Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12574
- Subject:
- XM_017009847.1
- Aligned Length:
- 1283
- Identities:
- 878
- Gaps:
- 307
Alignment
Query 1 ATGGATCGCTACAACGTCACCACCTCCAAGCAGCTCTACACC------------GTGGCCGTCTCCTGCCTCCT 62
||| |||.| |.|.|..||.|||| |.|.|| |.||||..|..|.|||....
Sbjct 1 ATG---CGCGA----GGCCCGGCCCCCAA-------TTCCCCCAGCGAGGGAGGGAGGCCCCCGGCGGCCGGGA 60
Query 63 GCTTGCAA---------------------ACGGAGTTTCGC-------------TCTTATC-----GCCCAGGC 97
||.|||.| |||.||...||| .||..|| ||..||||
Sbjct 61 GCCTGCGAGCCGCGGCGGGACCCGAGCGCACGCAGGGGCGCGGCGACGGCGGGGGCTAGTCGGGCTGCGGAGGC 134
Query 98 TGAAGT--GCAGTGGCATGATCTCAGCTCATTGCAACC-----TCC-ACCTCC--CAGGTTCAA----GCAATT 157
.|..|| |.|||| |..|||.|.|.|.| | ||| |||.|| ||||..|.| |||
Sbjct 135 GGCCGTCGGGAGTG-------CGGAGCGCCTCGGA--CGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCA--- 196
Query 158 CTCCTGCTTCAGC----------GCCC--------CA-CCCCCCACCCACA-------------CCGCCCCAAG 199
|..|||..||.|| |||| || ||||||||.|.|| .|||||..||
Sbjct 197 CGGCTGGCTCGGCACTGGGAGGGGCCCGGCGCTCGCAGCCCCCCACGCCCAGAGAGGATGCGGTGCGCCCTGAG 270
Query 200 TAGCTG---AGACT---ACAG---------GTAAGTTCGAGGAT-------------CGGGAAGACCACGTCCC 245
|||.| ||.|| |.|| |||.| |||.||| .||||||..|.||||.|
Sbjct 271 -AGCCGGGTAGCCTCGGATAGCGGCGCTGCGTACG--CGATGATGGATGAGCCGTGGTGGGAAGGGCGCGTCGC 341
Query 246 CAAGTTGGA--------GCA-----------AATAAACAGCA-------------CGAG----------GATCC 277
| |.||| ||| ||..|||.|.| |||| ..|||
Sbjct 342 C---TCGGACGTCCACTGCACCCTGCGCGAGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCC 412
Query 278 T---GAGCAGCCAGAACTT------CACCCTCACCAAGAAGGAGCTGCTGAGCA--CA----GAGCTGCTGCTC 336
| ||||.|||.|..||| ||.|||.||| |||||||||| || .|||| |||| |
Sbjct 413 TGAAGAGCCGCCGGTTCTTCGTGGACATCCTGACC---------CTGCTGAGCAGCCACTGCCAGCT-CTGC-C 475
Query 337 CTGGAGGCCTTCAGCTGGAACC-TCTGCCTGCCCACGCCT-GCCCACTTCCTGGA---CTACTACCTCTTGGCC 405
|||.||.||..||.|||| || |||.|||| || |.|||||||.|||| ||||.||.||....||
Sbjct 476 CTGCAGCCCGGCACCTGG--CCGTCTACCTG-------CTGGACCACTTCATGGATCGCTACAACGTCACCACC 540
Query 406 TCCGTCAGCCAGAAGGACCACCACTGCCACACC-TGGCCCACCACCTGCCCCCGCAAGACCAAAGAGTGCCTCA 478
||| ||| ||.|.|| ||||| ||||| |.|.|| ||||||
Sbjct 541 TCC---------AAG---CAGCTCT---ACACCGTGGCC--------GTCTCC--------------TGCCTC- 576
Query 479 AGGAGTATGCCCATTACTTCCTAGAGGTCACCCTGCAAGATCACATATTCTACAAATTCCAGCCTTCTGTGGTC 552
|..|.||||| |||||||||||||||||||||||||||||||||||
Sbjct 577 ----------------------------CTGCTTGCAA-ATCACATATTCTACAAATTCCAGCCTTCTGTGGTC 621
Query 553 GCTGCGGCCTGTGTTGGGGCCTCCAGGATTTGCCTGCAGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGAT 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 622 GCTGCGGCCTGTGTTGGGGCCTCCAGGATTTGCCTGCAGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGAT 695
Query 627 CTCAAGCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAATCCTGCTGGTAGTGTATGACAACGTCCTCAAGG 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 696 CTCAAGCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAATCCTGCTGGTAGTGTATGACAACGTCCTCAAGG 769
Query 701 ATGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACACCCCCCACCCCCACTCAAGTGCTGTTC 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 770 ATGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACACCCCCCACCCCCACTCAAGTGCTGTTC 843
Query 775 CAGCCACCAGCCTACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCCAGACCCCCGTGCAGGACCT 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 844 CAGCCACCAGCCTACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCCAGACCCCCGTGCAGGACCT 917
Query 849 ATGCTTGGCCTATCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCC 922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 918 ATGCTTGGCCTATCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCC 991
Query 923 TCCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCAT 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 992 TCCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCAT 1065
Query 997 ATGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCTACTTCAGTGGGAGCCACAT 1070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1066 ATGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCTACTTCAGTGGGAGCCACAT 1139
Query 1071 GTTCCCCACCGGCTGCTTTGACAGA 1095
|||||||||||||||||||||||||
Sbjct 1140 GTTCCCCACCGGCTGCTTTGACAGA 1164