Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12606
- Subject:
- XR_001781569.1
- Aligned Length:
- 2050
- Identities:
- 768
- Gaps:
- 1201
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTCCAGACTACAGCTCCCGGCATGCCCTGCACCTGGTACTCGCCCGCGGCGTGCGGAGGGAAGGATGCAGACA 74
Query 1 ------------ATGAGGATGGAGGCCGGGGAGGCAGCGCCGCCGGCGGGGGCGGGCGGCCGCGCCGCAGGCGG 62
|||||||||||||||||||||||||||||.||||.||||||||||||||||.|||..|||||
Sbjct 75 ACGCGGCCGGCGATGAGGATGGAGGCCGGGGAGGCAGCGCCACCGGTGGGGGCGGGCGGCCGCCCCGGGGGCGG 148
Query 63 CTGGGGCAAGTGGGTGCGGCTCAACGTGGGGGGCACGGTGTTCCTGACCACCCGGCAGACGCTGTGCCGCGAGC 136
|||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||.||.||||
Sbjct 149 CTGGGGCAAGTGGGTGCGGCTGAACGTGGGGGGCACGGTGTTCCTGACCACCCGCCAGACGCTGTGTCGGGAGC 222
Query 137 AGAAGTCCTTCCTCAGCCGCCTGTGCCAGGGGGAAGAGCTGCAGTCGGACCGGGATGAGACCGGGGCCTACCTC 210
|||||||||||||||||||||||||.|||||.||||||||.||.||||||.|||||||||||||||||||||||
Sbjct 223 AGAAGTCCTTCCTCAGCCGCCTGTGTCAGGGCGAAGAGCTTCAATCGGACAGGGATGAGACCGGGGCCTACCTC 296
Query 211 ATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAACTTCCTCCGGCATGGCAAGCTGGTGCTGGACAAGGA 284
||||||||||||||||||||||||||||||||||||||.||||||.|||||||.||..||||||||||||||||
Sbjct 297 ATTGACCGTGACCCCACCTACTTCGGGCCCATCCTGAATTTCCTCAGGCATGGAAAATTGGTGCTGGACAAGGA 370
Query 285 CATGGCTGAGGAGGGGGTCCTGGAGGAAGCCGAGTTCTACAACATCGGCCCGCTGATCCGCATCATCAAAGACC 358
||||||.|||||||||||||||||||||||.||||||||||||||.||.||.|||||.||.||||||||||||.
Sbjct 371 CATGGCCGAGGAGGGGGTCCTGGAGGAAGCAGAGTTCTACAACATTGGTCCTCTGATTCGAATCATCAAAGACA 444
Query 359 GGATGGAAGAGAAGGACTACACGGTCACCCAGGTCCCACCCAAGCATGTGTACCGCGTGCTGCAGTGCCAGGAG 432
|||||||.|||||.||||||||.||..|||||||.|||||.||||||||.|||||.||||||||||||||.|||
Sbjct 445 GGATGGAGGAGAAAGACTACACAGTGGCCCAGGTGCCACCTAAGCATGTATACCGAGTGCTGCAGTGCCAAGAG 518
Query 433 GAGGAGCTCACGCAAATGGTCTCCACCATGTCTGATGGCTGGCGCTTCGAGCAGCTGGTGAACATCGGCTCCTC 506
|||||||||||.||.|||||.|||||.|||||.||.||||||||||||||||||||||||||||||||||||||
Sbjct 519 GAGGAGCTCACACAGATGGTATCCACTATGTCCGACGGCTGGCGCTTCGAGCAGCTGGTGAACATCGGCTCCTC 592
Query 507 CTACAACTACGGCAGCGAGGACCAGGCAGAGTTCCTGTGTGTGGTGTCCAAGGAGCTCCACAGCACCCCAAACG 580
|||||||||.||.||.|||||||||||.||||||||||||||||||||.|||||||||||||||.|||||.|||
Sbjct 593 CTACAACTATGGGAGTGAGGACCAGGCCGAGTTCCTGTGTGTGGTGTCTAAGGAGCTCCACAGCTCCCCACACG 666
Query 581 GGCTGAGCTCAGAGTCCAGCCGCAAAACCAAG----------------------------------------AG 614
|.||||||||.|||||||..|||||..||||| |.
