Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12575
- Subject:
- NR_136757.2
- Aligned Length:
- 3813
- Identities:
- 840
- Gaps:
- 2972
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGATATCAATATGGCGGTTGTCAGCCAGACAAAGACAGTCAGTCTGATGTGATTGAGACAAGGGAGGTTTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGGGGGAGACTGGGAGATAGGGGCCTCCCCTCCCCCTTCTCCTCTTCCTGCGCCGGCCTCAACCCCTCCCCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCCCTCCCGACGGGCGCCCCACGCGGAAGACACCCCTCCCCCTCCCGCCTTCCCTCCTCCCTATCTCAGCCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCGTACTGGGACGTTGGGGAGGGGGCTGTGCCGGGCGGAGAGAACTCAGCGAGGATTCTGAGAATGGTAGATAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCAGATCATCTCTGGAAAGGATATTGATCCGCCTCATGTAAAGTATGCTTAGTTCCTTTCCAGTGGTTTTGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAAACCATGTCTCATTATACAGATGAACCCAGATTTACCATAGAGCAGATAGATCTGCTTCAGCGACTTCGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTACTGGAATGACTAAACATGAAATTCTCCATGCCTTGGAAACTTTGGACCGTCTTGATCAAGAGCATAGTGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGTTTGGAAGAAGGTCCAGCTATGGAGGAAGTTCATATGGGAATAGTACTAACAATGTCCCAGCATCTTCCTC 592
Query 1 -------------------------------------ATGTCCCCGTCACCTAGCAACAGTTATGATACTTCCC 37
|||||||||||||||||||||||||||||||||||||
Sbjct 593 TACAGCTACAGCTTCCACACAGACGCAGCATTCGGGAATGTCCCCGTCACCTAGCAACAGTTATGATACTTCCC 666
Query 38 CACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAGATGTCA 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAGATGTCA 740
Query 112 CCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATGT 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATGT 814
Query 186 AGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTCTTGCCA 259
|||||||||||||||||||||||||
Sbjct 815 AGATGATAAAGTGGAAGAATTAATG------------------------------------------------- 839
Query 260 ATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTTG 333
|||||||||||||||||||||||||||||||||||||
Sbjct 840 -------------------------------------AGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTTG 876
Query 334 CAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACCC 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 877 CAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACCC 950
Query 408 TGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCCTGAATGGAGACAAACGCCTCCCCCAG 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 951 TGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCCTGAATGGAGACAAACGCCTCCCCCAG 1024
Query 482 TCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTGGCTGTT 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1025 TCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTGGCTGTT 1098
Query 556 ATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTGCAATGC 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1099 ATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTGCAATGC 1172
Query 630 AGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATTGGTTTG 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1173 AGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATTGGTTTG 1246
Query 704 CTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGCAGCAATCCTGGAGAGTCATGGGATAGATGTGCAG 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1247 CTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGCAGCAATCCTGGAGAGTCATGGGATAGATGTGCAG 1320
Query 778 AGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGGATACTTGGCAAGTACG 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 AGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGGATACTTGGCAAGTACG 1394
Query 852 CAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAGAGAAGCAGAGAAGGTAGAAGAAGAGCGGAGGA 925
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 1395 CAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAGAGAAGCAGAGAAGGTAGAAGAAGAGAGGAGGA 1468
Query 926 TC------------------------------------------------------------------------ 927
||
Sbjct 1469 TCTGATCCAAACAAGATGACAGTACGAGCCATAGTGACCACCAAGACCCCATCTCATTAGCTGTGGAAATGGCA 1542
