Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12575
Subject:
XR_001745591.1
Aligned Length:
2652
Identities:
926
Gaps:
1725

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGTTGATATCAATATGGCGGTTGTCAGCCAGACAAAGACAGTCAGTCTGATGTGATTGAGACAAGGGAGGTTTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCAGGGGGAGACTGGGAGATAGGGGCCTCCCCTCCCCCTTCTCCTCTTCCTGCGCCGGCCTCAACCCCTCCCCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTCCCCTCCCGACGGGCGCCCCACGCGGAAGACACCCCTCCCCCTCCCGCCTTCCCTCCTCCCTATCTCAGCCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTCGTACTGGGACGTTGGGGAGGGGGCTGTGCCGGGCGGAGAGAACTCAGCGAGGATTCTGAGAATGGTAGATA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACGCAGATCATCTCTGGAAAGGATATTGATCCGCCTCATGTAAAGTATGCTTAGTTCCTTTCCAGTGGTTTTGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGGAAACCATGTCTCATTATACAGATGAACCCAGATTTACCATAGAGCAGATAGATCTGCTTCAGCGACTTCGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CGTACTGGAATGACTAAACATGAAATTCTCCATGCCTTGGAAACTTTGGACCGTCTTGATCAAGAGCATAGTGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAAGTTTGGAAGAAGGTCCAGCTATGGAGGAAGTTCATATGGGAATAGTACTAACAATGTCCCAGCATCTTCCT  592

Query    1  --------------------------------------ATGTCCCCGTCACCTAGCAACAGTTATGATACTTCC  36
                                                  ||||||||||||||||||||||||||||||||||||
Sbjct  593  CTACAGCTACAGCTTCCACACAGACGCAGCATTCGGGAATGTCCCCGTCACCTAGCAACAGTTATGATACTTCC  666

Query   37  CCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAGATGTC  110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAGATGTC  740

Query  111  ACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATG  184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATG  814

Query  185  TAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTCTTGCC  258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTCTTGCC  888

Query  259  AATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTT  332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTT  962

Query  333  GCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACC  406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACC  1036

Query  407  CTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCCTGAATGGAGACAAACGCCTCCCCCA  480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCCTGAATGGAGACAAACGCCTCCCCCA  1110

Query  481  GTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTGGCTGT  554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTGGCTGT  1184

Query  555  TATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTGCAATG  628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTGCAATG  1258

Query  629  CAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATTGGTTT  702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATTGGTTT  1332

Query  703  GCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGCAGCAATCCTGGAGAGTCATGGGATAGATGTGCA  776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGCAGCAATCCTGGAGAGTCATGGGATAGATGTGCA  1406

Query  777  GAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGGATACTTGGCAAGTAC  850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGGATACTTGGCAAGTAC  1480

Query  851  GCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAGAGAAGCAGAGAAGGTAGAAGAAGAGCGGAGG  924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1481  GCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAGAGAAGCAGAGAAGGTAGAAGAAGAGAGGAGG  1554

Query  925  ATC-----------------------------------------------------------------------  927
            |||                                                                       
Sbjct 1555  ATCTGATCCAAACAAGCAAGTTACACCATTCACGACACACACTCAGTGTTTGAGAAATACTAGGGGCAGCTGGA  1628

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1629  CCCCATGCCTAAACACGTACCGACGCAGGGCACGATGGAAGGCCCCACTCACTCTGGCCCCACTGCAGTGGGAA  1702

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1703  CCCTCCTGCCCAAAGGAGTGGTTCTTCCAGAGTCTCTGGCACACTGACACATGCATCCTCTCATAAGTGCAATA  1776

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1777  CCTGCATGACTCTTCACCTCGCCCTGATTTATTCTGCATTGCTTTTGGGGAAAATGTATTTAATTGTAGCCACT  1850

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1851  GCGTGGAGTAATTCAGTAACTAAGACTGTGGGAGTCCCTCCTCGACCCCCACATAGATGTTGACAGATTTCATT  1924

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1925  AAAATTTTGATAGGATTTAAATTTCCATTTGGAATATGCAGAGAACGCATGGTACCTTCCCCTAGACCACAGCA  1998

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1999  AGAAAACTTCTGCTCATTTTTCTGGGGTCTGTGCTTTTTTCTTGCTCCTCAGCCAGCTCATATAGTCCAATGTG  2072

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2073  TTCTTTAATAGCCTCTGTTTACCACACACCTAGAATGCATGCAAGTGTGTGCTGATCCCTTTGTAAATTCTAAA  2146

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2147  AACTAATCTGTGAACATCAGAAGGAAACAATGATGTCCACACTTCTGAAGAACTACCATTTTTTCCCATTTAGG  2220

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2221  ACTCTAGTTAATAGCCCCAAGAGAATATTCTGTAAGTCTTTCTGTTCGGAAACATTCCTCTTTTCAGTCTACCC  2294

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2295  ACATAGATGGATCATTTCCATCTTTTTTTACAGATGCCCTAAGGGCAGCACATTCCATGTTTTGTTTGTTTTTT  2368

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2369  TCCTTAAGGGACTTACCCTTTCCAAAGCTCTTTGATACGGAGTTCCCCTGAAGATGACAGGTGAGAAACATACC  2442

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2443  CCTTATTTGTAACACCATCTTCAGTGCCTGACGTACATCCTGCAATGCCAGCTTCCTTCACAGCTTTATTGTTT  2516

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2517  AACACATTGAGCTGCGCGGGGAGGACAGCTTCACACTAGTTCTAGGATGACAGTACGAGCCATAGTGACCACCA  2590

Query  928  --------------------------------------------------------------  927
                                                                          
Sbjct 2591  AGACCCCATCTCATTAGCTGTGGAAATGGCAGCAGTCAACCACACTATCTTGGCATTGGCCC  2652

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