Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12430
- Subject:
- NR_104448.1
- Aligned Length:
- 5416
- Identities:
- 458
- Gaps:
- 4957
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAACAGCCCCCACCCTGGAAGCCTCAGGTGCCTTCCTTCCTCCCCTTGGTGGGGTGAGGACGACCGGGATGAGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGTCTGAGAAGCACTTTGAGGGGGGAGGAGCTGAAGGCCACACCTGGAAGGGCGATTTATTCCTTGGGCGCTGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGTGTCTGCCGCCTTCACCCAGAAACCGATGATGTTCGGAGCCAGTGGGATCTTGTGTGTGATAATGCCTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGGTCCATATCGCTAAGTTCTCCTTACTGGTTGGATTAATCTTTGGCTACCTAATAACTGGATGCATTGCTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGGGTCGGCCGGCGGCCTGTGCTGCTGTTTTCCATCATCTTCATTCTGATCTTTGGACTGACTGTGGCACTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAGTGAATGTGACAATGTTCAGCACACTCAGGTTCTTTGAAGGATTTTGCCTGGCTGGAATCATTCTCACCTTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TATGCTTTACGAATAGAGCTGTGCCCCCCTGGAAAACGGTTCATGATTACGATGGTGGCGAGCTTCGTGGCCAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGCGGGCCAGTTCCTCATGCCTGGGCTAGCCGCCCTGTGCCGGGATTGGCAGGTGCTGCAGGCCCTCATCATCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCCCTTCCTGCTCATGCTGCTCTACTGGTCGTATTACCTGTGGCTGCTTTCTGGCTATTCACAGAGTTGAGTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATGCAGCAGGATATTCCCCGAGTCCCTCCGGTGGCTAATGGCCACCCAGCAGTTTGAGTCTGCAAAGAGGCTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATCCTCCACTTCACACAGAAGAATCGCATGAACCCTGAGGGCGACATCAAGGGTGTGATACCAGAGCTGGAGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAGCTTTCCCGGAGGCCCAAGAAGGTCTGCATCGTGAAGGTGGTGGGGACACGGAACCTGTGGAAGAACATTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGGTCCTGTGTGTGAACTCGCTGACGGGGTACGGGATCCACCACTGCTTTGCCAGGAGCATGATGGGCCACGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GTGAAGGTGCCGCTCCTGGAGAACTTCTATGCTGACTACTATACCACGGCCAGCATCGCGCTGGTGTCCTGCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCCATGTGCGTGGTGGTCCGATTCCTCGGGCGCAGGGGAGGGCTGCTGCTCTTCATGATCCTCACCGCCCTGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTCACTCCTGCAGCTCGGCCTCCTCAACCTGATTGGAAAGTACAGCCAGCACCCAGACTCAGGGATGAGTGAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGCGTCAAGGACAAATTTTCCATCGCGTTTTCCATCGTGGGCATGTTTGCCTCCCATGCGGTGGGGAGCCTCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CGTGTTCTTCTGTGCGGAGATCACCCCGACGGTGATAAGGTGTGGCGGGCTGGGGCTGGTGCTGGCCAGCGCGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCTTCGGCATGCTGACGGCACCCATCATCGAGCTGCACAACCAGAAAGGCTACTTCCTGCACCACATCATCTTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCCTGCTGCACGCTCATCTGCATCATCTGCATCCTCCTGCTGCCCGAGAGCAGGGACCAGAACCTGCCTGAGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CATTTCTAACGGGGAGCACTACACGCGCCAGCCGCTGCTGCCGCACAAGAAGGGGGAGCAGCCACTGCTGCTCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCAACGCCGAGCTCAAGGACTACTCGGGCCTCCACGATGCCGCAGCCGCGGGTGACACACTGCCCGAGGGTGCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACGGCCAACGGCATGAAGGCCATGTAGCCCGGCCTGCGGAACCCGGGGCTCCAGGGTCTGGGGCAGCTTGGGCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAGGTTTACAGACCAGGGACCGAACACGCAGCCAGGGGTGGGAAAGCTGCCTCAGCCAAGCTGAGCCTCTCAAC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGGTGTGGGGAAATCCTGTCTTTCCAAAAGTCCAAGGAGCGCGGGTCGGAGGAGACAAACTCTTTGGAAATAAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCTTTCAAGACTTTCTTTTCTGCCGTTAAATGTAAGAGCTTCTGTTCGTGTGCAGGGAAAGCAGCTCACAGACG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCGTTAAAACCAGCTTCATCTTTCCTTCAGGATCATCCTTTTGTACTTGATGCTGGAAGCTCTTGGAGAAAAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTTAAACATTTCACCAGAAATCTTAATTGAGCAGCAGTCATATCGCCACAGCTTTGTGAGTACACAGCTAACAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ATGCGTCGAGACCTGAGATGTGCTCGTTTTTATTCCTCCTCTCCCAGATTGGCTCCAGCAGAAAAGTCCCTCGT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCACAGGCAGCTCTTGTGCCGGCACTACTTGAAAACATGGCTACTTTCTAAGCTACAAACCATTAGAAAATAAC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCAAAAAGATGGCAGAGGCAAATCCACAGAAGGGGGGCTGCCCTCCACACACACACGCCCGTCACCCACACCTT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GAGCACACACCATGAAGATCACCAGCTTGGATGGCCGTCACCTCAGACATCACTCCAGGGAGCACCCGCAGGAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CTGGGCCCCCTCACGCCTGCCTTCCTGGGCCAGCTTCCTGCTTGCAGTCACTCGCATAGCACAGAGGTGGGGCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TCGGGCAGGGAGCGGAGATTCCTCATAGGTGAGTCCAAATGACCTCCAGCCTCTCGAAGGCATCAAGACAAATT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GAAAGAAAGCAATAACTCACCAAAGCTCAACGCTGCCCCTGCCTCGACCTCCATGGGTCTCTTCGTGTTCCTCG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTTCACCCCAGAAAGTGGAGGTTTCCTCTTGGCATTTTCGGAGGAAACTTGTAGGACACCCAAGGCGACTAAGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GACAGCCTCCTTGGCAAGGGCAGGCACCACTTTGTAGCAACTTGGGCACCAGCTTTTCTGGACAGCCTGGCTTC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTACTGGCATTGTCCAACTCATCCCTTCTCGAAGCATGTCTTTGCCATGGGCTGTGTCCTTCCAGGGAAATTGT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GGTCTCGGGCCTGGGTGAGACAATGAAGTGACTTCCAACCGACAGTTGCTAGAATTCACAGGGCAGAAAAGGGG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TTGACCTTCTCCCCTTCTGGCTTTCCACCCGGCCTGCTGCTTGCTGTCGCCACTCATGTCTCCTCCACATGCGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TCCACACATCAGTAAGGGCCTGGAGATGTGTAAAGACACAGCAAGGGGCAAGCAGACTCTTGGCCACGTGTTTC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CAGTGGCTGGACCACGCCGACACCTGGGATCTTGAGATACCCAGGAAGGGAGGCTGTCTGGCCAGCCTCTCCCT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GCCTCCACTTGCTCCACGTCCAGCTCCTCACCTTCCCTCTTTTTTAAAGTCACATTTCCATGTTTCAACATTAG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTTGCATTCACCTTTACAAAGGCCTTTCTTTAGATCTGTGCAGCCTTTGCGTGCCAAACTTGTGAAATTCCTTT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TACCTTTTTTGGAGTACTTGCTATAAAGCCACCTGTCAACAAACCCCCATTATGTACAGAATAGGACCTATCCA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GTAGCCAGGCCAGTAGGCAGTTGGGGAAGGTGGGAAGGATCCAGCGAGGCCCCTGAGCCTGCACCTGGACAGGT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GTACGTCTGCACCCATCACCCTCAGCACCAGGCCACCCTGCAGTCCACTTACTGTACTGTGTTGTGGAAGGATA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGCTAAGTGATGAAAGTTGCGAGCAGTCTCACTGGTCGTGTAAACTTTTTTTTTTTTTTGGAAATTGAAGCTGT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 AGAGTGCTGCCCGAAATCTCTAGGAAGTTGGTGGCAAGGGACAGCACTCACACTCTTCTGGTCATGATCTCTGA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TCTCCACCTCAAATGACAATAAAAAACTGGTCCAACGAAGACACTGCTCAGCACTTCAGCCATCAGGACTAATC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CATCGATGACTGGAAAAGAGGCTAGCTTTGAGGAAAACAGCCTGGGCTCTTGGGAGCAGAGTCCAGTGGGTGTG 3774
Query 1 ----------------------------ATGGCTCTCAGCCGGCGAGGCGGTCCCACAGCTCTCCTCCCAGGGC 46
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3775 AGGCTGACTTGCCGACGGTCGGCAGGTAATGGCTCTCAGCCGGCGAGGCGGTCCCACAGCTCTCCTCCCAGGGC 3848
Query 47 AGCCTGAGGAGGAGGAGGCCGGGTGCCTGTTTGGTGGCAGCTTCAGCCTAGGGATACCTGAAGCTGTTGAGCAA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3849 AGCCTGAGGAGGAGGAGGCCGGGTGCCTGTTTGGTGGCAGCTTCAGCCTAGGGATACCTGAAGCTGTTGAGCAA 3922
Query 121 CACCTTTATGAAATGTTGCCAGAGCAGCAACACTTCCCTGTGGGCACAGCCCCGGGAAATCCGGTACCAAGTGA 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3923 CACCTTTATGAAATGTTGCCAGAGCAGCAACACTTCCCTGTGGGCACAGCCCCGGGAAATCCGGTACCAAGTGA 3996
