Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12328
Subject:
XM_017321286.1
Aligned Length:
1017
Identities:
493
Gaps:
441

Alignment

Query    1  ---------------------ATGTTTCACAAAGCAGAAGAATTATTTTCTAAAACAACAAACAATGAAGTGGA  53
                                 |||||||||||..||||.||.||.|||.|.||.|..|||.|||..||.|||||
Sbjct    1  ATGTGGGAAGCGAATCCGAAGATGTTTCACAAGACAGAGGAGTTCTTTCCCAAGAAGACAGACAGCGATGTGGA  74

Query   54  TGACATGGACACGTCAGATACCCAGTGGGGCTGGTTTTACTTGGCAGAATGTGGGAAGTGGCACATGTTTCAGC  127
            .|||||||||||.||.||.||.||||||||||||||.|||.||||.||||||||||||||||||||||||||||
Sbjct   75  CGACATGGACACATCGGACACACAGTGGGGCTGGTTCTACCTGGCGGAATGTGGGAAGTGGCACATGTTTCAGC  148

Query  128  CGGATACCAACAGTCAGTGTTCAGTTAGCAGTGAAGATATCGAAAAAAGCTTCAAAACAAACCCTTGTGGCTCC  201
            ||||||||||||.|||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CGGATACCAACATTCAATGTTCAGTTAGCAGTGAAGATATCGAAAAAAGCTTCAAAACAAACCCTTGTGGCTCC  222

Query  202  ATTTCTTTTACTACTTCCAAATTCAGCTACAAGATAGACTTTGCAGAAATGAAGCAAATGAATCTCACCACTGG  275
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||...||||||
Sbjct  223  ATTTCCTTTACTACTTCCAAATTCAGCTACAAGATAGACTTTGCAGAAATGAAGCAGATGAATCTTGTCACTGG  296

Query  276  AAAGCAGCGCTTAATAAAAAGAGCCCCCTTTTCTATCAGTGCTTTCAGTTACATCTGTGAAAACGAGGCCATCC  349
            .||.||||||.|||||||.||.||.||.||.||.||||||||.|||||||||||||||||.||.||||||||||
Sbjct  297  GAAACAGCGCCTAATAAAGAGGGCTCCTTTCTCCATCAGTGCCTTCAGTTACATCTGTGAGAATGAGGCCATCC  370

Query  350  CTATGCCACCACACTGGGAGAATGTGAATACTCAAGTACCATATCAGCTTATTCCTCTGCACAATCAAACACAT  423
            |.||||||.|.|||||||||||.|||||..||.|.||.||.||.|||||..||.|.|||||.||.||.||.||.
Sbjct  371  CCATGCCAACCCACTGGGAGAACGTGAACCCTGACGTTCCCTACCAGCTGGTTTCCCTGCAGAACCAGACGCAC  444

Query  424  GAATATAATGAAGTTGCTAATCTCTTTGGGAAGACGATGGATCGCAACCGAATTAAAAGAATTCAGAGAATTCA  497
            ||.|||||||||||.||.|.|||.||||||||.||.||||||||.||||||||||||||.|||||.||.||.||
Sbjct  445  GAGTATAATGAAGTGGCCAGTCTTTTTGGGAAAACAATGGATCGGAACCGAATTAAAAGGATTCAAAGGATCCA  518

Query  498  AAACCTAGATTTGTGGGAGTTCTTTTGCAGGAAAAAGGCTCAGCTCAAGAAAAAAAGAGGTGTGCCTCAGATTA  571
            ||||.||||.||.||||||||||||||||||                              ||.|         
Sbjct  519  AAACTTAGACTTATGGGAGTTCTTTTGCAGG------------------------------GTAC---------  553

Query  572  ATGAACAAATGCTGTTTCATGGTACCAGCAGTGAATTTGTGGAAGCAATCTGCATTCATAACTTTGATTGGAGA  645
                         ||.||.|||.|||        .||.||||           .|||           ||||| 
Sbjct  554  -------------GTGTCCTGGGACC--------GTTGGTGG-----------GTTC-----------TGGAG-  583

Query  646  ATAAATGGTATACATGGTGCTGTCTTTGGA--AAAGG-AACCTATTTTGCTAGAGATGCTGCTTATTCCAGTCG  716
                       |||              ||  ||||| ||||                                
Sbjct  584  -----------ACA--------------GATCAAAGGCAACC--------------------------------  600

Query  717  TTTCTGCAAAGATGACATAAAGCATGGGAACACATTCCAAATTCATGGTGTCAGCTTGCAACAGCGGCATCTGT  790
                                                                                      
Sbjct  601  --------------------------------------------------------------------------  600

Query  791  TTAGAACATATAAATCTATGTTTCTTGCTCGAGTGCTAATTGGAGATTACATAAACGGAGACTCCAAATACATG  864
                                                                                      
Sbjct  601  --------------------------------------------------------------------------  600

Query  865  CGACCTCCTTCCAAAGACGGGAGCTATGTGAATTTATATGACAGCTGTGTGGATGATACCTGGAACCCAAAGAT  938
                                                                                      
Sbjct  601  --------------------------------------------------------------------------  600

Query  939  CTTTGTGGTTTTTGATGCCAACCAAATCTATCCTGAGTACTTGATAGACTTTCAT  993
                                                                   
Sbjct  601  -------------------------------------------------------  600