Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12329
- Subject:
- NR_104461.2
- Aligned Length:
- 4509
- Identities:
- 690
- Gaps:
- 3814
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTCTGTAAACGCTGGCTTGTGACAGGGAGGGGGAGGAGGAAGGCCTTCGTAAAGGTTGCATCTCCGTCCCTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTCCCGGGGACCCGCGGGAAAAAAAAAAATCCAACACCCAGGCCCCGCGGCTAGCCCCTTCCCACAGGCTCTC 148
Query 1 -------------------------------------------ATGTTTCACAAAGCAGAAGAATTATTTTCTA 31
|||||||||||||||||||||||||||||||
Sbjct 149 TCCGCTCGATTTTGTCACCGTTATGTGGGAAGCGAATCCAGAGATGTTTCACAAAGCAGAAGAATTATTTTCTA 222
Query 32 AAACAACAAACAATGAAGTGGATGACATGGACACGTCAGATACCCAGTGGGGCTGGTTTTACTTGGCAGAATGT 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAACAACAAACAATGAAGTGGATGACATGGACACGTCAGATACCCAGTGGGGCTGGTTTTACTTGGCAGAATGT 296
Query 106 GGGAAGTGGCACATGTTTCAGCCGGATACCAACAGTCAGTGTTCAGTTAGCAGTGAAGATATCGAAAAAAGCTT 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGGAAGTGGCACATGTTTCAGCCGGATACCAACAGTCAGTGTTCAGTTAGCAGTGAAGATATCGAAAAAAGCTT 370
Query 180 CAAAACAAACCCTTGTGGCTCCATTTCTTTTACTACTTCCAAATTCAGCTACAAGATAGACTTTGCAGAAATGA 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CAAAACAAACCCTTGTGGCTCCATTTCTTTTACTACTTCCAAATTCAGCTACAAGATAGACTTTGCAGAAATGA 444
Query 254 AGCAAATGAATCTCACCACTGGAAAGCAGCGCTTAATAAAAAGAGCCCCCTTTTCTATCAGTGCTTTCAGTTAC 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGCAAATGAATCTCACCACTGGAAAGCAGCGCTTAATAAAAAGAGCCCCCTTTTCTATCAGTGCTTTCAGTTAC 518
Query 328 ATCTGTGAAAACGAGGCCATCCCTATGCCACCACACTGGGAGAATGTGAATACTCAAGTACCATATCAGCTTAT 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 ATCTGTGAAAACGAGGCCATCCCTATGCCACCACACTGGGAGAATGTGAATACTCAAGTACCATATCAGCTTAT 592
Query 402 TCCTCTGCACAATCAAACACATGAATATAATGAAGTTGCTAATCTCTTTGGGAAGACGATGGATCGCAACCGAA 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 TCCTCTGCACAATCAAACACATGAATATAATGAAGTTGCTAATCTCTTTGGGAAGACGATGGATCGCAACCGAA 666
Query 476 TTAAAAGAATTCAGAGAATTCAAAACCTAGATTTGTGGGAGTTCTTTTGCA----------------------- 526
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TTAAAAGAATTCAGAGAATTCAAAACCTAGATTTGTGGGAGTTCTTTTGCAGATACAGGTGAAGTGTTTACTCC 740
Query 527 ------------------------------------GGAAAAAGGCTCAGCTCAAGAAAAAAAGAGGTGTGCCT 564
||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATCCCTGTCCTACTCTCCTTCTTTCCTCCTGAGATTGGAAAAAGGCTCAGCTCAAGAAAAAAAGAGGTGTGCCT 814
Query 565 CAGATTAATGAACAAATGCTGTTTCATGGTACCAGCAGTGAATTTGTGGAAGCAATCTGCATTCATAACTTTGA 638
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CAGATTAATGAACAAATGCTGTTTCATGGTACCAGCAGTGAATTTGTGGAAGCAATCTGCATTCATAACTTTGA 888
Query 639 TTGGAGAATAAATGGTATACATGGTGCTGTCTTTGGAAAAGATAACATGT--------GGAAGCTG-------- 696
||||||||||||||||||||||||||||||||||||||||| .|||.|.| .||.||||
Sbjct 889 TTGGAGAATAAATGGTATACATGGTGCTGTCTTTGGAAAAG-GAACCTATTTTGCTAGAGATGCTGCTTATTCC 961
Query 697 -------------------------------------------------------------------------- 696
Sbjct 962 AGTCGTTTCTGCAAAGATGACATAAAGCATGGGAACACATTCCAAATTCATGGTGTCAGCTTGCAACAGCGGCA 1035
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1036 TCTGTTTAGAACATATAAATCTATGTTTCTTGCTCGAGTGCTAATTGGAGATTACATAAACGGAGACTCCAAAT 1109
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1110 ACATGCGACCTCCTTCCAAAGACGGGAGCTATGTGAATTTATATGACAGCTGTGTGGATGATACCTGGAACCCA 1183