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1543 GCAGTCAACCACACTATCTTGGCATTGGCCCGACAAGGAGCCAACGAAATCAAGACAGAGGCCCTGGATGATGA 1616
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1617 CTGATCAGGGAGGTTAAACATGACAAGTTAACTTAGTTTAGACGTAGCACCTTAGCAGACTTTCCTCGGTCCTT 1690
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1691 AACATGTGTTCTTACAGTATAACTTGCAGTTTCTTGTATGTCAGGTAGCTGTTAGGGTCTTGTTCTGTGAAGAT 1764
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1765 GGCATGGTGCCCTCAGCCTTTGCATATACTCTCTCAGTATTAACTCCCAGTAAATAATAACCAACCAACCAACC 1838
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1839 AAACTTCCCTCTCCCAGCCCCCGAGGCTAGAAAATCTTGCTGCTCCGTCTTAGCATTCCAAGAAAGTGCTTCCA 1912
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1913 GGTATTTAGATAGCCCTCAGTTCTCAAATATTAGACTACGTGTAAAATCTTGGGTACCTTTAGATTCTTGTAAC 1986
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1987 ACTAGTCTGTACTCCCTTTTCCTTCCCCAAGACTGATAGGATGCAAGCTGAGGTCGTGGCACAGGAATGACAGA 2060
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2061 CACCATTTGGGGAGTATCCACAGAGTCAAAGGAACACTAGAATCCCCACCTCAGCGTGAGGATAATTGATTTCC 2134
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2135 AGCTGCAATAAGCCGTGCCTCATTATAGCCACACTGTGGCTAGATTATACTTCTTTGGGTGCTGTGCTAAGAAT 2208
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2209 GTCAATGGAAAAAGCCGATCTCAGATTTTGTTTGAAGTTAACATGCCTGACACAGACATCCTTTCCTCTCACAA 2282
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2283 GCTGTGTGACTTAGTAGATAAAATACTGCCTTCTGCCTTTGGGACCATGATTAAAAACAAAGACAAAAACCAAA 2356
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2357 AGTCATTAAAAAAAAAAAAAAAAAAAACCCAGCTTGAGAGCATTGGAAAAAAAAAATATGAGCTGAATGTCTAA 2430
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2431 TGGATGCTAAGTCCAGTTTTCAGAACCACTGTACATTCCACGGCACAGTTAGCAGTGCCTGCCTGGAAAAGTTT 2504
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2505 TGGAGGTCATCGTGGAAGTTGCTTTGCCTCCTGTCAGTGTCCCCTTTCCCTGCTACCAAAAAAGTCTTTCAAGG 2578
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2579 ATGGAGCTAAGGTCAAAAATGAGTGAAAAAACTTGCAGTGTTTGTATCCATTAAACGGAAGCCCCCTCACTCTG 2652
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2653 AGAGGTCACTAGAGGACTTCATAGTGGGGTTGTGCTGCTTATCACAGATGCAGACACTTGCCCAGATAGGAGCA 2726
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2727 GAGAAAAGCAGGGGACGTTTCCTACTCACATTGTGGCTGTATGAGAACACGATGGGACTGCTTTGCTGTTCTCT 2800
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2801 TTACTCTGTCCTTGGAGAGGTGTGAAAAGCTGTATTGCTACAGGCAATTTATTTAATAATTGGAAGCCATATTG 2874
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2875 ATAATGGATGTGGTAATATTTGTAAAGTTTAATCTACTTTAAGCGGCAGTAACTAATGGAATTTTTTTCCTTGA 2948
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2949 TCACATATGTAGCACTTTTGTTACTTTTTAAAGATATTTATATTTGATAAATCTTTTTTTCATTTTGAGAACTC 3022
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3023 AAAATACCAAACAGTGAACTTGCATTCTAAAGTCACCCTGTGATCACCTTGTCATCTAGTAGCAAAATGATGAA 3096
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3097 CTATTCATGCATCAAAGAAAATTACATCTGCTGGCCTTGTATGAAAATGATCTCTTGGCATCCCGATTAAATGA 3170
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3171 CACACTGTCACTGTGGGTAAGAGGAAAGAGCCTTCAATGTAGCAGCACAGGGTGCGCCTGAAAGAGGCACAACT 3244
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3245 GCTGTGGATTTTCTGCCTCGCTCCATCTCTCCTATGTATAATGAAGCCTTGTTTAAAGGGGCATGTGGGGCTGG 3318
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3319 ATGTTAAGCACGGCTTCTTTTTGTCCGTTACCTGAAAACAATTTCTAAGATAAAAGGAAGGTGCCATTTCCTTA 3392
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3393 CCTCTTCACCCATCCTCCTCCACCAAATGTATTCAACTTAAAACTGTGAGAGAGAGAGACTGAATGACCTTCCT 3466
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3467 CAGTTTTCCCTTTCTCATTCAGGAGATACTGAATATCCGCCAGTTTGTAGTTGGTTTCCTTCCACTTAAGGCAC 3540
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3541 ACGCTGACTGCATCATTTCCTTATCTGTTAATCCTGCTTATGTGAGTGTGAGGAAAGTCTTTGAGAGGGCATGA 3614
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3615 AAGTGCCACCTTATATATGTCTGTGACTTTAAAGAGCTATATGCAGGGCCTGGTCCCACTTTTGTCCATGGATT 3688
Query 928 --------------------------------------- 927
Sbjct 3689 TCAGGGGGAAAAAATATATGTACTTTTTTCAGCTTCCAA 3727
