Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12482
- Subject:
- XR_428314.3
- Aligned Length:
- 2890
- Identities:
- 1034
- Gaps:
- 1855
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCCTCCGCCTAGAGCGCTGCCGCCGCCGCTTTCGCCCGGGAGCCGGGGGCCGGGCGCCATCATGCTGAGCCGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCGGGGCGCTGCTGCAGGAAGCCGTGGGGGCGCGCGAGCCCAGCATTGACCTGCTGCAGGCCTTCGTGGAGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGGAAGGGCATCACGCACTACTACATCGAGAGCACAGATGAAAGCACCCCCGCCAAGAAGACAGACATTCCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCGGCTGAAGCAGATGCTGGATATCCTGGTGTATGAAGAGCAGCAGCAGGCGGCCGCGGGTGAGGCAGGGCCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGCCTGGAGTACCTGCTGCAGCACAAGATCCTGGAGACTCTCTGCACGCTGGGCAAGGCCGAGTACCCCCCAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CATGCGGCAGCAGGTGTTCCAGTTCTTCAGCAAGGTTCTGGCGCAGGTGCAGCACCCCCTGCTGCATTACCTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCGTCCACAGGCCTGTGCAGAAACTCCTCCGACTTGGTGGGACTGCTTCCGGATCCGTTACAGAAAAGGAGGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGCAGTTCACCACCGTCCTCTGCTCCAAGATCCAGCAGGACCCAGAGCTGCTCGCCTACATCCTGGAAGGTAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAAGATTGTAGGTAGGAAGAAAGCATGCGGAGAACCCACTGCCCTGCCTAAGGACACAACCAGCCACGGGGACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGGACTGCTCCCACGATGGTGCTCCTGCCAGGCCCCAGCTGGACGGGGAGTCCTGTGGGGCCCAGGCCTTGAAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGCCACATGCCTGCTGAGACCGAGGAGCTGGACGGTGGGACCACAGAGAGCAACCTGATTACCTCCCTGCTTGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTGTGCCAGAGCAAGAAGAGTCGGGTGGCCTTGAAGGCCCAGGAGAACCTGCTGCTCCTGGTGAGCATGGCCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCCCAGCAGCTGCCACCTACCTGGTACAGAGCAGCGCCTGCTGCCCTGCGATCGTCCGGCACCTTTGCCAGTTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TACCGGTCCATGCCTGTCTTCCTGGACCCCGCAGACATTGCCACCTTAGAGGGCATCAGCTGGAGGTTACCCAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGCCCCGTCTGATGAGGCTTCCTTCCCTGGCAAGGAGGCCTTGGCTGCCTTCTTGGGCTGGTTTGATTACTGCG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACCACCTCATCACAGAGGCACACACGGTGGTTGCGGACGCCTTGGCGAAGGCTGTGGCTGAGAACTTCTTCGTG 1184
Query 1 ------------------------------------------------------------------------AT 2
||
Sbjct 1185 GAGACCCTGCAGCCCCAGCTCCTGCACGTGTCCGAGCAGAGCATCTTGACCTCCACCGCCCTCCTCACAGCCAT 1258
Query 3 GCTGCGCCAGCTTCGCTCCCCTGCGCTGCTGCGGGAGGCCGTGGCTTTCCTCCTGGGCACAGACCGGCAGCCTG 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GCTGCGCCAGCTTCGCTCCCCTGCGCTGCTGCGGGAGGCCGTGGCTTTCCTCCTGGGCACAGACCGGCAGCCTG 1332
Query 77 AAGCCCCCGGGGACAACCCCCACACCCTGTATGCTCATCTCATCGGGCATTGTGACCACCTCTCTGATGAGATC 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AAGCCCCCGGGGACAACCCCCACACCCTGTATGCTCATCTCATCGGGCATTGTGACCACCTCTCTGATGAGATC 1406
Query 151 AGCATCACCACACTCCGGCTGTTTGAGGAGCTGCTGCAGAAGCCCCACGAGGGGATCATCCACAGCCTGGTCCT 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGCATCACCACACTCCGGCTGTTTGAGGAGCTGCTGCAGAAGCCCCACGAGGGGATCATCCACAGCCTGGTCCT 1480
Query 225 GCGCAACCTTGAGGGCCGCCCTTACGTGGCCTGGGGCTCACCAGAGCCTGAGAGCTATGAGGACACCCTAGACC 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 GCGCAACCTTGAGGGCCGCCCTTACGTGGCCTGGGGCTCACCAGAGCCTGAGAGCTATGAGGACACCCTAGACC 1554
Query 299 TGGAGGAAGACCCCTACTTCACCGACAGCTTCCTGGATTCCGGCTTTCAAACTCCCGCAAAGCCTCGCCTAGCT 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TGGAGGAAGACCCCTACTTCACCGACAGCTTCCTGGATTCCGGCTTTCAAACTCCCGCAAAGCCTCGCCTAGCT 1628