Sbjct 667 GCCTGAGCTCCGAGTCCACTCGCAAGGCCAAGCCCTGTCATCTCAGGATCCCGCTAACCTTTTCTCCCTCCCAC 740
Query 615 CAC--------------------------GGAGGAGCAG----------------------------CTGGA-- 632
||| |||||..|.| |||||
Sbjct 741 CACCGCCTCCTCCTCCTCCGCTTCCTGCTGGAGGTCCTGCTTCATCTTCATCCACCTCCTCTTCCTCCTGGATC 814
Query 633 ------------------------------------------------------------------------GG 634
||
Sbjct 815 TCATCTGCACCCTGCCTCTTCCCTCTCTGCCCCTGCCCAGGTTTCCTCTCCGCCTGCTCCCGTCTCCACCCTGG 888
Query 635 AGCAGC-------------------------------AGC--------------------AGCA---------- 647
.||.|| ||| ||||
Sbjct 889 GGCTGCCCTAGTCCCAGTCTCCCGCGCCCTCTCCCCAAGCCCCCTCGCCCTGCATCCCCAAGCATCCTGCCTGC 962
Query 648 -------------------------------------------GGAGGAGGAG-GTGG---------------- 661
||||||||.| ||||
Sbjct 963 CGCCTCCTTCGCCCCTTCCAGCCCCTCCTGCCTCCTGGCCTGGGGAGGAGGGGCGTGGCCGCATCTGCTCTTTG 1036
Query 662 -----------AG------------GAGG-TGGAGGTGG-AACAGG----------------TG------CAGG 688
|| |||| |||...||| .||||| || ||.|
Sbjct 1037 TCCTCCAACCCAGCAGAGCACCTCTGAGGCTGGCCTTGGCCACAGGCCCCACTCTTCCCACTTGCCTCCTCACG 1110
Query 689 TGGAGGCAGA--------TGCACAGGAGAAAGGTTCCCGTCCGCACCCTCTCAGACCTGAGGCTGAGCTTGCAG 754
| ||| ||||.||.||||||||||||.||||||..||.||||||||||||
Sbjct 1111 T---------TTCCTCCTTGC---------AGGTCCCTGTCCGCACCCTCCCAGACCCAAGCCTGAGCTTGCAG 1166
Query 755 TGAGGGCTTCTCCTCGGCCCCTCGCCCGCCCCCAGAGCTGCCATCCCTGCTGTTACAAGCCAGAGGCACCCGGA 828
||||.| ||||||||||||.||||||||||||||||||||..|||||||.||||||||||||||||||||||
Sbjct 1167 TGAGAG---CTCCTCGGCCCCGCGCCCGCCCCCAGAGCTGCCGCCCCTGCTATTACAAGCCAGAGGCACCCGGA 1237
Query 829 TGTGAGGCCCCAGATCACCTCCAGGGACTTGGGGTTCCCATC-------------------------------- 870
||||||.|||||||||||||||||||||||||||||||.|||
Sbjct 1238 TGTGAGCCCCCAGATCACCTCCAGGGACTTGGGGTTCCGATCTGAAATCCTTTATTTTTGTACCACGGGGTGGG 1311
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1312 CCCCTGGCCCGAGGAGGAAGACAAGCCCTCTACCTTGTCAGTGCTGCCTGCATCTGCCGGGCTGAGACTCACTC 1385
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1386 CTGCCTTGGGGCCCAGGCCTGGGGCCCTCTGGGACCTTGGAAGGCCTGACATGGGTCCTGGGGTCTCCAGGCAG 1459
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1460 AGACGCCAAGGCCAAACTGTGGCACTACCTACCCATATCTTCCAGGCCCTTTTGTCCCCTCACCTGGGCGCCCT 1533
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1534 TGCTGCATGGCGGATACACTCCCTCCCAGTCCCATCATAGCACCTCTTAGAGCCTCAGTCTCTATGGCACCATA 1607
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1608 GGGTCATCCTCTCCTCCCACCTACCTCACAGGGTTGTTGTGAGAATCAGGGAGGATCATGGGGTTCCTGGGAGC 1681
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1682 CCTGAGTGTGTTGGGGCTACAATCATTACCTTCTTAGGGGAAGGGCTCTAGCCCCGCCCCTGTATGGGACACTA 1755
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1756 TGGCCTCAGATACTGGTGGGGGACAATGTGAGGACTTTGCCAGGCAGGAAGGAAGTTACAGGCTTAACAGCACC 1829
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1830 TTGGCCACCACTTCTCTGTGCCACCGTGTGTTTGGCAGCAGAGTACAGTGTCCAGGGACTTGGGATGGGGAAGG 1903
Query 871 -------------------------------------------------------------------------- 870
Sbjct 1904 GGACAGGTGTAACGGGTTGAGCTGTCCCGCCCGTGTCTTGACCACCCCGGGATGGGCACATGTCTGTCAGTTGT 1977
Query 871 ---------------------------------------------------- 870
Sbjct 1978 GTCCCACCCGCCATGAAATAAAGCTGAACAAACAGGCTTGGCCTGGCTGCCA 2029
