Nucleotide Global Alignment

Description

• Query: ccsbBroad304_12396
• Subject: XM_011514775.2
• Aligned Length: 1114
• Identities: 835
• Gaps: 242

Alignment

Query    1  ATGAAGAAAAAGAAATACGTGAATTCTGGCACAGTCACCCTGCTTTCCTTTGCTGTGGAGTCAGAGTGCACCTT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAAGAAAAAGAAATACGTGAATTCTGGCACAGTCACCCTGCTTTCCTTTGCTGTGGAGTCAGAGTGCACCTT  74

Query   75  CCTTGACTACATCAAAGGAGGGACCCAGATCAACTTCACTGTGGCCATTGATTTCACTGCCTCCAATGGGAACC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCTTGACTACATCAAAGGAGGGACCCAGATCAACTTCACTGTGGCCATTGATTTCACTGCCTCCAATGGGAACC  148

Query  149  CCTCACAGTCCACATCCCTGCACTACATGAGCCCCTACCAGCTGAACGCCTACGCGCTGGCGCTGACTGCCGTC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCTCACAGTCCACATCCCTGCACTACATGAGCCCCTACCAGCTGAACGCCTACGCGCTGGCGCTGACTGCCGTC  222

Query  223  GGAGAGATCATCCAGCACTACGACAGTGACAAGATGTTCCCTGCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GGAGAGATCATCCAGCACTACGACAGTGACAAGATGTTCCCTGCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGA  296

Query  297  TGGCAGAGTGTCCCACGAGTTCCCACTGAATGGCAACCAGGAGAACCCCTCATGCTGCGGCATCGACGGCATCC  370
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||
Sbjct  297  TGGCAGAGTGTCCCACGAGTTCCCACTGAATGGCAACCAGGAGAACCCCTCATGCTGTGGCATCGACGGCATCC  370

Query  371  TGGAGGCCTACCACCGCAGCCTGCGCACTGTGCAGCTGTACGGCCCCACCAACTTTGCCCCCGTGGTCACCCAC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TGGAGGCCTACCACCGCAGCCTGCGCACTGTGCAGCTGTACGGCCCCACCAACTTTGCCCCCGTGGTCACCCAC  444

Query  445  GTGGCCAGGAATGCAGCGGCCGTGCAGGATGGCTCCCAGTACTCGGTGCTGCTCATCATTACTGATGGGGTCAT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GTGGCCAGGAATGCAGCGGCCGTGCAGGATGGCTCCCAGTACTCGGTGCTGCTCATCATTACTGATGGGGTCAT  518

Query  519  CTCGGACATGGCGCAGACCAAGGAGGCCATTGTCAACGCTGCCAAGCTCCCCATGTCCATCATTATCGTCGGCG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTCGGACATGGCGCAGACCAAGGAGGCCATTGTCAACGCTGCCAAGCTCCCCATGTCCATCATTATCGTCGGCG  592

Query  593  TGGGCCAGGCAGAGTTCGACGCCATGGTGGAGCTGGATGGCGACGACGTGCGGATCTCCTCCCGGGGGAAGCTG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGGGCCAGGCAGAGTTCGACGCCATGGTGGAGCTGGATGGCGACGACGTGCGGATCTCCTCCCGGGGGAAGCTG  666

Query  667  GCTGAACGCGACATCGTCCAG-------------TTTGTACCCTTCC----GGGA-------------------  704
            |||||||||||||||||||||             .|||   |||.||    ||||                   
Sbjct  667  GCTGAACGCGACATCGTCCAGGTGAAGCCCAGGCCTTG---CCTGCCCCATGGGAAATTCAAGAGCCCCTCTAG  737

Query  705  CTACGTGGACCGCACA-----------GGCAACCACGTGCTGAGCATGGCCC---------GC-CTG---GCCC  754
            |.|.|.|||||.||||           |||..|  |.||.|||  |.|||||         || |||   ||||
Sbjct  738  CCAGGCGGACCTCACACCCCCTTTGGGGGCTTC--CCTGGTGA--AGGGCCCAGAAGGGAGGCACTGGGAGCCC  807

Query  755  GAGACGTG---CTGGCA----------------GAGATC---CCT-GACCAACTGGTGT---------------  790
            .| |.|||   |.|.||                ||| ||   ||| |.|||  ||.|||               
Sbjct  808  CA-AAGTGGCCCAGCCACCACCGAAGGGAGTAGGAG-TCAGTCCTCGGCCA--TGCTGTGGTCTGGGCTGGGCC  877

Query  791  --CCT-----ACATGAAGGCACAGGG------------CATTCGCCCGCGTCCCCCACCCG----CAGCACCAA  841
              |||     ||||       |.|||            ||||   .||.||.|||..||.|    |||    ||
Sbjct  878  CCCCTCTGTCACAT-------CTGGGACACACTCCTAACATT---GCGGGTGCCCAGCCAGAGGCCAG----AA  937

Query  842  CCCACT---CGCCCTCGCAGTCCCCAGCCCGCACGCCCCCTG----------CGTCC-------------CCCC  889
            |||.||   .|||||     |||.|||||..|| |.||.|||          |||.|             ||||
Sbjct  938  CCCTCTGCCAGCCCT-----TCCTCAGCCTCCA-GGCCTCTGTGGTCAGCCTCGTTCTGGTTTTTTTCTGCCCC  1005

Query  890  T-----GCACACGCA------------------CATC-------------------------------------  903
            |     ||..|.|||                  ||.|                                     
Sbjct 1006  TTGAAGGCTGAGGCAGTGTCTTTAGTGTTGCTGCAGCCTTCTCCAAGAATAGGCATTGCTCGGTTAACTGAATC  1079

Query  904  ----  903
                
Sbjct 1080  AATG  1083