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1184 AAGATCTTTGTGGTTTTTGATGCCAACCAAATCTATCCTGAGTACTTGATAGACTTTCATTGATTTCACTTCCA 1257
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1258 AATCTCGGTGGTCAAGGAAGCTTTATTCTTTTTTGCAGGAAGGTTTGCTCTTCAGTCATCTAGCCACTAAATGT 1331
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1332 TAATTATCTGATACTTTTGAAACAGATATGAAAAAAAGTGGCCTCCATATAAAAAGACATACTGACTTCAAGGT 1405
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1406 TGGTTTTTGTTGTTTTGTTTTTGCCTGTTTCTTGTAGTCTTGTTTGTTAAAAGTTGATATCATTGATGTTTTAA 1479
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1480 CACATAGGGGTGAAAGATACCATTCAAAATGGAATCAGCTGAGTCTCAACTAATGTGGTCATTGAGATCTTTAA 1553
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1554 AGTTTACGTGTGTGTTATCAGGATAAATGATTTTAGTTTAAATAGACTTATTCGTATAAATGTTGAAAAAAAAT 1627
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1628 ACAGACATAAATGTGTCCCTTTAGAGGAATTGATCCTTTGTAAATTGAATTCAGGTAGTAGTATCATCCACCAA 1701
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1702 TCCATCTGTTGCTTTGTTGGTCTTCTGAAGGGGGGATTTAAAACTCTGAAACAGTCTGAGCACCTTGAGAGAAA 1775
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1776 TCAGAAACAAGACAATTATTTGCAGTGCTGTCAAACAAGCCAGAAGGAGAAAATCAAGGTAGAATGCCCCACTT 1849
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1850 TCCAGTTGCCTTAGGATAGCAGGCTGCAGCCTCAGACTTGATCCTGTCATTCTCCTCTGTCTCCCACATCTGAA 1923
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1924 TTGATAATTGCTGCAAAATGTCATTAGCCTACACTTCATCCATCAGGGCTCTTGGATTCTTACACCACGACTTG 1997
Query 697 -------------------------------------------------------------------------- 696
Sbjct 1998 CTGTGCAAGGTGTTTATTGCATCTTCAAAGTGAAACTTTAAATTATTATTCAAACATTTATTTTCCTTTTGTTT 2071
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2072 TAAAAAGAGTCCCTACAATGATCACTTCTAAGATTTTTTTTTACCTTCCCCTCTGCAGCACACACAGCTATTCA 2145
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2146 ACAATGATTTCTAAAATTCATATTTCAAATTTGTATCTCTCCATTTTGAAACATTATAGAAAGCATGGGATGCT 2219
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2220 TGAGACAAATCTGGTTTCTCCTTTGAAGTAGCTGTTGACAACCTACTCTCTTGAAAAGTTAGATATAATTCTTA 2293
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2294 ATCATGTTTAGTGGAAATTTGTTTACCTGTTCCATCTGTTTTGCTGTTTCATTGTAAGGAAGATGAGAAGTGTT 2367
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2368 GGAACAGCTTCCCTCCCCTAAAGGTATTCTAGCAGAGGCGAGACAGCAACTTGGCGGGCATGTTGCATAGGAGT 2441
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2442 TAAGTACCAGATGGGGAATTGCCCATGTGATGGTGAAGAGTCTCTCACATTGATTTTCTTCCTTTTCTCCTCTT 2515
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2516 CTCTCCTCCTTCTCTTCTCTCCTCTTTCTCTTCTCTTCTTTCTCTTCTCTTCTGTCTTCCTCTTCCTCTTCTCT 2589
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2590 TCCTCTCCTCTTCCTCTTTCTCTCTCTTCCTTTTTCTCTTCCTCTTTCTCTTTCTCTTTCTCTTCTCTTCTCTC 2663
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2664 TCTCTTCCTTCCTTCTTTCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCCCTCCCTCCCT 2737
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2738 CCCTCCCTCCTCCCTTTTTCTTTTTCTTTCTTTTTTTTTGGTTTGGCAGAGTCTTGCTCTGTTGCCCAGGCTGC 2811
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2812 AGTGCAGTGGTGTGATCTCGGCTCACTGCAACCTCCACCTCCCGGGTTCAAGCAATTCTCTTGCCTCAGCTTCT 2885
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2886 CCAGTTACTGGGACTACAGGTGCATACCACCATGCCCGGCTAATTTTTGTATTTTTAGTAGAGGCGGGGTTTTG 2959
