Nucleotide Global Alignment

Description

• Query: ccsbBroad304_12606
• Subject: NM_001289671.1
• Aligned Length: 926
• Identities: 621
• Gaps: 232

Alignment

Query   1  ---------------------ATGAGGATGGAGGCCGGGGAGGCAGCGCCGCCGGCGGGGGCGGGCGGCCGCGC  53
                                |||||||||||||||||||||||||||||.||||.||||||||||||||||.|
Sbjct   1  ATGCAGACAACGCGGCCGGCGATGAGGATGGAGGCCGGGGAGGCAGCGCCACCGGTGGGGGCGGGCGGCCGCCC  74

Query  54  CGCAGGCGGCTGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGT  127
           ||..||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||
Sbjct  75  CGGGGGCGGCTGGGGCAAGTGGGTGCGGCTGAACGTGGGGGGCACGGTGTTCCTGACCACCCGCCAGACGCTGT  148

Query 128  GCCGCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGAGACCGGG  201
           |.||.|||||||||||||||||||||||||||||.|||||.||||||||.||.||||||.||||||||||||||
Sbjct 149  GTCGGGAGCAGAAGTCCTTCCTCAGCCGCCTGTGTCAGGGCGAAGAGCTTCAATCGGACAGGGATGAGACCGGG  222

Query 202  GCCTACCTCATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCT  275
           |||||||||||||||||||||||||||||||||||||||||||||||.||||||.|||||||.||..|||||||
Sbjct 223  GCCTACCTCATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAATTTCCTCAGGCATGGAAAATTGGTGCT  296

Query 276  GGACAAGGACATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACATCGGCCCGCTGATCCGCATCA  349
           |||||||||||||||.|||||||||||||||||||||||.||||||||||||||.||.||.|||||.||.||||
Sbjct 297  GGACAAGGACATGGCCGAGGAGGGGGTCCTGGAGGAAGCAGAGTTCTACAACATTGGTCCTCTGATTCGAATCA  370

Query 350  TCAAAGACCGGATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGCATGTGTACCGCGTGCTGCAG  423
           ||||||||.|||||||.|||||.||||||||.||..|||||||.|||||.||||||||.|||||.|||||||||
Sbjct 371  TCAAAGACAGGATGGAGGAGAAAGACTACACAGTGGCCCAGGTGCCACCTAAGCATGTATACCGAGTGCTGCAG  444

Query 424  TGCCAGGAGGAGGAGCTCACGCAAATGGTCTCCACCATGTCTGATGGCTGGCGCTTCGAGCAGCTGGTGAACAT  497
           |||||.||||||||||||||.||.|||||.|||||.|||||.||.|||||||||||||||||||||||||||||
Sbjct 445  TGCCAAGAGGAGGAGCTCACACAGATGGTATCCACTATGTCCGACGGCTGGCGCTTCGAGCAGCTGGTGAACAT  518

Query 498  CGGCTCCTCCTACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAGGAGCTCCACAGCA  571
           ||||||||||||||||||.||.||.|||||||||||.||||||||||||||||||||.|||||||||||||||.
Sbjct 519  CGGCTCCTCCTACAACTATGGGAGTGAGGACCAGGCCGAGTTCCTGTGTGTGGTGTCTAAGGAGCTCCACAGCT  592

Query 572  CCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCAGCTGGAGGAGCAGCAG---  642
           |||||.||||.||||||||.|||||||..|||||..|||  |||.|.|    .||.|| .||||.|  |.|   
Sbjct 593  CCCCACACGGCCTGAGCTCCGAGTCCACTCGCAAGGCCA--AGCCCTG----TCATCT-CAGGATC--CCGCTA  657

Query 643  ---------------CAGCAGGAGGAGGAGGTGGAGGAGGTGGAGGTGGAACAG----------------GTGC  685
                          ||.|                               ||.|                .|.|
Sbjct 658  ACCTTTTCTCCCTCCCACC-------------------------------ACCGCCTCCTCCTCCTCCGCTTCC  700

Query 686  AGGTGGAGGCAGATGCACAGGAGAAAGGTTCCC-GTCCGCACCCTCTCAGACCTGAGGCTGAGCTTGCAGTGAG  758
           .|.||||||                    |||| ||||||||||||.||||||..||.||||||||||||    
Sbjct 701  TGCTGGAGG--------------------TCCCTGTCCGCACCCTCCCAGACCCAAGCCTGAGCTTGCAG----  750

Query 759  GGCTTCTCCTCGGCCCCTCGCCCGCCCCCAGAGCTGCCATCCCTGCTGTTACAAGCCAGAGGCACCCGGATGTG  832
                                                                                     
Sbjct 751  --------------------------------------------------------------------------  750

Query 833  AGGCCCCAGATCACCTCCAGGGACTTGGGGTTCCCATC  870
                                                 
Sbjct 751  --------------------------------------  750