Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12581
- Subject:
- XM_011534760.2
- Aligned Length:
- 2328
- Identities:
- 1301
- Gaps:
- 1023
Alignment
Query 1 ATGAATGAACACTTATCAAGCCTAATTAAAAAAAAACGTAAATGTATGCAGCCCAAGGATTTTAATTTTAAAAC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 ACCAGAAAATGATAAGAGATTTCAGAAGAAATTTGAGAAAATGGCTAAAGAGCTACAAAGGCAAAAAACAAATC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TAGATGATGATGTACCTATTCTCTTATTTGAATCTAATGGTTCATTAATATATACTCCCACAATTGAAATTAAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AGTAGTCACCACAGCGCAATGGAGAAGAGATTACAAGAGATGAAGGAGAAAAGGGAAAATCTTTCCCCCACCTC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ------------------ATGGAGAAGAGATTACAAGAGATGAAGGAGAAAAGGGAAAATCTTTCCCCCACCTC 56
Query 297 TTCCCAAATGATTCAGCAGTCTCATGATAATCCAAGTAACTCTCTGTGTGAAGCACCTTTGAACATTTCACGTG 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 57 TTCCCAAATGATTCAGCAGTCTCATGATAATCCAAGTAACTCTCTGTGTGAAGCACCTTTGAACATTTCACGTG 130
Query 371 ATACTTTGTGTTCAGATGAATACTTTGCTGGTGGCTTACACTCATCTTTTGATGATCTTTGTGGAAACTCAGGA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 131 ATACTTTGTGTTCAGATGAATACTTTGCTGGTGGCTTACACTCATCTTTTGATGATCTTTGTGGAAACTCAGGA 204
Query 445 TGTGGAAATCAGGAAAGGAAGTTGGAAGGATCCATTAATGACATTAAAAGTGATGTGTGTATTTCTTCACTTGT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 205 TGTGGAAATCAGGAAAGGAAGTTGGAAGGATCCATTAATGACATTAAAAGTGATGTGTGTATTTCTTCACTTGT 278
Query 519 ATTGAAAGCAAATAATATTCATTCATCACCATCTTTCACTCACCTCGATAAATCAAGTCCTCAGAAATTTCTGA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 279 ATTGAAAGCAAATAATATTCATTCATCACCATCTTTCACTCACCTCGATAAATCAAGTCCTCAGAAATTTCTGA 352
Query 593 GTAATCTTTCAAAGGAAGAAATAAACTTGCAAAGAAATATTGCAGGTAAAGTAGTCACCCCTCACCAAAAGCAG 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 353 GTAATCTTTCAAAGGAAGAAATAAACTTGCAAAGAAATATTGCAGGTAAAGTAGTCACCCCTGACCAAAAGCAG 426
Query 667 GCTGCAGGTATGTCTCAGGAGACGTTTGAAGAGAAGTATCGTTTGTCTCCTACCTTATCTTCAACAAAAGGCCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 427 GCTGCAGGTATGTCTCAGGAGACGTTTGAAGAGAAGTATCGTTTGTCTCCTACCTTATCTTCAACAAAAGGCCA 500
Query 741 CCTTTTGATACATTCAAGACCCAGGAGTTCCTCAGTAAAGAGAAAAAGAGTATCACATGGCTCCCATTCACCTC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 501 CCTTTTGATACATTCAAGACCCAGGAGTTCCTCAGTAAAGAGAAAAAGAGTATCACATGGCTCCCATTCACCTC 574
Query 815 CGAAGGAAAAATGCAAGAGAAAGAGGAGCACCAGGAGATCTATCATGCCGAGGCTGCAGCTGTGCAGGTCGGAA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 575 CGAAGGAAAAATGCAAGAGAAAGAGGAGCACCAGGAGATCTATCATGCCGAGGCTGCAGCTGTGCAGGTCGGAA 648
Query 889 GGCAGGCTGCAGCACGTGGCGGGACCTGCCCTGGAGGCTCTTAGCTGTGGGGAGTCTTCATATGATGACTATTT 962
|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 649 GACAGGCTGCAGCACGTGGCGGGACCTGCCCTGGAGGCTCTTAGCTGTGGGGAGTCTTCATATGATGACTATTT 722
Query 963 TTCACCTGATAATCTTAAGGAAAGGTATTCAGAGAATCTTCCTCCTGAATCTCAGCTGCCATCAAGCCCTGCTC 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 723 TTCACCTGATAATCTTAAGGAAAGGTATTCAGAGAATCTTCCTCCTGAATCTCAGCTGCCATCAAGCCCTGCTC 796