Query 373 CCTGCTACCAGTTACGATGGCAAAACAGCAGTGACCGAGATCGTCAACAGTTTCCTGTGCCTGGTCCCCGAGGA 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CCTGCTACCAGTTACGATGGCAAAACAGCAGTGACCGAGATCGTCAACAGTTTCCTGTGCCTGGTCCCCGAGGA 1702
Query 447 AGCCAAGACCTCTGCCTTCCTGGAGGAGACAGGCTATGACACATACGTCCACGATGCTTATGGCCTGTTCCAGG 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGCCAAGACCTCTGCCTTCCTGGAGGAGACAGGCTATGACACATACGTCCACGATGCTTATGGCCTGTTCCAGG 1776
Query 521 AGTGCAGCTCCCGCGTCGCCTCCTGGGGCTGGCCTCTGACCCCCACACCTTTGGACCCCCATGAGCCCGAGCGA 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 AGTGCAGCTCCCGCGTCGCCTCCTGGGGCTGGCCTCTGACCCCCACACCTTTGGACCCCCATGAGCCCGAGCGA 1850
Query 595 CCTTTCTTCGAGGGCCACTTCCTCCGAGTGCTGTTTGACCGCATGTCCCGGATTCTGGAT-------------- 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CCTTTCTTCGAGGGCCACTTCCTCCGAGTGCTGTTTGACCGCATGTCCCGGATTCTGGATCAGCCCTCGGCTCT 1924
Query 655 ----------------CAGCCATACAGCCTGAACCTGCAGGTGACCTCGGTCCTGTCCCGGCTTGCCCTCTTCC 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GTCCACCATGTTCCTACAGCCATACAGCCTGAACCTGCAGGTGACCTCGGTCCTGTCCCGGCTTGCCCTCTTCC 1998
Query 713 CCCACCCCCATATTCATGAGTACCTGCTGGATCCGTACATCAGCCTGGCCCCCGGCTGCAGGAGCCTATTCTCC 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CCCACCCCCATATTCATGAGTACCTGCTGGATCCGTACATCAGCCTGGCCCCCGGCTGCAGGAGCCTATTCTCC 2072
Query 787 GTGTTGGTGAGGGTGATCGGGGACTTGATGCAGAGAATCCAGAGGGTACCCCAGTTCCCAGGCAAGCTGTTCCT 860
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 2073 GTGTTGGTGAGGGTGATCGGGGACTTGATGCAGAGAATCCAGAGGGTACCCCAGTTCCCAGGCAAGCTGCTCCT 2146
Query 861 GGTGCGCAAGCAGTTGACGGGCCAGGCTCCTGGGGAGCAGCTGGACCACCAGACCCTCCTCCAGGGCGTGGTGG 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GGTGCGCAAGCAGTTGACGGGCCAGGCTCCTGGGGAGCAGCTGGACCACCAGACCCTCCTCCAGGGCGTGGTGG 2220
Query 935 TGCTGGAGGAGTTCTGCAAGGAGCTGGCTGCCATTGCCTTCGTCAAGTTTCCCCCACATGATCCTCGCCAGAAC 1008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TGCTGGAGGAGTTCTGCAAGGAGCTGGCTGCCATTGCCTTCGTCAAGTTTCCCCCACATGATCCTCGCCAGAAC 2294
Query 1009 GTCTCCCCAGCCCCGGAAGGGCAGGTC----------------------------------------------- 1035
|||||||||||||||||||||||||||
Sbjct 2295 GTCTCCCCAGCCCCGGAAGGGCAGGTCTGAGCCAGCACCAGGGCGGTGGGAGACTCCTGTCCACACCTCTGCCC 2368
Query 1036 -------------------------------------------------------------------------- 1035
Sbjct 2369 CAGAGCTGCCTCCTGCCTGGCACTGCCGCCACACTCCCCTCCTGGGATGGGGCTTCTGCTCCCGGGCTCACTCA 2442
Query 1036 -------------------------------------------------------------------------- 1035
Sbjct 2443 AGGAGACTGCGGCATGTTGACCACACCAGACTGGGTTTCAGGGAATGGGCATGCCAGGTGCCAAGGAGCCAAAC 2516
Query 1036 -------------------------------------------------------------------------- 1035
Sbjct 2517 AGATGGCTTTCCAGGCAGCAAGGTCCTTGGGGCCTTCTTGGAGGAGCTTGGGTGACAGCCAGAAGCCAGGCACA 2590
Query 1036 -------------------------------------------------------------------------- 1035
Sbjct 2591 GGTTGCCAAGAGGTGACACGAAACAGGAGGAAACTCAGTGACCTCTGCCTCTCCCACATTCCTCCCCGCGGGGG 2664
Query 1036 -------------------------------------------------------------------------- 1035
Sbjct 2665 AGGACCTCGCCGCTCTGAAGAGCACCGTGCACATGTGGGTGCACAAACGTGGGTGTTGGTGTGGACGGGGCGCA 2738
Query 1036 -------------------------------------------------------------------------- 1035
Sbjct 2739 GATCTCCGTGGATGAACTGCGTCTGGACTCTTAGATTCATAAAATATTCGAGGGTTTGGGAGTCACAGACCCTC 2812
Query 1036 -------------------------------------------------------------------------- 1035
Sbjct 2813 CCCTCTCCTCAGTGCACTTTGGCATTTGCACGGTGTCTTCCCCGGACAGCACAGCAATAAATGGTGTGATTGCG 2886
Query 1036 ---- 1035
Sbjct 2887 TGGA 2890
