Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12574
Subject:
XM_017009847.1
Aligned Length:
1283
Identities:
878
Gaps:
307

Alignment

Query    1  ATGGATCGCTACAACGTCACCACCTCCAAGCAGCTCTACACC------------GTGGCCGTCTCCTGCCTCCT  62
            |||   |||.|    |.|.|..||.||||       |.|.||            |.||||..|..|.|||....
Sbjct    1  ATG---CGCGA----GGCCCGGCCCCCAA-------TTCCCCCAGCGAGGGAGGGAGGCCCCCGGCGGCCGGGA  60

Query   63  GCTTGCAA---------------------ACGGAGTTTCGC-------------TCTTATC-----GCCCAGGC  97
            ||.|||.|                     |||.||...|||             .||..||     ||..||||
Sbjct   61  GCCTGCGAGCCGCGGCGGGACCCGAGCGCACGCAGGGGCGCGGCGACGGCGGGGGCTAGTCGGGCTGCGGAGGC  134

Query   98  TGAAGT--GCAGTGGCATGATCTCAGCTCATTGCAACC-----TCC-ACCTCC--CAGGTTCAA----GCAATT  157
            .|..||  |.||||       |..|||.|.|.|.|  |     ||| |||.||  ||||..|.|    |||   
Sbjct  135  GGCCGTCGGGAGTG-------CGGAGCGCCTCGGA--CGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCA---  196

Query  158  CTCCTGCTTCAGC----------GCCC--------CA-CCCCCCACCCACA-------------CCGCCCCAAG  199
            |..|||..||.||          ||||        || ||||||||.|.||             .|||||..||
Sbjct  197  CGGCTGGCTCGGCACTGGGAGGGGCCCGGCGCTCGCAGCCCCCCACGCCCAGAGAGGATGCGGTGCGCCCTGAG  270

Query  200  TAGCTG---AGACT---ACAG---------GTAAGTTCGAGGAT-------------CGGGAAGACCACGTCCC  245
             |||.|   ||.||   |.||         |||.|  |||.|||             .||||||..|.||||.|
Sbjct  271  -AGCCGGGTAGCCTCGGATAGCGGCGCTGCGTACG--CGATGATGGATGAGCCGTGGTGGGAAGGGCGCGTCGC  341

Query  246  CAAGTTGGA--------GCA-----------AATAAACAGCA-------------CGAG----------GATCC  277
            |   |.|||        |||           ||..|||.|.|             ||||          ..|||
Sbjct  342  C---TCGGACGTCCACTGCACCCTGCGCGAGAAGGAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCC  412

Query  278  T---GAGCAGCCAGAACTT------CACCCTCACCAAGAAGGAGCTGCTGAGCA--CA----GAGCTGCTGCTC  336
            |   ||||.|||.|..|||      ||.|||.|||         ||||||||||  ||    .|||| |||| |
Sbjct  413  TGAAGAGCCGCCGGTTCTTCGTGGACATCCTGACC---------CTGCTGAGCAGCCACTGCCAGCT-CTGC-C  475

Query  337  CTGGAGGCCTTCAGCTGGAACC-TCTGCCTGCCCACGCCT-GCCCACTTCCTGGA---CTACTACCTCTTGGCC  405
            |||.||.||..||.||||  || |||.||||       || |.|||||||.||||   ||||.||.||....||
Sbjct  476  CTGCAGCCCGGCACCTGG--CCGTCTACCTG-------CTGGACCACTTCATGGATCGCTACAACGTCACCACC  540

Query  406  TCCGTCAGCCAGAAGGACCACCACTGCCACACC-TGGCCCACCACCTGCCCCCGCAAGACCAAAGAGTGCCTCA  478
            |||         |||   ||.|.||   ||||| |||||        |.|.||              |||||| 
Sbjct  541  TCC---------AAG---CAGCTCT---ACACCGTGGCC--------GTCTCC--------------TGCCTC-  576

Query  479  AGGAGTATGCCCATTACTTCCTAGAGGTCACCCTGCAAGATCACATATTCTACAAATTCCAGCCTTCTGTGGTC  552
                                        |..|.||||| |||||||||||||||||||||||||||||||||||
Sbjct  577  ----------------------------CTGCTTGCAA-ATCACATATTCTACAAATTCCAGCCTTCTGTGGTC  621

Query  553  GCTGCGGCCTGTGTTGGGGCCTCCAGGATTTGCCTGCAGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGAT  626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  622  GCTGCGGCCTGTGTTGGGGCCTCCAGGATTTGCCTGCAGCTTTCTCCCTACTGGACCAGAGACCTGCAGAGGAT  695

Query  627  CTCAAGCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAATCCTGCTGGTAGTGTATGACAACGTCCTCAAGG  700
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  696  CTCAAGCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAATCCTGCTGGTAGTGTATGACAACGTCCTCAAGG  769

Query  701  ATGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACACCCCCCACCCCCACTCAAGTGCTGTTC  774
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  770  ATGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACACCCCCCACCCCCACTCAAGTGCTGTTC  843

Query  775  CAGCCACCAGCCTACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCCAGACCCCCGTGCAGGACCT  848
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  844  CAGCCACCAGCCTACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCCAGACCCCCGTGCAGGACCT  917

Query  849  ATGCTTGGCCTATCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCC  922
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  918  ATGCTTGGCCTATCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCC  991

Query  923  TCCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCAT  996
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  992  TCCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCAT  1065

Query  997  ATGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCTACTTCAGTGGGAGCCACAT  1070
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1066  ATGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCTACTTCAGTGGGAGCCACAT  1139

Query 1071  GTTCCCCACCGGCTGCTTTGACAGA  1095
            |||||||||||||||||||||||||
Sbjct 1140  GTTCCCCACCGGCTGCTTTGACAGA  1164

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