Query 195 GCAAGGTGGCAGGACCCACCCAAGCCTGATACGCATCTGGGCCCGCCGGGCTCAGCAGGGGAGGCTGCTACGGC 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3997 GCAAGGTGGCAGGACCCACCCAAGCCTGATACGCATCTGGGCCCGCCGGGCTCAGCAGGGGAGGCTGCTACGGC 4070
Query 269 TGCCCACTTCCCAGCACCGTCTGTCAGGCTTGAACCCCTCTGTGCTGTTCCCTTCCTGGCTAATAGGGAGACCC 342
||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4071 TGCCCACTTCCCAGCACCGTCTGTCACGCTTGAACCCCTCTGTGCTGTTCCCTTCCTGGCTAATAGGGAGACCC 4144
Query 343 TTCGCAGGCACCCACTGTTTCAACTTGACCCTCCCACCCCCTGCTACTCTCCTCCACACACCCCTCCGTTCCGC 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4145 TTCGCAGGCACCCACTGTTTCAACTTGACCCTCCCACCCCCTGCTACTCTCCTCCACACACCCCTCCGTTCCGC 4218
Query 417 TAGCCTACCCTGTCAGCCTTTCAATAAAAGTTATGCACAAATG------------------------------- 459
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 4219 TAGCCTACCCTGTCAGCCTTTCAATAAAAGTTATGCACAAATGTGAACACCTGAGATGGAGCTGAACATTTCTT 4292
Query 460 -------------------------------------------------------------------------- 459
Sbjct 4293 CACTTTGTTCTTTTTCTGAAGTCAAACTCTTATCAAATGCCCTAAAATTATTACCACCCAAGAGAAACAGGAAA 4366
Query 460 -------------------------------------------------------------------------- 459
Sbjct 4367 AAGGTTACATGTTTTTGTTTACTGAGAGTAAGATCACCTGCATCTGGAAGACGGGCTGGTAAATTGGTTTGGCT 4440
Query 460 -------------------------------------------------------------------------- 459
Sbjct 4441 ACAGAACAGAAAGAAAACAAAAACAAACCTCGTAAGGGAAGTATCACACTCAGACACCACCGCTTCCTAGAGCC 4514
Query 460 -------------------------------------------------------------------------- 459
Sbjct 4515 AAATGAGCAATCCCAAACTGCAAGTGCCATAAGTGGGCCTGTGAGGTCACACCGCCCGGCCCGAGGTATCGCAT 4588
Query 460 -------------------------------------------------------------------------- 459
Sbjct 4589 GTGCGGGGGAGGTCCACACTACAGCTGTCCTCTCGTCTAGAAGGCACCACCTCGCTTTCATGTCCCGTGTGTTT 4662
Query 460 -------------------------------------------------------------------------- 459
Sbjct 4663 TGGAAAAGCAGTATGGTGTGTCATGTCTAGCGGCGAACACTTCCCTCCCTGTCCTTGAGGTTGTAATATAAAAA 4736
Query 460 -------------------------------------------------------------------------- 459
Sbjct 4737 CTGTGTTTCTGTACGTGTGGGTGGGAATTCTCTGACGGTGCTCGTTCATAGCACAAGCTTACGCTGAGTTCTGA 4810
Query 460 -------------------------------------------------------------------------- 459
Sbjct 4811 ACTGTCGTTCACAGCTGCGTGTCTGCATGGTGTCGCATCTGTTGTACCTTTGGGGAAAATTTGTATGTAAATGT 4884
Query 460 -------------------------------------------------------------------------- 459
Sbjct 4885 ACAGAAATAAAAACGTTGCCCCATTAACAGATTTCCTCTGGAATGTCTTCCCTACCTCACCTGATGGTATCCAC 4958
Query 460 -------------------------------------------------------------------------- 459
Sbjct 4959 CGAAGGGCATTTCACTACCATTAATGGTGAGTAATAAAATCCTCCGTGTTCATTCAGACCTCACTGCGTCACTA 5032
Query 460 -------------------------------------------------------------------------- 459
Sbjct 5033 CTTTGAACGCCTCTGTAAGCTGTGTCTTCACTCGCCCCGAGGTGGGTGGAGGGAGGCCTCTCACTCTGCTTCGA 5106
Query 460 -------------------------------------------------------------------------- 459
Sbjct 5107 GTCCTGGTCTTAAAGGTAGTCAGAGGCAGAGGCTGGATTAAACACACACTGTTTACCAAGTGCCACTCTCAGAC 5180
Query 460 -------------------------------------------------------------------------- 459
Sbjct 5181 CACCTGAGAGACGGGGGCCATCAGTAAAATTAAGAGGAATTTTTTTCCCTTGTTCGTGTATGTTCTGCTGATCC 5254
Query 460 -------------------------------------------------------------------------- 459
Sbjct 5255 GTGGCCTGAAGGTTCCTAGAGACGTCAAGAAATGAATATCTTACACTGTGATTCTGTGAGGAAAGACTGGTAAC 5328
Query 460 -------------------------------------------------------------------------- 459
Sbjct 5329 CCAAAACTCTCTTCTCTAATGTATTTTTTAACGAAAATGACAATATTTCTTTAATAAAGTATTTATACCAAAAA 5402
Query 460 -------------- 459
Sbjct 5403 AAAAAAAAAAAAAA 5416
