Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12575
- Subject:
- XR_001745595.1
- Aligned Length:
- 1841
- Identities:
- 728
- Gaps:
- 1025
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGTTGATATCAATATGGCGGTTGTCAGCCAGACAAAGACAGTCAGTCTGATGTGATTGAGACAAGGGAGGTTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAGGGGGAGACTGGGAGATAGGGGCCTCCCCTCCCCCTTCTCCTCTTCCTGCGCCGGCCTCAACCCCTCCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCCCCTCCCGACGGGCGCCCCACGCGGAAGACACCCCTCCCCCTCCCGCCTTCCCTCCTCCCTATCTCAGCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCGTACTGGGACGTTGGGGAGGGGGCTGTGCCGGGCGGAGAGAACTCAGCGAGGATTCTGAGAATGGTAGATA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACGCAGATCATCTCTGGAAAGGATATTGATCCGCCTCATGTAAAGTATGCTTAGTTCCTTTCCAGTGGTTTTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAAACCATGTCTCATTATACAGATGAACCCAGATTTACCATAGAGCAGATAGATCTGCTTCAGCGACTTCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGTACTGGAATGACTAAACATGAAATTCTCCATGCCTTGGAAACTTTGGACCGTCTTGATCAAGAGCATAGTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAGTTTGGAAGAAGGTCCAGCTATGGAGGAAGTTCATATGGGAATAGTACTAACAATGTCCCAGCATCTTCCT 592
Query 1 --------------------------------------ATGTCCCCGTCACCTAGCAACAGTTATGATACTTCC 36
||||||||||||||||||||||||||||||||||||
Sbjct 593 CTACAGCTACAGCTTCCACACAGACGCAGCATTCGGGAATGTCCCCGTCACCTAGCAACAGTTATGATACTTCC 666
Query 37 CCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAGATGTC 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAGATGTC 740
Query 111 ACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATG 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATG 814
Query 185 TAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTCTTGCC 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTCTTGCC 888
Query 259 AATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTT 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTT 962
Query 333 GCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACC 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACC 1036
Query 407 CTGGCGCTACACTAAGTATGAGA---CCAGCCCCCATTCCAATAG------AGGACCC--TGAATGGAGACAAA 469
||| |.|| |||||.| |.|||| |||| ||.||.| ||||||
Sbjct 1037 CTG--GTTA-------TATGATATTTCTAGCC---------ATAGTTTGAAAGAACGCTATGAATG-------- 1084
Query 470 CGCCTCCCCCAGTCTCTGCCACATCTGGTACTTTC--CGACT-----GCGACGAGGGAGTC------GAT--TT 528
..||||..||| ||.|.|| |||| |.||| .|.||||.|.|| | ||| .|
Sbjct 1085 -------TTCAGTGGCTG----ATTTTGT--TTTCTTCAACTACATAACTACGATGCAG-CTGCCCTGATGACT 1144
Query 529 ACCTGGAGAA--AGGAGTGCCTGGCTGTTAT--GGAAAGTTACTTC--AATGAGAATC-----AATACCCAGAT 591
.||.||||.| ||.|| || |||||| | ||||| |||| ||.||..||||
Sbjct 1145 CCCAGGAGCAGCAGTAG------------ATTGGGAAAG------CAGAATGA-AATCTTAAGAAAACTAAGAT 1199
Query 592 GAAGCAA--------------AGAG--GGAAGAAAT-TGCAAACGCT-TGCAATG-------CAG------TTA 634
|| ||| |||| |||||||.| .||||...|| |.||| | ||| |||
Sbjct 1200 GA--CAAAAAAATTTATGTCTAGAGTTGGAAGAAGTAGGCAAGATCTATTCAA-GATACTAACAGGTGATTTTA 1270
Query 635 TACAGAAGCCAGGCAAAAAGCTG----------------TCAGATCT------------GGAAAG----AGTTA 676
||.|| ..|||.||| ||| |||| ||.||| |||.|
Sbjct 1271 TAAAG---------TGAAATCTGAAGTTATGGGACTATCTCA-ATCTATACTTTACACAGGCAAGTGACAGTGA 1334
Query 677 -CCTCCC------TGAAAGTATATAATTGGTTTGC------TAA-----CAG-----AAG------------GA 715
|||.|| ||.||.|.||..|||||.|||| ||| ||| ||| |
Sbjct 1335 GCCTGCCCTCATGTGTAAATTTAAGATTGGGTTGCGTTCTGTAATGCTGCAGCCTCAAAGCCTTTGCACACAG- 1407
Query 716 AGGAGATCAAGAGGAGAGCCAATATTGC--------AGCAAT---CCTG-------------GAGAGTCAT-GG 764
|..|.|.||..||..|| |||||||| ||||.| .||| ||..||||| |.
Sbjct 1408 ACTAAAACACTAGTTGA---AATATTGCATAATAATAGCATTGGCTCTGAGGTAGAAATAAAGAATGTCATAGA 1478
Query 765 GAT---------------AG-ATGTG-----------------------CAG---------------AGTCCAG 784
||| || ||||| ||| .||||||
Sbjct 1479 GATGTATTTTTGTGTGTAAGTATGTGATAAGATTTTTTTCCCTAAAGGTCAGTTTCTCAATCCGAATGGTCCAG 1552
Query 785 G-AGGCCACTCAAACAGTGATGA---TGTCGA---CGGGAATGA----------CTACTCTGA---GCAGGATA 838
| ||| .|.||||||..|.|| |.||.| |...|||.| |||.||||| .||| |.
Sbjct 1553 GCAGG---ATGAAACAGAAAAGAACCTATCAACCTCTACAATAATATTAAAAATCTATTCTGACTCCCAG--TT 1621
Query 839 CTTGGCAAGTACGCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAGAGA---------------- 896
.|| |.|..|.|||| .||||||.|.| ||||.|
Sbjct 1622 TTT----ATTTTGAAATG---------------------TTTCAGATGTA--CAGAAAATTCAAAAGACTAACA 1668
Query 897 -AGCAGAGA-----------------AGGTAGAAGAA----------------GAGCGGAGGATC 927
||.|||.| ||.||.||.|| |.|||.||.
Sbjct 1669 CAGTAGACACCTGTTTACTCTTTCTTAGATATAATAATTATTACCATTTGGCTGGGCGCAGT--- 1730
