Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12575
- Subject:
- NR_136758.2
- Aligned Length:
- 3894
- Identities:
- 909
- Gaps:
- 2971
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGATATCAATATGGCGGTTGTCAGCCAGACAAAGACAGTCAGTCTGATGTGATTGAGACAAGGGAGGTTTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGGGGGAGACTGGGAGATAGGGGCCTCCCCTCCCCCTTCTCCTCTTCCTGCGCCGGCCTCAACCCCTCCCCAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCCCTCCCGACGGGCGCCCCACGCGGAAGACACCCCTCCCCCTCCCGCCTTCCCTCCTCCCTATCTCAGCCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCGTACTGGGACGTTGGGGAGGGGGCTGTGCCGGGCGGAGAGAACTCAGCGAGGATTCTGAGAATGGTAGATAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCAGATCATCTCTGGAAAGGATATTGATCCGCCTCATGTAAAGTATGCTTAGTTCCTTTCCAGTGGTTTTGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAAACCATGTCTCATTATACAGATGAACCCAGATTTACCATAGAGCAGATAGATCTGCTTCAGCGACTTCGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTACTGGAATGACTAAACATGAAATTCTCCATGCCTTGGAAACTTTGGACCGTCTTGATCAAGAGCATAGTGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGTTTGGAAGAAGGTCCAGCTATGGAGGAAGTTCATATGGGAATAGTACTAACAATGTCCCAGCATCTTCCTC 592
Query 1 -------------------------------------ATGTCCCCGTCACCTAGCAACAGTTATGATACTTCCC 37
|||||||||||||||||||||||||||||||||||||
Sbjct 593 TACAGCTACAGCTTCCACACAGACGCAGCATTCGGGAATGTCCCCGTCACCTAGCAACAGTTATGATACTTCCC 666
Query 38 CACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAGATGTCA 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAGATGTCA 740
Query 112 CCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATGT 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATGT 814
Query 186 AGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTCTTGCCA 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTCTTGCCA 888
Query 260 ATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTTG 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTTG 962
Query 334 CAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACCC 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACCC 1036
Query 408 TGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCCTGAATGGAGACAAACGCCTCCCCCAG 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCCTGAATGGAGACAAACGCCTCCCCCAG 1110
Query 482 TCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTGGCTGTT 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTGGCTGTT 1184
Query 556 ATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTGCAATGC 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTGCAATGC 1258
Query 630 AGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATTGGTTTG 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATTGGTTTG 1332
Query 704 CTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGCAGCAATCCTGGAGAGTCATGGGATAGATGTGCAG 777
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1333 CTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATT---GCAATCCTGGAGAGTCATGGGATAGATGTGCAG 1403
Query 778 AGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAG----------------- 834
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1404 AGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGGGACTTACCCTTTCCAA 1477
Query 835 --------GATAC-----------------------------------------TTGGCAA------------- 846
||||| ||.|.||
Sbjct 1478 AGCTCTTTGATACGGAGTTCCCCTGAAGATGACAGGTGAGAAACATACCCCTTATTTGTAACACCATCTTCAGT 1551
Query 847 -------GTAC-----GCAAT---------------------------------------------GGGGAGG- 862
|||| ||||| |||||||
Sbjct 1552 GCCTGACGTACATCCTGCAATGCCAGCTTCCTTCACAGCTTTATTGTTTAACACATTGAGCTGCGCGGGGAGGA 1625
Query 863 ------------------AGGAGGAGGG--------------------AAGA----AGTTCA------GAGGGA 888
||||.||..| |||| |..||| |.||.|
Sbjct 1626 CAGCTTCACACTAGTTCTAGGATGACAGTACGAGCCATAGTGACCACCAAGACCCCATCTCATTAGCTGTGGAA 1699
Query 889 --GGCAG-AG--AAGCA--------------------GAGAAGGTAG-----------AAGA-AGAG----CGG 921
||||| || ||.|| ||.|||| || |||| |||| .||
Sbjct 1700 ATGGCAGCAGTCAACCACACTATCTTGGCATTGGCCCGACAAGG-AGCCAACGAAATCAAGACAGAGGCCCTGG 1772
Query 922 AGGATC-------------------------------------------------------------------- 927
|.|||.