Query 1037 AGTTGAGCTGCAGAAGTCTTTCTAAGAAGGAGAGAACAAGCATATTTGAAATGTCTGATTTTTCCTGCGTTGGC 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 797 AGTTGAGCTGCAGAAGTCTTTCTAAGAAGGAGAGAACAAGCATATTTGAAATGTCTGATTTTTCCTGCGTTGGC 870
Query 1111 AAAAAAACCAGAACAGTTGACATTACCAATTTCACAGCAAAAACCATCTCCAGTCCTCGGAAAACTGGAAATGG 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 871 AAAAAAACCAGAACAGTTGACATTACCAATTTCACAGCAAAAACCATCTCCAGTCCTCGGAAAACTGGAAATGG 944
Query 1185 TGAAGGCCGTGCAACTTCGAGTTGCGTGACTTCTGCCCCTGAAGAAGCCCTAAGGTGTTGTAGACAGGCTGGGA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 945 TGAAGGCCGTGCAACTTCGAGTTGCGTGACTTCTGCCCCTGAAGAAGCCCTAAGGTGTTGTAGACAGGCTGGGA 1018
Query 1259 AAGAAGACGCATGCCCAGAGGGAAATGGCTTTTCTTACACCATTGAGGACCCTGCTCTTCCAAAAGGACATGAT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1019 AAGAAGACGCATGCCCAGAGGGAAATGGCTTTTCTTACACCATTGAGGACCCTGCTCTTCCAAAAGGACATGAT 1092
Query 1333 GATGATTTAACTCCTTTGGAAGGAAGCCTTGAAGAAATGAAAGAAGCGGTTGGTCTGAAAAGCACACAGAACAA 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1093 GATGATTTAACTCCTTTGGAAGGAAGCCTTGAAGAAATGAAAGAAGCGGTTGGTCTGAAAAGCACACAGAACAA 1166
Query 1407 AGGTACCACTTCCAAAATATCAAACTCCTCTGAAGGCGAAGCCCAGAGTGAACATGAGCCATGTTTTATAGTTG 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1167 AGGTACCACTTCCAAAATATCAAACTCCTCTGAAGGCGAAGCCCAGAGTGAACATGAGCCATGTTTTATAGTTG 1240
Query 1481 ACTGTAACATGGAGACGTCTACAGAAGAGAAGGAAAACTTACCCGGAGGATACAGTGGAAGTATG--------- 1545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|.
Sbjct 1241 ACTGTAACATGGAGACGTCTACAGAAGAGAAGGAAAACTTACCCGGAGGATACAGTGGAAGTGTTAAAAATAGA 1314
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 1315 CCAACAAGGCATGATGTTTTAGATGACTCATGTGACGGCTTTAAGGACCTCATCAAACCTCATGAGGAATTGAA 1388
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 1389 GAAAAGTGGGAGAGGCAAAAAGCCAACAAGAACATTAGTCATGACAAGCATGCCATCTGAAAAGCAGAATGTCG 1462
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 1463 TCATCCAGGTTGTGGATAAATTGAAAGGCTTTTCAATTGCACCAGACGTCTGTGAGACCACGACTCACGTGCTT 1536
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 1537 TCCGGGAAGCCACTTCGCACCCTGAATGTGCTGCTGGGAATTGCGCGTGGCTGCTGGGTTCTCTCTTATGATTG 1610
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 1611 GGTGCTATGGTCTTTAGAATTGGGTCACTGGATTTCTGAGGAGCCGTTCGAACTGTCTCACCACTTCCCTGCAG 1684
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 1685 CTCCCCTGTGCCGAAGCGAGTGCCACTTGTCTGCAGGGCCGTACCGCGGAACCCTCTTTGCCGACCAGCCAGCG 1758
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 1759 ATGTTTGTCTCGCCTGCCAGCAGCCCCCCAGTGGCCAAGCTCTGTGAACTAGTCCACCTGTGCGGAGGCCGGGT 1832
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 1833 CAGCCAAGTCCCCCGCCAGGCCAGCATCGTCATCGGGCCCTACAGCGGAAAGAAGAAAGCCACAGTCAAGTATC 1906
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 1907 TGTCTGAGAAATGGGTCTTAGTATTCTGTGGCCAGAGGAGGGAAAGGAAGGTGGGTACTGAAACGACAGCTCTT 1980
Query 1546 -------------------------------------------------------------------------- 1545
Sbjct 1981 CCCCTGGGACTGCAGCATCCGAGCACCACAGTCCACCCGCCAGCCTTTGTTCCTGCACAGTCTGCCTCTCAAGA 2054
Query 1546 ---------------------------------- 1545
Sbjct 2055 CCAACAACTCCATATCTATGACGATAAAAATTGT 2088
