Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12575
- Subject:
- XR_001745590.2
- Aligned Length:
- 2586
- Identities:
- 926
- Gaps:
- 1659
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTAAGCGGCCGGATTGAGAGGAGGGAGGAAGCAGGGGGCTTCCGAGTGGGTGACCCAGACGCGGGCTGTGGGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGCAGTTCGTGGGGTCCGGTCCTGGAAAGGCGTCGACTGCCCCCCAACTCTTCTGGTTTCCTCTACGATGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGAAGGTTTGAATCCTGGAGGTGGGGTCTCCGGTGTGGAGTTCTGGAAACTGTGAGGTGATTTGCAGAATGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGATAACGCAGATCATCTCTGGAAAGGATATTGATCCGCCTCATGTAAAGTATGCTTAGTTCCTTTCCAGTGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTGCTGGAAACCATGTCTCATTATACAGATGAACCCAGATTTACCATAGAGCAGATAGATCTGCTTCAGCGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCGGCGTACTGGAATGACTAAACATGAAATTCTCCATGCCTTGGAAACTTTGGACCGTCTTGATCAAGAGCAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGTGACAAGTTTGGAAGAAGGTCCAGCTATGGAGGAAGTTCATATGGGAATAGTACTAACAATGTCCCAGCATC 518
Query 1 -------------------------------------------ATGTCCCCGTCACCTAGCAACAGTTATGATA 31
|||||||||||||||||||||||||||||||
Sbjct 519 TTCCTCTACAGCTACAGCTTCCACACAGACGCAGCATTCGGGAATGTCCCCGTCACCTAGCAACAGTTATGATA 592
Query 32 CTTCCCCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAG 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTTCCCCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAG 666
Query 106 ATGTCACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCT 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATGTCACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCT 740
Query 180 AGATGTAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTC 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGATGTAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTC 814
Query 254 TTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGG 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGG 888
Query 328 CTGTTGCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGAC 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTGTTGCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGAC 962
Query 402 AAACCCTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCCTGAATGGAGACAAACGCCTC 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAACCCTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCCTGAATGGAGACAAACGCCTC 1036
Query 476 CCCCAGTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTG 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCCCAGTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTG 1110
Query 550 GCTGTTATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTG 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GCTGTTATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTG 1184
Query 624 CAATGCAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATT 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CAATGCAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATT 1258
Query 698 GGTTTGCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATT---GCAGCAATCCTGGAGAGTCATGGGATA 768
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1259 GGTTTGCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGAAGCAGCAATCCTGGAGAGTCATGGGATA 1332
Query 769 GATGTGCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGGATACTTG 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GATGTGCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGGATACTTG 1406
Query 843 GCAAGTACGCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAGAGAAGCAGAGAAGGTAGAAGAAG 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GCAAGTACGCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAGAGAAGCAGAGAAGGTAGAAGAAG 1480
Query 917 AGCGGAGGATC--------------------------------------------------------------- 927
||.||||||||
Sbjct 1481 AGAGGAGGATCTGATCCAAACAAGCAAGTTACACCATTCACGACACACACTCAGTGTTTGAGAAATACTAGGGG 1554
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1555 CAGCTGGACCCCATGCCTAAACACGTACCGACGCAGGGCACGATGGAAGGCCCCACTCACTCTGGCCCCACTGC 1628
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1629 AGTGGGAACCCTCCTGCCCAAAGGAGTGGTTCTTCCAGAGTCTCTGGCACACTGACACATGCATCCTCTCATAA 1702
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1703 GTGCAATACCTGCATGACTCTTCACCTCGCCCTGATTTATTCTGCATTGCTTTTGGGGAAAATGTATTTAATTG 1776
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1777 TAGCCACTGCGTGGAGTAATTCAGTAACTAAGACTGTGGGAGTCCCTCCTCGACCCCCACATAGATGTTGACAG 1850
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1851 ATTTCATTAAAATTTTGATAGGATTTAAATTTCCATTTGGAATATGCAGAGAACGCATGGTACCTTCCCCTAGA 1924
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1925 CCACAGCAAGAAAACTTCTGCTCATTTTTCTGGGGTCTGTGCTTTTTTCTTGCTCCTCAGCCAGCTCATATAGT 1998
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1999 CCAATGTGTTCTTTAATAGCCTCTGTTTACCACACACCTAGAATGCATGCAAGTGTGTGCTGATCCCTTTGTAA 2072
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2073 ATTCTAAAAACTAATCTGTGAACATCAGAAGGAAACAATGATGTCCACACTTCTGAAGAACTACCATTTTTTCC 2146
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2147 CATTTAGGACTCTAGTTAATAGCCCCAAGAGAATATTCTGTAAGTCTTTCTGTTCGGAAACATTCCTCTTTTCA 2220
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2221 GTCTACCCACATAGATGGATCATTTCCATCTTTTTTTACAGATGCCCTAAGGGCAGCACATTCCATGTTTTGTT 2294
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2295 TGTTTTTTTCCTTAAGGGACTTACCCTTTCCAAAGCTCTTTGATACGGAGTTCCCCTGAAGATGACAGGTGAGA 2368
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2369 AACATACCCCTTATTTGTAACACCATCTTCAGTGCCTGACGTACATCCTGCAATGCCAGCTTCCTTCACAGCTT 2442
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2443 TATTGTTTAACACATTGAGCTGCGCGGGGAGGACAGCTTCACACTAGTTCTAGGATGACAGTACGAGCCATAGT 2516
Query 928 ---------------------------------------------------------------------- 927
Sbjct 2517 GACCACCAAGACCCCATCTCATTAGCTGTGGAAATGGCAGCAGTCAACCACACTATCTTGGCATTGGCCC 2586
