Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12597
- Subject:
- NR_033265.2
- Aligned Length:
- 4454
- Identities:
- 149
- Gaps:
- 4289
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACTCGCGTCCCTGCGCCGTGCCTGCCTCGCGCTCCCTGTTACGGCGTTCGTCCCCGGGCCTGGCGCCCGCGTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCCGGCTCCGCGGCGGCCTGGTCCGATGGCTCCTCAGCGGAGGGCCGCAACCAAGGCGCCCGAGGGCAACGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCGGCCGAGCGCCGGAACCGGAGCAGCACCAAGAAGGACCGAGCCCCGCGGGAGGTGCAGAGGCTGTGGCAGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCCGTGGCTAAGGACCGCGGGCCTGGGGGCTGGCTTTGTGCTCACCGCACTCCTGCTCTGGAGCAGCTTGGGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCGACGACGGGGTCGCAGAGGTCCTGGCCCGCCGTGGCGAGGTCGTGGCAGGGAGATTCATCGAGGTGCCCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCTGAGGACTACGACAGTCACCGCAGGCTGCACTCCCCGAAAGTGCGGCAGAGGTGTCACCGATGTCGTCATC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCAGGGAGGAAGCGGAGCGGATTCGCAGCGTAGCTGAAAAGGGGCTCTCCCTGGGAGGATCTGACGGAGGGGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATCCATTCTGGACTTGCACTCAGGGGCCCTGTCTGTCGGGAAGCACTTTGTGAACCTGTACAGATACTTCGGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATAAAATACAGAACATCTTCTCAGAGGAGGACTTCCGGTTATACCGGGAGGTGCGGCAGAAGGTCCAGCTCACC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATTGCTGAGGCTTTTGGCATCAGCGCATCCTCGCTGCATCTGACCAAGCCCACCTTCTTCTCCCGCATAAACAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CACGGAAGCGCGGACGGCGCACGACGAGTACTGGCATGCGCACGTGGACAAGGTGACCTACGGCTCCTTCGACT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACACCTCGCTGCTGTACCTCTCCAACTACCTGGAGGACTTCGGCGGAGGGCGGTTCATGTTCATGGAGGAGGGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCCAACAAGACGGTGGAGCCGAGAGCTGGATGTTTTTGTTTCCGGATGATGTCTTGTGGGTTCCAAGAAGTTAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGACCGAGAGCCAGTGAAGCTGCTGGTGCGAAGGCTGGAGTCAGGTGTCCTCCGGGGACTCACCACCCGCCCG 1036
Query 1 ---------------------------------------------------------ATGGCCACCTCTCTCTC 17
.|||...||...||...
Sbjct 1037 AGAGGGGAGAGACACATGCGATTCTGGAAGCTGAGAGCATTGCTTATTGTTGATTCCTTGGTTGCCGTGCTGAG 1110
Query 18 TTCTCCTCT-----CCCAGGTCGCGTCTCCTTCTTCACCTCGGGGTCCGAGAACCTACACCGCGTGGAGAAGGT 86
|.||.||.| ..||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCCTGCTTTAAGGAAGCAGGTCGCGTCTCCTTCTTCACCTCGGGGTCCGAGAACCTACACCGCGTGGAGAAGGT 1184
Query 87 CCACTGGGGCACCCGTTACGCCATTACCATCGCCTTCAGCTGCAACCCCGACCATGGCATCGAGGACCCAGCGT 160
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCACTGGGGCACCCGTTACGCCATCACCATCGCCTTCAGCTGCAACCCCGACCATGGCATCGAGGACCCAGCGT 1258
Query 161 TCCCG--------------------------------------------------------------------- 165
|||||
Sbjct 1259 TCCCGTAGCCAGCAGCCGGGCCAAGGTAACTTCAGGAGGGCCCGTGTGGAGGCAGCCGCGCCAGTCGTGCACCC 1332
Query 166 -------------------------------------------------------------------------- 165
Sbjct 1333 ACCCCCACGTCCACCCGCTCCTGTTGCACAGAGTGCCTTAGGAATTCTCTGATTTTGATTTGCTGACGTGTTAA 1406
Query 166 -------------------------------------------------------------------------- 165
Sbjct 1407 TCTTTTCATCTGTGAGTAAATGAAGGGAACCAGCTTTTCACTTCTCCAGCATCATGTGTGCTTGGGCTGTAGGC 1480
Query 166 -------------------------------------------------------------------------- 165
Sbjct 1481 CTGGGAGCCTGAGGTGGAGGCCAGGAAAGGGACCCAGCAGGACGGGGCACAAGTCCCCATCTGTGAATGGACGG 1554
Query 166 -------------------------------------------------------------------------- 165
Sbjct 1555 GACTCATCCACCCAGGTTCAGCAACCCCCCGGGACTCGTCCAGGTTCAGCAACCCCCCGGCCCATCAAAGACTG 1628
