Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12606
- Subject:
- XR_001781568.1
- Aligned Length:
- 2131
- Identities:
- 785
- Gaps:
- 1270
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCCAGACTACAGCTCCCGGCATGCCCTGCACCTGGTACTCGCCCGCGGCGTGCGGAGGGAAGGATGCAGACAA 74
Query 1 -----------ATGAGGATGGAGGCCGGGGAGGCAGCGCCGCCGGCGGGGGCGGGCGGCCGCGCCGCAGGCGGC 63
|||||||||||||||||||||||||||||.||||.||||||||||||||||.|||..||||||
Sbjct 75 CGCGGCCGGCGATGAGGATGGAGGCCGGGGAGGCAGCGCCACCGGTGGGGGCGGGCGGCCGCCCCGGGGGCGGC 148
Query 64 TGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGTGCCGCGAGCA 137
||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||.||.|||||
Sbjct 149 TGGGGCAAGTGGGTGCGGCTGAACGTGGGGGGCACGGTGTTCCTGACCACCCGCCAGACGCTGTGTCGGGAGCA 222
Query 138 GAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGAGACCGGGGCCTACCTCA 211
||||||||||||||||||||||||.|||||.||||||||.||.||||||.||||||||||||||||||||||||
Sbjct 223 GAAGTCCTTCCTCAGCCGCCTGTGTCAGGGCGAAGAGCTTCAATCGGACAGGGATGAGACCGGGGCCTACCTCA 296
Query 212 TTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCTGGACAAGGAC 285
|||||||||||||||||||||||||||||||||||||.||||||.|||||||.||..|||||||||||||||||
Sbjct 297 TTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAATTTCCTCAGGCATGGAAAATTGGTGCTGGACAAGGAC 370
Query 286 ATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACATCGGCCCGCTGATCCGCATCATCAAAGACCG 359
|||||.|||||||||||||||||||||||.||||||||||||||.||.||.|||||.||.||||||||||||.|
Sbjct 371 ATGGCCGAGGAGGGGGTCCTGGAGGAAGCAGAGTTCTACAACATTGGTCCTCTGATTCGAATCATCAAAGACAG 444
Query 360 GATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGCATGTGTACCGCGTGCTGCAGTGCCAGGAGG 433
||||||.|||||.||||||||.||..|||||||.|||||.||||||||.|||||.||||||||||||||.||||
Sbjct 445 GATGGAGGAGAAAGACTACACAGTGGCCCAGGTGCCACCTAAGCATGTATACCGAGTGCTGCAGTGCCAAGAGG 518
Query 434 AGGAGCTCACGCAAATGGTCTCCACCATGTCTGATGGCTGGCGCTTCGAGCAGCTGGTGAACATCGGCTCCTCC 507
||||||||||.||.|||||.|||||.|||||.||.|||||||||||||||||||||||||||||||||||||||
Sbjct 519 AGGAGCTCACACAGATGGTATCCACTATGTCCGACGGCTGGCGCTTCGAGCAGCTGGTGAACATCGGCTCCTCC 592
Query 508 TACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAGGAGCTCCACAGCACCCCAAACGG 581
||||||||.||.||.|||||||||||.||||||||||||||||||||.|||||||||||||||.|||||.||||
Sbjct 593 TACAACTATGGGAGTGAGGACCAGGCCGAGTTCCTGTGTGTGGTGTCTAAGGAGCTCCACAGCTCCCCACACGG 666
Query 582 GCTGAGCTCAGAGTCCAGCCGCAAAACCAAGAGCACGGAGGAGCAGCTGGAGGAGCAGCAGCAGCAGGAGGAGG 655
.||||||||.|||||||..|||||..|||||||||||||.|||||||||||||||||||.||.|| |||
Sbjct 667 CCTGAGCTCCGAGTCCACTCGCAAGGCCAAGAGCACGGACGAGCAGCTGGAGGAGCAGCGGCGGC------AGG 734
Query 656 AGGTGGAGGAGGTGGAGGTGGAACAGGTGCAGGTGGAGGCAGATGCACAGGAGAA------------------- 710
|||||||||||||||||||||..|||||||||||||||||.|||||.||||||||
Sbjct 735 AGGTGGAGGAGGTGGAGGTGGCCCAGGTGCAGGTGGAGGCGGATGCCCAGGAGAAAGCCCTGTCATCTCAGGAT 808
Query 711 -------------------------------------------------------------------------- 710
