATTTGTGGAAGCAATCTGCATTCATAACTTTGA 888
Query 639 TTGGAGAATAAATGGTATACATGGTGCTGTCTTTGGAAAAGGAACCTATTTTGCTAGAGATGCTGCTTATTCCA 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTGGAGAATAAATGGTATACATGGTGCTGTCTTTGGAAAAGGAACCTATTTTGCTAGAGATGCTGCTTATTCCA 962
Query 713 GTCGTTTCTGCAAAGATGACATAAAGCATGGGAACACATTCCAAATTCATGGTGTCAGCTTGCAACAGCGGCAT 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GTCGTTTCTGCAAAGATGACATAAAGCATGGGAACACATTCCAAATTCATGGTGTCAGCTTGCAACAGCGGCAT 1036
Query 787 CTGTTTAGAACATATAAATCTATGTTTCTTGCTCGAGTGCTAATTGGAGATTACATAAACGGAGACTCCAAATA 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTGTTTAGAACATATAAATCTATGTTTCTTGCTCGAGTGCTAATTGGAGATTACATAAACGGAGACTCCAAATA 1110
Query 861 CATGCGACCTCCTTCCAAAGACGGGAGCTATGTGAATTTATATGACAGCTGTGTGGATGATACCTGGAACCCAA 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CATGCGACCTCCTTCCAAAGACGGGAGCTATGTGAATTTATATGACAGCTGTGTGGATGATACCTGGAACCCAA 1184
Query 935 AGATCTTTGTGGTTTTTGATGCCAACCAAATCTATCCTGAGTACTTGATAGACTTTCAT--------------- 993
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGATCTTTGTGGTTTTTGATGCCAACCAAATCTATCCTGAGTACTTGATAGACTTTCATTGATTTCACTTCCAA 1258
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1259 ATCTCGGTGGTCAAGGAAGCTTTATTCTTTTTTGCAGGAAGGTTTGCTCTTCAGTCATCTAGCCACTAAATGTT 1332
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1333 AATTATCTGATACTTTTGAAACAGATATGAAAAAAAGTGGCCTCCATATAAAAAGACATACTGACTTCAAGGTT 1406
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1407 GGTTTTTGTTGTTTTGTTTTTGCCTGTTTCTTGTAGTCTTGTTTGTTAAAAGTTGATATCATTGATGTTTTAAC 1480
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1481 ACATAGGGGTGAAAGATACCATTCAAAATGGAATCAGCTGAGTCTCAACTAATGTGGTCATTGAGATCTTTAAA 1554
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1555 GTTTACGTGTGTGTTATCAGGATAAATGATTTTAGTTTAAATAGACTTATTCGTATAAATGTTGAAAAAAAATA 1628
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1629 CAGACATAAATGTGTCCCTTTAGAGGAATTGATCCTTTGTAAATTGAATTCAGGTAGTAGTATCATCCACCAAT 1702
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1703 CCATCTGTTGCTTTGTTGGTCTTCTGAAGGGGGGATTTAAAACTCTGAAACAGTCTGAGCACCTTGAGAGAAAT 1776
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1777 CAGAAACAAGACAATTATTTGCAGTGCTGTCAAACAAGCCAGAAGGAGAAAATCAAGGTAGAATGCCCCACTTT 1850
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1851 CCAGTTGCCTTAGGATAGCAGGCTGCAGCCTCAGACTTGATCCTGTCATTCTCCTCTGTCTCCCACATCTGAAT 1924
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1925 TGATAATTGCTGCAAAATGTCATTAGCCTACACTTCATCCATCAGGGCTCTTGGATTCTTACACCACGACTTGC 1998
Query 994 -------------------------------------------------------------------------- 993
Sbjct 1999 TGTGCAAGGTGTTTATTGCATCTTCAAAGTGAAACTTTAAATTATTATTCAAACATTTATTTTCCTTTTGTTTT 2072
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2073 AAAAAGAGTCCCTACAATGATCACTTCTAAGATTTTTTTTTACCTTCCCCTCTGCAGCACACACAGCTATTCAA 2146
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2147 CAATGATTTCTAAAATTCATATTTCAAATTTGTATCTCTCCATTTTGAAACATTATAGAAAGCATGGGATGCTT 2220
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2221 GAGACAAATCTGGTTTCTCCTTTGAAGTAGCTGTTGACAACCTACTCTCTTGAAAAGTTAGATATAATTCTTAA 2294
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2295 TCATGTTTAGTGGAAATTTGTTTACCTGTTCCATCTGTTTTGCTGTTTCATTGTAAGGAAGATGAGAAGTGTTG 2368
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2369 GAACAGCTTCCCTCCCCTAAAGGTATTCTAGCAGAGGCGAGACAGCAACTTGGCGGGCATGTTGCATAGGAGTT 2442
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2443 AAGTACCAGATGGGGAATTGCCCATGTGATGGTGAAGAGTCTCTCACATTGATTTTCTTCCTTTTCTCCTCTTC 2516
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2517 TCTCCTCCTTCTCTTCTCTCCTCTTTCTCTTCTCTTCTTTCTCTTCTCTTCTGTCTTCCTCTTCCTCTTCTCTT 2590
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2591 CCTCTCCTCTTCCTCTTTCTCTCTCTTCCTTTTTCTCTTCCTCTTTCTCTTTCTCTTTCTCTTCTCTTCTCTCT 2664