Sbjct 1773 ATGATGACTGATCAGGGAGGTTAAACATGACAAGTTAACTTAGTTTAGACGTAGCACCTTAGCAGACTTTCCTC 1846
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1847 GGTCCTTAACATGTGTTCTTACAGTATAACTTGCAGTTTCTTGTATGTCAGGTAGCTGTTAGGGTCTTGTTCTG 1920
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1921 TGAAGATGGCATGGTGCCCTCAGCCTTTGCATATACTCTCTCAGTATTAACTCCCAGTAAATAATAACCAACCA 1994
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1995 ACCAACCAAACTTCCCTCTCCCAGCCCCCGAGGCTAGAAAATCTTGCTGCTCCGTCTTAGCATTCCAAGAAAGT 2068
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2069 GCTTCCAGGTATTTAGATAGCCCTCAGTTCTCAAATATTAGACTACGTGTAAAATCTTGGGTACCTTTAGATTC 2142
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2143 TTGTAACACTAGTCTGTACTCCCTTTTCCTTCCCCAAGACTGATAGGATGCAAGCTGAGGTCGTGGCACAGGAA 2216
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2217 TGACAGACACCATTTGGGGAGTATCCACAGAGTCAAAGGAACACTAGAATCCCCACCTCAGCGTGAGGATAATT 2290
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2291 GATTTCCAGCTGCAATAAGCCGTGCCTCATTATAGCCACACTGTGGCTAGATTATACTTCTTTGGGTGCTGTGC 2364
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2365 TAAGAATGTCAATGGAAAAAGCCGATCTCAGATTTTGTTTGAAGTTAACATGCCTGACACAGACATCCTTTCCT 2438
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2439 CTCACAAGCTGTGTGACTTAGTAGATAAAATACTGCCTTCTGCCTTTGGGACCATGATTAAAAACAAAGACAAA 2512
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2513 AACCAAAAGTCATTAAAAAAAAAAAAAAAAAAAACCCAGCTTGAGAGCATTGGAAAAAAAAAATATGAGCTGAA 2586
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2587 TGTCTAATGGATGCTAAGTCCAGTTTTCAGAACCACTGTACATTCCACGGCACAGTTAGCAGTGCCTGCCTGGA 2660
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2661 AAAGTTTTGGAGGTCATCGTGGAAGTTGCTTTGCCTCCTGTCAGTGTCCCCTTTCCCTGCTACCAAAAAAGTCT 2734
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2735 TTCAAGGATGGAGCTAAGGTCAAAAATGAGTGAAAAAACTTGCAGTGTTTGTATCCATTAAACGGAAGCCCCCT 2808
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2809 CACTCTGAGAGGTCACTAGAGGACTTCATAGTGGGGTTGTGCTGCTTATCACAGATGCAGACACTTGCCCAGAT 2882
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2883 AGGAGCAGAGAAAAGCAGGGGACGTTTCCTACTCACATTGTGGCTGTATGAGAACACGATGGGACTGCTTTGCT 2956
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2957 GTTCTCTTTACTCTGTCCTTGGAGAGGTGTGAAAAGCTGTATTGCTACAGGCAATTTATTTAATAATTGGAAGC 3030
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3031 CATATTGATAATGGATGTGGTAATATTTGTAAAGTTTAATCTACTTTAAGCGGCAGTAACTAATGGAATTTTTT 3104
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3105 TCCTTGATCACATATGTAGCACTTTTGTTACTTTTTAAAGATATTTATATTTGATAAATCTTTTTTTCATTTTG 3178
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3179 AGAACTCAAAATACCAAACAGTGAACTTGCATTCTAAAGTCACCCTGTGATCACCTTGTCATCTAGTAGCAAAA 3252
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3253 TGATGAACTATTCATGCATCAAAGAAAATTACATCTGCTGGCCTTGTATGAAAATGATCTCTTGGCATCCCGAT 3326
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3327 TAAATGACACACTGTCACTGTGGGTAAGAGGAAAGAGCCTTCAATGTAGCAGCACAGGGTGCGCCTGAAAGAGG 3400
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3401 CACAACTGCTGTGGATTTTCTGCCTCGCTCCATCTCTCCTATGTATAATGAAGCCTTGTTTAAAGGGGCATGTG 3474
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3475 GGGCTGGATGTTAAGCACGGCTTCTTTTTGTCCGTTACCTGAAAACAATTTCTAAGATAAAAGGAAGGTGCCAT 3548
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3549 TTCCTTACCTCTTCACCCATCCTCCTCCACCAAATGTATTCAACTTAAAACTGTGAGAGAGAGAGACTGAATGA 3622
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3623 CCTTCCTCAGTTTTCCCTTTCTCATTCAGGAGATACTGAATATCCGCCAGTTTGTAGTTGGTTTCCTTCCACTT 3696
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3697 AAGGCACACGCTGACTGCATCATTTCCTTATCTGTTAATCCTGCTTATGTGAGTGTGAGGAAAGTCTTTGAGAG 3770
Query 928 -------------------------------------------------------------------------- 927
Sbjct 3771 GGCATGAAAGTGCCACCTTATATATGTCTGTGACTTTAAAGAGCTATATGCAGGGCCTGGTCCCACTTTTGTCC 3844
Query 928 ---------------------------------------------- 927
Sbjct 3845 ATGGATTTCAGGGGGAAAAAATATATGTACTTTTTTCAGCTTCCAA 3890
