Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12575
- Subject:
- XM_011245035.2
- Aligned Length:
- 1249
- Identities:
- 816
- Gaps:
- 362
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTCAGCTCCTTTCCAGTGGTTTTGCTGGAAACCATGTCTCACTACACAGATGAACCCAGATTTACCATAGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACAGATAGACCTGCTCCAGCGTCTTCGGCGTACCGGGATGACCAAACATGAAATCCTTCATGCATTAGAAACTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGACCGTCTTGATCAAGAGCATAGTGATAAATTTGGAAGGAGGTCCAGCTACGGGGGAAGCTCATATGGGAAC 222
Query 1 ------------------------------------------------------------------ATGTCCCC 8
||||||||
Sbjct 223 AGTACCAACAACGTTCCAGCATCTTCCTCTACAGCCACAGCTTCCACGCAGACCCAGCACTCGGGAATGTCCCC 296
Query 9 GTCACCTAGCAACAGTTATGATACTTCCCCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGC 82
.|||||.|||||||||||.|||||.|||||||.|||||||||||||||||||||||||||||||||.|||||.|
Sbjct 297 ATCACCCAGCAACAGTTACGATACCTCCCCACTGCCTTGCACTACCAATCAAAATGGGAGGGAGAACAATGATC 370
Query 83 GATTATCTACATCCAATGGAAAGATGTCACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGT 156
||||.||.|||||||||||.||||||||||||.|||||||||||||||||||||||||||||||||||||.||.
Sbjct 371 GATTGTCCACATCCAATGGGAAGATGTCACCATCTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATATAGC 444
Query 157 TTTGAAGCCTCAGAAGAGGACCTAGATGTAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGAT 230
|||||.||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 445 TTTGAGGCCTCAGAAGAGGACCTAGATGTAGATGATAAAGTGGAGGAATTAATGAGGAGGGACAGCAGTGTGAT 518
Query 231 AAAAGAGGAAATCAAAGCCTTTCTTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCA 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 519 AAAAGAGGAAATCAAAGCCTTTCTTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGAATCA 592
Query 305 GTCAGAGCCGGATCTCTCATTGGCTGTTGCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTAC 378
|||||||.||.||||||||.||||||.||||||||||||||||.||||||||.|||||||||||.||.||.|||
Sbjct 593 GTCAGAGTCGAATCTCTCACTGGCTGCTGCAGCAGGGATCAGATCTGAGTGAGCAGAAGAAAAGGGCGTTCTAC 666
Query 379 CGATGGTATCAACTTGAGAAGACAAACCCTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGA 452
||||||||||||||||||||||||||||||||.|||||.||||||||||||||.||||||||||||||||||||
Sbjct 667 CGATGGTATCAACTTGAGAAGACAAACCCTGGGGCTACGCTAAGTATGAGACCTGCCCCCATTCCAATAGAGGA 740
Query 453 CCCTGAATGGAGACAAACGCCTCCCCCAGTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGAT 526
||||||||||||||||||.||||||||||||||.||||||.||||.||.|||||.||.||||||||||||.|||
Sbjct 741 CCCTGAATGGAGACAAACACCTCCCCCAGTCTCCGCCACACCTGGAACCTTCCGGCTTCGACGAGGGAGTAGAT 814
Query 527 TTACCTGGAGAAAGGAGTGCCTGGCTGTTATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAG 600
||||||||||||||||||||||.|||||.|||||||||||||||||||||||.||.||||||||||||||||||
Sbjct 815 TTACCTGGAGAAAGGAGTGCCTAGCTGTCATGGAAAGTTACTTCAATGAGAACCAGTACCCAGATGAAGCAAAG 888
Query 601 AGGGAAGAAATTGCAAACGCTTGCAATGCAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGT 674
||.|||||||||||.||.||||||||||||||.||||||||||||||||||||||||||.||.||||||.||||
Sbjct 889 AGAGAAGAAATTGCCAATGCTTGCAATGCAGTCATACAGAAGCCAGGCAAAAAGCTGTCTGACCTGGAACGAGT 962
Query 675 TACCTCCCTGAAAGTATATAATTGGTTTGCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGCAGCAA 748
||||||.||||||||||||||||||||||||||..||.||||||||||||||||.|||||||||||.|||||||
Sbjct 963 TACCTCTCTGAAAGTATATAATTGGTTTGCTAATCGACGGAAGGAGATCAAGAGAAGAGCCAATATCGCAGCAA 1036
Query 749 TCCTGGAGAGTCATGGGATAGATGTGCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGAC 822
|||||||||||||||||||||||||.|||||||||||||||||.||.||||||||.|||||.||||||||.|||
Sbjct 1037 TCCTGGAGAGTCATGGGATAGATGTACAGAGTCCAGGAGGCCATTCCAACAGTGACGATGTGGACGGGAACGAC 1110
Query 823 TACTCTGAGCAG-GATACTTGGCAAGTACGCAATGGGGAGGAGGAG--------------GAG-GGAAGAA--G 878
|||||.|||||| .||.|||.|| ||||| ||| |..|||| |
Sbjct 1111 TACTCCGAGCAGTCATCCTTTGC------------------AGGAGCCTTGATTCAATTAGAGCGTCAGAAGGG 1166
Query 879 TTCAGAGGGAGGCAGAGAAGCAG-----AG----AAG-------GTAGAAGAAGAGCGGAGGATC 927
|.||..||||.|| .||||| || ||| .||
Sbjct 1167 TCCACCGGGATGC----CAGCAGCTACCAGTGCTAAGTGGCCTTTTA------------------ 1209