Nucleotide Global Alignment

Description

• Query: ccsbBroad304_12575
• Subject: XM_006518882.3
• Aligned Length: 1333
• Identities: 862
• Gaps: 407

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCTCAGCTCCTTTCCAGTGGTTTTGCTGGAAACCATGTCTCACTACACAGATGAACCCAGATTTACCATAGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACAGATAGACCTGCTCCAGCGTCTTCGGCGTACCGGGATGACCAAACATGAAATCCTTCATGCATTAGAAACTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGACCGTCTTGATCAAGAGCATAGTGATAAATTTGGAAGGAGGTCCAGCTACGGGGGAAGCTCATATGGGAAC  222

Query    1  ------------------------------------------------------------------ATGTCCCC  8
                                                                              ||||||||
Sbjct  223  AGTACCAACAACGTTCCAGCATCTTCCTCTACAGCCACAGCTTCCACGCAGACCCAGCACTCGGGAATGTCCCC  296

Query    9  GTCACCTAGCAACAGTTATGATACTTCCCCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGC  82
            .|||||.|||||||||||.|||||.|||||||.|||||||||||||||||||||||||||||||||.|||||.|
Sbjct  297  ATCACCCAGCAACAGTTACGATACCTCCCCACTGCCTTGCACTACCAATCAAAATGGGAGGGAGAACAATGATC  370

Query   83  GATTATCTACATCCAATGGAAAGATGTCACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGT  156
            ||||.||.|||||||||||.||||||||||||.|||||||||||||||||||||||||||||||||||||.||.
Sbjct  371  GATTGTCCACATCCAATGGGAAGATGTCACCATCTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATATAGC  444

Query  157  TTTGAAGCCTCAGAAGAGGACCTAGATGTAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGAT  230
            |||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct  445  TTTGAGGCCTCAGAAGAGGACCTAGATGTAGATGATAAAGTGGAGGAATTAATGAGGAGGGACAGCAGTGTGAT  518

Query  231  AAAAGAGGAAATCAAAGCCTTTCTTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCA  304
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  519  AAAAGAGGAAATCAAAGCCTTTCTTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGAATCA  592

Query  305  GTCAGAGCCGGATCTCTCATTGGCTGTTGCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTAC  378
            |||||||.||.||||||||.||||||.||||||||||||||||.||||||||.|||||||||||.||.||.|||
Sbjct  593  GTCAGAGTCGAATCTCTCACTGGCTGCTGCAGCAGGGATCAGATCTGAGTGAGCAGAAGAAAAGGGCGTTCTAC  666

Query  379  CGATGGTATCAACTTGAGAAGACAAACCCTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGA  452
            ||||||||||||||||||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||||
Sbjct  667  CGATGGTATCAACTTGAGAAGACAAACCCTGGGGCTACGCTAAGTATGAGACCTGCCCCCATTCCAATAGAGGA  740

Query  453  CCCTGAATGGAGACAAACGCCTCCCCCAGTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGAT  526
            ||||||||||||||||||.||||||||||||||.||||||.||||.||.|||||.||.||||||||||||.|||
Sbjct  741  CCCTGAATGGAGACAAACACCTCCCCCAGTCTCCGCCACACCTGGAACCTTCCGGCTTCGACGAGGGAGTAGAT  814

Query  527  TTACCTGGAGAAAGGAGTGCCTGGCTGTTATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAG  600
            ||||||||||||||||||||||.|||||.|||||||||||||||||||||||.||.||||||||||||||||||
Sbjct  815  TTACCTGGAGAAAGGAGTGCCTAGCTGTCATGGAAAGTTACTTCAATGAGAACCAGTACCCAGATGAAGCAAAG  888

Query  601  AGGGAAGAAATTGCAAACGCTTGCAATGCAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGT  674
            ||.|||||||||||.||.||||||||||||||.||||||||||||||||||||||||||.||.||||||.||||
Sbjct  889  AGAGAAGAAATTGCCAATGCTTGCAATGCAGTCATACAGAAGCCAGGCAAAAAGCTGTCTGACCTGGAACGAGT  962

Query  675  TACCTCCCTGAAAGTATATAATTGGTTTGCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATAT---TGCAG  745
            ||||||.||||||||||||||||||||||||||..||.||||||||||||||||.|||||||||||   .||||
Sbjct  963  TACCTCTCTGAAAGTATATAATTGGTTTGCTAATCGACGGAAGGAGATCAAGAGAAGAGCCAATATCGAAGCAG  1036

Query  746  CAATCCTGGAGAGTCATGGGATAGATGTGCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAAT  819
            ||||||||||||||||||||||||||||.|||||||||||||||||.||.||||||||.|||||.||||||||.
Sbjct 1037  CAATCCTGGAGAGTCATGGGATAGATGTACAGAGTCCAGGAGGCCATTCCAACAGTGACGATGTGGACGGGAAC  1110

Query  820  GACTACTCTGAGCAGGATACTTGGCAAGTACGCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAG  893
            ||||||||.||||||||.||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GACTACTCCGAGCAGGACACTTGGCAAGCACGCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAG  1184

Query  894  AGAAGCAGAGAAGG----------------TAG--------AAGA--------------------AGA--GCGG  921
            ||||||||||||||                |||        ||||                    |||  ||||
Sbjct 1185  AGAAGCAGAGAAGGATGACAGCACCAGCCATAGTGACCACCAAGATCCCATCTCGCTAGCTGTGGAGATGGCGG  1258

Query  922  AGGATC--------------------------------------------------------------------  927
            ..| ||                                                                    
Sbjct 1259  CCG-TCAACCACACTATCTTGGCATTGGCCCGGCAGGGAGCCAATGAAATCAAGACAGAGGCCCTGGATGATGA  1331

Query  928  -  927
             
Sbjct 1332  C  1332