Sbjct 809 CCCGCTAACCTTTTCTCCCTCCCACCACCGCCTCCTCCTCCTCCGCTTCCTGCTGGAGGTCCTGCTTCATCTTC 882
Query 711 -------------------------------------------------------------------------- 710
Sbjct 883 ATCCACCTCCTCTTCCTCCTGGATCTCATCTGCACCCTGCCTCTTCCCTCTCTGCCCCTGCCCAGGTTTCCTCT 956
Query 711 -------------------------------------------------------------------------- 710
Sbjct 957 CCGCCTGCTCCCGTCTCCACCCTGGGGCTGCCCTAGTCCCAGTCTCCCGCGCCCTCTCCCCAAGCCCCCTCGCC 1030
Query 711 -------------------------------------------------------------------------- 710
Sbjct 1031 CTGCATCCCCAAGCATCCTGCCTGCCGCCTCCTTCGCCCCTTCCAGCCCCTCCTGCCTCCTGGCCTGGGGAGGA 1104
Query 711 -------------------------------------------------------------------------- 710
Sbjct 1105 GGGGCGTGGCCGCATCTGCTCTTTGTCCTCCAACCCAGCAGAGCACCTCTGAGGCTGGCCTTGGCCACAGGCCC 1178
Query 711 -------------------------------------AGGTTCCCGTCCGCACCCTCTCAGACCTGAGGCTGAG 747
||||.||.||||||||||||.||||||..||.|||||
Sbjct 1179 CACTCTTCCCACTTGCCTCCTCACGTTTCCTCCTTGCAGGTCCCTGTCCGCACCCTCCCAGACCCAAGCCTGAG 1252
Query 748 CTTGCAGTGAGGGCTTCTCCTCGGCCCCTCGCCCGCCCCCAGAGCTGCCATCCCTGCTGTTACAAGCCAGAGGC 821
|||||||||||.| ||||||||||||.||||||||||||||||||||..|||||||.|||||||||||||||
Sbjct 1253 CTTGCAGTGAGAG---CTCCTCGGCCCCGCGCCCGCCCCCAGAGCTGCCGCCCCTGCTATTACAAGCCAGAGGC 1323
Query 822 ACCCGGATGTGAGGCCCCAGATCACCTCCAGGGACTTGGGGTTCCCATC------------------------- 870
|||||||||||||.|||||||||||||||||||||||||||||||.|||
Sbjct 1324 ACCCGGATGTGAGCCCCCAGATCACCTCCAGGGACTTGGGGTTCCGATCTGAAATCCTTTATTTTTGTACCACG 1397
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1398 GGGTGGGCCCCTGGCCCGAGGAGGAAGACAAGCCCTCTACCTTGTCAGTGCTGCCTGCATCTGCCGGGCTGAGA 1471
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1472 CTCACTCCTGCCTTGGGGCCCAGGCCTGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGGGTCTC 1545
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1546 CAGGCAGAGACGCCAAGGCCAAACTGTGGCACTACCTACCCATATCTTCCAGGCCCTTTTGTCCCCTCACCTGG 1619
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1620 GCGCCCTTGCTGCATGGCGGATACACTCCCTCCCAGTCCCATCATAGCACCTCTTAGAGCCTCAGTCTCTATGG 1693
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1694 CACCATAGGGTCATCCTCTCCTCCCACCTACCTCACAGGGTTGTTGTGAGAATCAGGGAGGATCATGGGGTTCC 1767
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1768 TGGGAGCCCTGAGTGTGTTGGGGCTACAATCATTACCTTCTTAGGGGAAGGGCTCTAGCCCCGCCCCTGTATGG 1841
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1842 GACACTATGGCCTCAGATACTGGTGGGGGACAATGTGAGGACTTTGCCAGGCAGGAAGGAAGTTACAGGCTTAA 1915
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1916 CAGCACCTTGGCCACCACTTCTCTGTGCCACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTGGGATG 1989
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1990 GGGAAGGGGACAGGTGTAACGGGTTGAGCTGTCCCGCCCGTGTCTTGACCACCCCGGGATGGGCACATGTCTGT 2063
Query 871 ----------------------------------------------------------- 870
Sbjct 2064 CAGTTGTGTCCCACCCGCCATGAAATAAAGCTGAACAAACAGGCTTGGCCTGGCTGCCA 2122