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2665 CTCTTCCTTCCTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCCTCCCTCCCTC 2738
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2739 CCTCCCTCCTCCCTTTTTCTTTTTCTTTCTTTTTTTTTGGTTTGGCAGAGTCTTGCTCTGTTGCCCAGGCTGCA 2812
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2813 GTGCAGTGGTGTGATCTCGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCAATTCTCTTGCCTCAGCTTCTC 2886
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2887 CAGTTACTGGGACTACAGGTGCATACCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGGCGGGGTTTTGT 2960
Query 994 -------------------------------------------------------------------------- 993
Sbjct 2961 CATGTTGGCCAGGCTGATCTCAAACTCCTGACCTCAGGTGATCCGCCTGCCTCAGCCTTCCAAAGTGCTGAGAT 3034
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3035 TACAGGCATGAGCCGCTGTACCCGGCCTGATTTTCTATGATTCTGCCTTTAAAAGACAGCACGTATACCAAGCC 3108
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3109 TTTTTCAGAAAGCTTTTCTCTTAACTCCTTCTAATGCTGAATTTTCTCTCTATTATCCTCACCCAATTTTGGCT 3182
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3183 GAGAGTTAGTGTACACAATTTAACTTCTTAGAAAAATTCCAGTGTCTATGCTTATATTGCTCACTTGAATCATT 3256
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3257 TGAATTAGAAAGGGATCTACAAATAATAAAAGCAAAGAGTGCAGACAGATTAGGGATAGTAATTCTTAAAGTGC 3330
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3331 CATCTATCCCAGATTTCCGTTATAGACCAGCATATGTGTAATTGTGCAGTGGGAGGTAAGTAGTACCCAGGACA 3404
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3405 TTGCATGTACAATACTTTGAAACAAAGTGGCAACAAAGATTTCCTGGCTCAGGTATGCACCCCAGCTGCTGGTT 3478
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3479 TAGATGAAGTGCTGAGAATATTTAGAAAAAGCGCTTTAAAAAGCATCTAGAGATTATCATGAAAATAATTGGAG 3552
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3553 ACAAAGTCACTAGGCTGCTTTGTGAGAGGCAGCATACCATGGCTCTAAACCCGTTCACAAAAAACAATGTTAGA 3626
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3627 GACATTAGGAATTCAGGTTTTGAAAATCTTTTTTTCGATTTATTTGTAATTTACATACCAAAAAACCACATTAA 3700
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3701 AATAGTCCTCCCTTCAACATGGCTATCTTTTTTCAAGTTTTATATGCATAGCTCTCTCAGCACTTGAATGGAAA 3774
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3775 AACTGTTACAGCATTTGGGAGTTGTTTTTCTTTTAGACTTTGCAGATCTTATCTCAAGGTGACTAGGAACCCAG 3848
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3849 AGCTAAGTATCTGTGAGGCAATCTCTGCGAACGCTGAACTTACCTAGTTGGTTTCTATGAAATATGTAGAATGC 3922
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3923 ACTGCAGTAGCCATTGTAAGAAGGTACTATACCGGTTTTTTGGGGCTTGTTGTTGTTGTTTGGTCTGAGAATGT 3996
Query 994 -------------------------------------------------------------------------- 993
Sbjct 3997 ACTGCCAACCCCTCTTTTATAAGAGAGAACTGATTTTGATACATATTTTAAAATATGATAGTACAGAGTTAATG 4070
Query 994 -------------------------------------------------------------------------- 993
Sbjct 4071 GATGTTAAAATTTTATTTCTTTGTTTTGGTAAGTAGATTAAATCGAGAATCATATAATCAGTACATTTGAGAAT 4144
Query 994 -------------------------------------------------------------------------- 993
Sbjct 4145 TATATAACCAGTATATAATAATACTGGACACAACCATTTGCCATCTTTTCCTGTTATCATCCCATAGAGTGGGT 4218
Query 994 -------------------------------------------------------------------------- 993
Sbjct 4219 GGGGAGAATGAATAGACATAAACCTAGAATAATGATAAATGGTTTTTAAAACTCTATATTGAATACATTCCAGC 4292
Query 994 -------------------------------------------------------------------------- 993
Sbjct 4293 TGATAATGACTTTTCTTTTTCACCTTGGTGATATCAGCCTCAGGGTAAAAAAAAAAGTTTCATAAATCTTTTAG 4366
Query 994 -------------------------------------------------------------------------- 993
Sbjct 4367 TTATAAACAGGAAAGTTTTATATTAGTGTGTCATTTCATTTCTAGACTGTTGATGGTGATGATGATAAAGAATT 4440
Query 994 -------------------------------------------------------------------- 993
Sbjct 4441 TGGAGCCAATTTTGATATATGAATGTATTGCTTTTACATGTGATGATTAAAGCTCTCCATTAGCAGTT 4508
