Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12575
- Subject:
- XR_001745592.2
- Aligned Length:
- 2583
- Identities:
- 926
- Gaps:
- 1656
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTAAGCGGCCGGATTGAGAGGAGGGAGGAAGCAGGGGGCTTCCGAGTGGGTGACCCAGACGCGGGCTGTGGGGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGGGCAGTTCGTGGGGTCCGGTCCTGGAAAGGCGTCGACTGCCCCCCAACTCTTCTGGTTTCCTCTACGATGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGAAGGTTTGAATCCTGGAGGTGGGGTCTCCGGTGTGGAGTTCTGGAAACTGTGAGGTGATTTGCAGAATGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGATAACGCAGATCATCTCTGGAAAGGATATTGATCCGCCTCATGTAAAGTATGCTTAGTTCCTTTCCAGTGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTGCTGGAAACCATGTCTCATTATACAGATGAACCCAGATTTACCATAGAGCAGATAGATCTGCTTCAGCGAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCGGCGTACTGGAATGACTAAACATGAAATTCTCCATGCCTTGGAAACTTTGGACCGTCTTGATCAAGAGCAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGTGACAAGTTTGGAAGAAGGTCCAGCTATGGAGGAAGTTCATATGGGAATAGTACTAACAATGTCCCAGCATC 518
Query 1 -------------------------------------------ATGTCCCCGTCACCTAGCAACAGTTATGATA 31
|||||||||||||||||||||||||||||||
Sbjct 519 TTCCTCTACAGCTACAGCTTCCACACAGACGCAGCATTCGGGAATGTCCCCGTCACCTAGCAACAGTTATGATA 592
Query 32 CTTCCCCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAG 105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CTTCCCCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAG 666
Query 106 ATGTCACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCT 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ATGTCACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCT 740
Query 180 AGATGTAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTC 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGATGTAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTC 814
Query 254 TTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGG 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGG 888
Query 328 CTGTTGCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGAC 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTGTTGCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGAC 962
Query 402 AAACCCTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCCTGAATGGAGACAAACGCCTC 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 AAACCCTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCCTGAATGGAGACAAACGCCTC 1036
Query 476 CCCCAGTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTG 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCCCAGTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTG 1110
Query 550 GCTGTTATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTG 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GCTGTTATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTG 1184
Query 624 CAATGCAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATT 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CAATGCAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATT 1258
Query 698 GGTTTGCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGCAGCAATCCTGGAGAGTCATGGGATAGAT 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GGTTTGCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGCAGCAATCCTGGAGAGTCATGGGATAGAT 1332
Query 772 GTGCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGGATACTTGGCA 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GTGCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGGATACTTGGCA 1406
Query 846 AGTACGCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAGAGAAGCAGAGAAGGTAGAAGAAGAGC 919
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 1407 AGTACGCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAGAGAAGCAGAGAAGGTAGAAGAAGAGA 1480
Query 920 GGAGGATC------------------------------------------------------------------ 927
||||||||
Sbjct 1481 GGAGGATCTGATCCAAACAAGCAAGTTACACCATTCACGACACACACTCAGTGTTTGAGAAATACTAGGGGCAG 1554
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1555 CTGGACCCCATGCCTAAACACGTACCGACGCAGGGCACGATGGAAGGCCCCACTCACTCTGGCCCCACTGCAGT 1628
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1629 GGGAACCCTCCTGCCCAAAGGAGTGGTTCTTCCAGAGTCTCTGGCACACTGACACATGCATCCTCTCATAAGTG 1702
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1703 CAATACCTGCATGACTCTTCACCTCGCCCTGATTTATTCTGCATTGCTTTTGGGGAAAATGTATTTAATTGTAG 1776
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1777 CCACTGCGTGGAGTAATTCAGTAACTAAGACTGTGGGAGTCCCTCCTCGACCCCCACATAGATGTTGACAGATT 1850
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1851 TCATTAAAATTTTGATAGGATTTAAATTTCCATTTGGAATATGCAGAGAACGCATGGTACCTTCCCCTAGACCA 1924
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1925 CAGCAAGAAAACTTCTGCTCATTTTTCTGGGGTCTGTGCTTTTTTCTTGCTCCTCAGCCAGCTCATATAGTCCA 1998
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1999 ATGTGTTCTTTAATAGCCTCTGTTTACCACACACCTAGAATGCATGCAAGTGTGTGCTGATCCCTTTGTAAATT 2072
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2073 CTAAAAACTAATCTGTGAACATCAGAAGGAAACAATGATGTCCACACTTCTGAAGAACTACCATTTTTTCCCAT 2146
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2147 TTAGGACTCTAGTTAATAGCCCCAAGAGAATATTCTGTAAGTCTTTCTGTTCGGAAACATTCCTCTTTTCAGTC 2220
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2221 TACCCACATAGATGGATCATTTCCATCTTTTTTTACAGATGCCCTAAGGGCAGCACATTCCATGTTTTGTTTGT 2294
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2295 TTTTTTCCTTAAGGGACTTACCCTTTCCAAAGCTCTTTGATACGGAGTTCCCCTGAAGATGACAGGTGAGAAAC 2368
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2369 ATACCCCTTATTTGTAACACCATCTTCAGTGCCTGACGTACATCCTGCAATGCCAGCTTCCTTCACAGCTTTAT 2442
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2443 TGTTTAACACATTGAGCTGCGCGGGGAGGACAGCTTCACACTAGTTCTAGGATGACAGTACGAGCCATAGTGAC 2516
Query 928 ------------------------------------------------------------------- 927
Sbjct 2517 CACCAAGACCCCATCTCATTAGCTGTGGAAATGGCAGCAGTCAACCACACTATCTTGGCATTGGCCC 2583