Query 697 -------------------------------------------------------------------------- 696
Sbjct 2960 TCATGTTGGCCAGGCTGATCTCAAACTCCTGACCTCAGGTGATCCGCCTGCCTCAGCCTTCCAAAGTGCTGAGA 3033
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3034 TTACAGGCATGAGCCGCTGTACCCGGCCTGATTTTCTATGATTCTGCCTTTAAAAGACAGCACGTATACCAAGC 3107
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3108 CTTTTTCAGAAAGCTTTTCTCTTAACTCCTTCTAATGCTGAATTTTCTCTCTATTATCCTCACCCAATTTTGGC 3181
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3182 TGAGAGTTAGTGTACACAATTTAACTTCTTAGAAAAATTCCAGTGTCTATGCTTATATTGCTCACTTGAATCAT 3255
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3256 TTGAATTAGAAAGGGATCTACAAATAATAAAAGCAAAGAGTGCAGACAGATTAGGGATAGTAATTCTTAAAGTG 3329
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3330 CCATCTATCCCAGATTTCCGTTATAGACCAGCATATGTGTAATTGTGCAGTGGGAGGTAAGTAGTACCCAGGAC 3403
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3404 ATTGCATGTACAATACTTTGAAACAAAGTGGCAACAAAGATTTCCTGGCTCAGGTATGCACCCCAGCTGCTGGT 3477
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3478 TTAGATGAAGTGCTGAGAATATTTAGAAAAAGCGCTTTAAAAAGCATCTAGAGATTATCATGAAAATAATTGGA 3551
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3552 GACAAAGTCACTAGGCTGCTTTGTGAGAGGCAGCATACCATGGCTCTAAACCCGTTCACAAAAAACAATGTTAG 3625
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3626 AGACATTAGGAATTCAGGTTTTGAAAATCTTTTTTTCGATTTATTTGTAATTTACATACCAAAAAACCACATTA 3699
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3700 AAATAGTCCTCCCTTCAACATGGCTATCTTTTTTCAAGTTTTATATGCATAGCTCTCTCAGCACTTGAATGGAA 3773
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3774 AAACTGTTACAGCATTTGGGAGTTGTTTTTCTTTTAGACTTTGCAGATCTTATCTCAAGGTGACTAGGAACCCA 3847
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3848 GAGCTAAGTATCTGTGAGGCAATCTCTGCGAACGCTGAACTTACCTAGTTGGTTTCTATGAAATATGTAGAATG 3921
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3922 CACTGCAGTAGCCATTGTAAGAAGGTACTATACCGGTTTTTTGGGGCTTGTTGTTGTTGTTTGGTCTGAGAATG 3995
Query 697 -------------------------------------------------------------------------- 696
Sbjct 3996 TACTGCCAACCCCTCTTTTATAAGAGAGAACTGATTTTGATACATATTTTAAAATATGATAGTACAGAGTTAAT 4069
Query 697 -------------------------------------------------------------------------- 696
Sbjct 4070 GGATGTTAAAATTTTATTTCTTTGTTTTGGTAAGTAGATTAAATCGAGAATCATATAATCAGTACATTTGAGAA 4143
Query 697 -------------------------------------------------------------------------- 696
Sbjct 4144 TTATATAACCAGTATATAATAATACTGGACACAACCATTTGCCATCTTTTCCTGTTATCATCCCATAGAGTGGG 4217
Query 697 -------------------------------------------------------------------------- 696
Sbjct 4218 TGGGGAGAATGAATAGACATAAACCTAGAATAATGATAAATGGTTTTTAAAACTCTATATTGAATACATTCCAG 4291
Query 697 -------------------------------------------------------------------------- 696
Sbjct 4292 CTGATAATGACTTTTCTTTTTCACCTTGGTGATATCAGCCTCAGGGTAAAAAAAAAAGTTTCATAAATCTTTTA 4365
Query 697 -------------------------------------------------------------------------- 696
Sbjct 4366 GTTATAAACAGGAAAGTTTTATATTAGTGTGTCATTTCATTTCTAGACTGTTGATGGTGATGATGATAAAGAAT 4439
Query 697 --------------------------------------------------------------------- 696
Sbjct 4440 TTGGAGCCAATTTTGATATATGAATGTATTGCTTTTACATGTGATGATTAAAGCTCTCCATTAGCAGTT 4508