Query 166 -------------------------------------------------------------------------- 165
Sbjct 1629 GCTAAAGCATCAGCCATAAATGGGGACAAACGTGGGGCCAGCAGCTTCTGTTCGGGGTCTCGGCATCAGCAAAC 1702
Query 166 -------------------------------------------------------------------------- 165
Sbjct 1703 CGCAGCAGCTTTGGAGAAGGGTCCGTGAGTGGCGGCTCTGGAGGCAGCAACGGGGTCCTTTGGGGTGGGTGGGA 1776
Query 166 -------------------------------------------------------------------------- 165
Sbjct 1777 GTTCTGCTGGATTCAGGTGGAGGTGAACATCTGCCGTTCCCACAGCCCTGCGTGCACCCCCAATGCTGCTGGCC 1850
Query 166 -------------------------------------------------------------------------- 165
Sbjct 1851 CACAAATCACCGTGGGCCACGGCCCCACCACACCAGGCTTGGCCCTGTCAGCGGCCAGCATCCCAAGGGCCAGG 1924
Query 166 -------------------------------------------------------------------------- 165
Sbjct 1925 GTCCGAGTGTCCTCACCAAGGAGGCTCTTGGCGTCGCTGTGCCGGCTCCCATGGGCCTTCTGCTGGGTCGAGGG 1998
Query 166 -------------------------------------------------------------------------- 165
Sbjct 1999 TAGGTCTCCTCCTCCCCCTTTGCCCTGGCATTAAACTGATGGTCAGGCTGGGCGCGGTGGCTCACACCTGTAAT 2072
Query 166 -------------------------------------------------------------------------- 165
Sbjct 2073 CTCAGCACTGCGGGAGGCCGAGGCAGGAGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGC 2146
Query 166 -------------------------------------------------------------------------- 165
Sbjct 2147 GAAACCCTGTCTCTACTAAAAACACAAAAACAAATTAATCCCAGCTACTGGGGAGGCTGAGGCAGGAGAATCGC 2220
Query 166 -------------------------------------------------------------------------- 165
Sbjct 2221 TTGAACCCAGGGGGCAGAAGTTGCAGTGAGCCGAGATCGTGCCACTACACTCCAGCCTGGGTGACAGAGTGAGA 2294
Query 166 -------------------------------------------------------------------------- 165
Sbjct 2295 CTCCATCTTAAAAATATAAAAATAAAGTGGTGGTCAGAGGAGCCCCGAATAGACCAGTTGTGGAGAGGCCTGGG 2368
Query 166 -------------------------------------------------------------------------- 165
Sbjct 2369 TGGGGTGGCTGGCAGGGAGGGCAGGCCAAGCCCAGTTTCTGCCCACAGTCACCTCGAGGTGACTGTCCAGGGCT 2442
Query 166 -------------------------------------------------------------------------- 165
Sbjct 2443 TTGGGCACCTTCCCGGGAGGGGGACGGCCGCCCACCCTGAGTGGTGTTGGAAGCTGGGCTCTCCTGGATGCCCT 2516
Query 166 -------------------------------------------------------------------------- 165
Sbjct 2517 GACCCAGCTGCCTGGGGAGAGCCCTGGGCCCCTCCTCCCTCAGCACCTCCTCCCTCAGCCCCTCCTGCCTCGGT 2590
Query 166 -------------------------------------------------------------------------- 165
Sbjct 2591 CCCTCCTCCCTTAGCCTGTCTGGCATAGATCCATGTTCCCTAGCCCCTGGCACAGGTGCCTCTGACTGGAGGAG 2664
Query 166 -------------------------------------------------------------------------- 165
Sbjct 2665 GCCCCACCTGTGGCCCGGGAGCTGCTCTGGGGGTTGATAAAGGGCAGCATTATTGGGTCCTGGGAAGGAGCGGG 2738
Query 166 -------------------------------------------------------------------------- 165
Sbjct 2739 CGTGAGGCCAGCTGAGGCATGGTGACCCCTGGGAAGGAGCGGGCGTGAGGCCAGCTGAGGCATGGTGACCCCTG 2812
Query 166 -------------------------------------------------------------------------- 165
Sbjct 2813 GGAAGGAGCGGGCGTGAGGCCAGCTGAGGCATGGTGACCCCTGGGAAGGAGCGGGCGTGAGGCCAGCTGAGGCA 2886
Query 166 -------------------------------------------------------------------------- 165
Sbjct 2887 TGGTGACCCCTGGGAAGGAGCGGGCGTGAGGCCAGCTGAGGCATGGTGACCCCTGGGTACGGGGGACTTGGGGG 2960
Query 166 -------------------------------------------------------------------------- 165
Sbjct 2961 CCGCACCTTGGTTTGCCCAGGGCCCCTCCTGCACCACGGGCCACATGCGGAGGACGGCGTGGGATAGGCTCCCT 3034
Query 166 -------------------------------------------------------------------------- 165
