Nucleotide Global Alignment

Description

• Query: ccsbBroad304_12606
• Subject: XM_011530374.2
• Aligned Length: 1166
• Identities: 767
• Gaps: 352

Alignment

Query    1  ---------------------ATGAGGATGGAGGCCGGGGAGGCAGCGCCGCCGGCGGGGGCGGGCGGCCGCGC  53
                                 |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGCAGACGCCGCGGCCGGCGATGAGGATGGAGGCCGGGGAGGCAGCGCCGCCGGCGGGGGCGGGCGGCCGCGC  74

Query   54  CGCAGGCGGCTGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGT  127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CGCAGGCGGCTGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGT  148

Query  128  GCCGCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGAGACCGGG  201
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GCCGCGAGCAGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGAGACCGGG  222

Query  202  GCCTACCTCATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCT  275
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCCTACCTCATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCT  296

Query  276  GGACAAGGACATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACATCGGCCCGCTGATCCGCATCA  349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GGACAAGGACATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACATCGGCCCGCTGATCCGCATCA  370

Query  350  TCAAAGACCGGATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGCATGTGTACCGCGTGCTGCAG  423
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct  371  TCAAAGACCGGATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGCACGTGTACCGCGTGCTGCAG  444

Query  424  TGCCAGGAGGAGGAGCTCACGCAAATGGTCTCCACCATGTCTGATGGCTGGCGCTTCGAGCAGCTGGTGAACAT  497
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGCCAGGAGGAGGAGCTCACGCAAATGGTCTCCACCATGTCTGATGGCTGGCGCTTCGAGCAGCTGGTGAACAT  518

Query  498  CGGCTCCTCCTACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAGGAGCTCCACAGCA  571
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CGGCTCCTCCTACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAGGAGCTCCACAGCA  592

Query  572  CCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCA-----CGGAGGA-----------------  623
            |||||||||||||||||||||||||||||||||||||||||..||     |..||||                 
Sbjct  593  CCCCAAACGGGCTGAGCTCAGAGTCCAGCCGCAAAACCAAGCCCAGTCATCTCAGGATCCCGCTAACCTTTTCT  666

Query  624  -----------------------------GCAGCTGGAGGAGCAGCAGCAGCAGGAGGAGGAGGTGGAGGAGGT  668
                                         .|.||||||||..|.||..||.|                      
Sbjct  667  CCCTCCCACCACTGCCTCCTCCTCCGCTTCCCGCTGGAGGTCCTGCCTCATC----------------------  718

Query  669  GGAGGTGGAACAGGTGCA----------------GGTGGA-GGCAGATGCACAGGAGAAAGG--------TTCC  717
                          |.||                ..|||| ..||..|||||                  ||||
Sbjct  719  --------------TTCATCCACCTCTTCTTCCTCCTGGATCTCATCTGCAC----------CCTGCCTCTTCC  768

Query  718  C-----------GTCCG-------------------CAC-CCTC---------TCAGACCTGAGGCTGAGCTTG  751
            |           |||||                   ||| ||||         ||.|.|||| |.|..|||.|.
Sbjct  769  CTCTCTGCCCCTGTCCGGGTTTTCTCTCTGCCTGCTCACGCCTCCATCCCGGGTCTGCCCTG-GTCCCAGCCTC  841

Query  752  CAGTGAGGGCTTCTCCTC-------GGCCCCTCGCCCGCC--CCCAGAG----CTGCCAT--------------  798
            |.|||        .||||       |.|||||.||||..|  |||||||    ||||| |              
Sbjct  842  CCGTG--------CCCTCCACCCAGGCCCCCTGGCCCTGCATCCCAGAGCGTCCTGCC-TGCCGCCTCCTGCGC  906

Query  799  CCCTGCTGTTA-----------CAAGCC--------AGAGGC---------------------------ACCCG  826
            ||||.|||.||           |.||||        ||.|||                           ||||.
Sbjct  907  CCCTTCTGGTACCTCCTGCCTCCCAGCCTGGGGAGGAGGGGCGCAGCTGCACCTCCTCTGTGCCCACTAACCCT  980

Query  827  G--------ATGTGA-----GGCCC------CAG---------------ATCACCTCCAGG-------------  853
            |        .|.|||     |||||      |||               .||.|||||.||             
Sbjct  981  GCCGGGCACCTCTGAGACTGGGCCCTGGCTGCAGGCCCTGCCCCCCCTCCTCTCCTCCCGGCCTCCTCCTCACG  1054

Query  854  -----GACTTG-GGGTTCCCATC---------------------------------  870
                 ..|||| .|||||||.||                                 
Sbjct 1055  TTTCCTCCTTGCAGGTTCCCGTCCGCACCCTCTCAGACCTGAGGCTGAGCTTGCAG  1110