Sbjct 3035 GGGTCCACAGCTTCTGCCCGTGTATGGGGAACCCTCCTTGGTCAGGGCTGCAGGCTCTGGGCAGATGGGGCAGG 3108
Query 166 -------------------------------------------------------------------------- 165
Sbjct 3109 AACCCTGAGGCTCCCGCGCCCTCCCATGGCCTCTGATGTGGGACACTGGAGCGAGGCACGATTCTGAAGGACTC 3182
Query 166 -------------------------------------------------------------------------- 165
Sbjct 3183 CATGGATCTGGGAGGATGAGGCCCACCTCCGGTTGGTGGCCAAAGCCGTCCTTGCGGGGCCGGCTGCTTCACGG 3256
Query 166 -------------------------------------------------------------------------- 165
Sbjct 3257 ACACTCTCCGGGTCGGGCTGGTGGGCCCCATCGTGGGTGGGAAGTCGCCTGAGCCTGGGCCGCCCTTGAGCTTC 3330
Query 166 -------------------------------------------------------------------------- 165
Sbjct 3331 TCCCAGTCTTGACTTTCCAGAGGGTCCGTGGCTGTGGTCATGGTCGGGGCAGGTGGAAAATGCTGCATGGAAAC 3404
Query 166 -------------------------------------------------------------------------- 165
Sbjct 3405 CTGATCCTGTCACCTTGGAGTAAATGATGATGTCGCCGGCTTCTCGCCACGTCTAAAGGATAAATGCATTTGAA 3478
Query 166 -------------------------------------------------------------------------- 165
Sbjct 3479 GAAAGTGGGTGTTGGGTTTGTTATGGGTTAAAGTGCTTTTGAAATAAGTAAATTATTAGTTTGATTTTCATTCT 3552
Query 166 -------------------------------------------------------------------------- 165
Sbjct 3553 TGGCTACTTACACTATTCATGATAATCACAGAGATACTTGGACAAAGAAATATATTTGGGCAAAAGCAAGAATT 3626
Query 166 -------------------------------------------------------------------------- 165
Sbjct 3627 TCCTTCTTTTTTTTTTTGAGACGGAGTCTAACTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCAATCTCGGCTCA 3700
Query 166 -------------------------------------------------------------------------- 165
Sbjct 3701 CTGCAAGGTCCACCTCCTGGGTTCCCACCATTCTCCTGCCTCAACCTCCCGAGTAGCTGGGACTACAGGCGCCC 3774
Query 166 -------------------------------------------------------------------------- 165
Sbjct 3775 GCCACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGATTTCACCGTGTTAGCCAGAATGAAGAA 3848
Query 166 -------------------------------------------------------------------------- 165
Sbjct 3849 TTTCCTTCTGAAGTGGGAACATATGGCTCATGCTGGTAATCCCAGCACTTTGGGAGGCCAAGGTAGGAAGATCA 3922
Query 166 -------------------------------------------------------------------------- 165
Sbjct 3923 CTTGAGCCCAGGAGTTGGAGACCCATCTGTGCAACATAGTGAGACGCTGTCTGTACAAGAAACTTTTAAAAAAT 3996
Query 166 -------------------------------------------------------------------------- 165
Sbjct 3997 GTAGCTGGGCGTGGCAGTGTGCTCCTGTGGTCCCAGCTACTCGGAGCTGAGGCAGGACGACTGCTTGAGCCCAG 4070
Query 166 -------------------------------------------------------------------------- 165
Sbjct 4071 GAGGTCGAGGCTACAGTGAGCTGTGACGGCTCCACTGCATTCCAGCCTGGGAGACAGCAAGATACTGTCTCAAA 4144
Query 166 -------------------------------------------------------------------------- 165
Sbjct 4145 AAAAAATTTATCATTGAAGCCTGGGCATTTTAAAAAAATAAAAAGGTGGGAAAATACGTGGGCACAGCAGTGAA 4218
Query 166 -------------------------------------------------------------------------- 165
Sbjct 4219 TCCTCACACCCTGGGCTTTGCCCAAGAAGTGCTCGTGAACCTGATGAAAGTGTCGGGTGTGGCCGACGTGAGGC 4292
Query 166 -------------------------------------------------------------------------- 165
Sbjct 4293 TGTTCCAGGAGCCACGAGGGGTGATTGGTTCCGCTAGAAGGTTCCAGGGAGGAACTGGAGTCTCAGGTGTGTCC 4366
Query 166 -------------------------------------------------------------------------- 165
Sbjct 4367 TCTGATGAGTGATCTATTTTTAAGTAAAAGTGTTTCATTAAAGTCAAAGATGATTATTCCTTTCAAAATAAAGA 4440
Query 166 -------------- 165
Sbjct 4441 ATCTAGGAGGGCGA 4454
