Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12616
- Subject:
- NM_001363594.1
- Aligned Length:
- 1632
- Identities:
- 952
- Gaps:
- 669
Alignment
Query 1 ATGATACATGTTAGAAGACATGAAACAAGGAGAAATTCTAAGAGTCACGTGCCTGAGCAGAAATCTCGAGTTGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGATACATGTTAGAAGACATGAAACAAGGAGAAATTCTAAGAGTCACGTGCCTGAGCAGAAATCTCGAGTTGA 74
Query 75 TTGGAGGCGAACTAAAAGAAGTAGTATCTCACAATTACTTGATAGTGATGAAGAGCTTGATAGTGAAGAATTTG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TTGGAGGCGAACTAAAAGAAGTAGTATCTCACAATTACTTGATAGTGATGAAGAGCTTGATAGTGAAGAATTTG 148
Query 149 ATAGTGATGAAGAGCTTGATAGTGATGAAAGTTTTGAAAATGATGAAGAGCTTGATAGTAACAAGGGACCTGAT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 ATAGTGATGAAGAGCTTGATAGTGATGAAAGTTTTGAAAATGATGAAGAGCTTGATAGTAACAAGGGACCTGAT 222
Query 223 TGTAATAAAACACCAGGAAGTGAAAGAGAGCTCAACTTAAGTAAAATTCAAAGTGAAGGAAATGACAGTAAGTG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGTAATAAAACACCAGGAAGTGAAAGAGAGCTCAACTTAAGTAAAATTCAAAGTGAAGGAAATGACAGTAAGTG 296
Query 297 TCTCATTAACTCTGGCAACGGTTCAACATATGAAGAAGAAACGAACAAAATCAAACATAGGAATATTGACTTAC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCTCATTAACTCTGGCAACGGTTCAACATATGAAGAAGAAACGAACAAAATCAAACATAGGAATATTGACTTAC 370
Query 371 AAGATCAGGAAAAACATTTAAGTCAAGAGGATAATGATCTCAACAAACAAACTGGACAAATAATAGAGGATGAT 444
||||||
Sbjct 371 AAGATC-------------------------------------------------------------------- 376
Query 445 GAGGAAAAACATTTAAGTCAAGAGGATAATGATCTCAACAAACAAACTGGACAAATAATAGAGGATGATTTAGA 518
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 377 -AGGAAAAACATTTAAGTCAAGAGGATAATGATCTCAACAAACAAACTGGACAAATAATAGAGGATGATTTAGA 449
Query 519 AGAAGAAGACATCAAGCGAGGAAAAAGAAAAAGGCTATCCTCTGTGATGTGTGACAGTGATGAGAGTGATGACA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 450 AGAAGAAGACATCAAGCGAGGAAAAAGAAAAAGGCTATCCTCTGTGATGTGTGACAGTGATGAGAGTGATGACA 523
Query 593 GCGATATCCTAGTTAGAAAAGTAGGTGTTAAACGTCCCCGTAGAGTGGTTGAAGATGAAGGTTCTTCAGTGGAA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 524 GCGATATCCTAGTTAGAAAAGTAGGTGTTAAACGTCCCCGTAGAGTGGTTGAAGATGAAGGTTCTTCAGTGGAA 597
Query 667 ATGGAGCAAAAGACTCCTGAAAAAACATTAGCTGCACAAAAGCGAGAAAAACTTCAGAAGCTCAAAGAACTCTC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 598 ATGGAGCAAAAGACTCCTGAAAAAACATTAGCTGCACAAAAGCGAGAAAAACTTCAGAAGCTCAAAGAACTCTC 671
Query 741 AAAACAAAGATCTCGTCAGAGACGCAGTAGTGGTAGAGATTTTGAGGACTCTGAAAAGGAATCTTGCCCAAGCA 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 672 AAAACAAAGATCTCGTCAGAGACGCAGTAGTGGTAGAGATTTTGAGGACTCTGAAAAGGAATCTTGCCCAAGCA 745
Query 815 GTGATGAAGTTGATGAGGAGGAAGAAGAGGATAATTATGAATCTGATGAAGATGGAGATGATTATATTATCGAT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 746 GTGATGAAGTTGATGAGGAGGAAGAAGAGGATAATTATGAATCTGATGAAGATGGAGATGATTATATTATCGAT 819
Query 889 GACTTTGTAGTGCAAGATGAGGAGGGTGATGAAGAGAATAAAAACCAACAAGGAGAAAAATTGACTACATCACA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 820 GACTTTGTAGTGCAAGATGAGGAGGGTGATGAAGAGAATAAAAACCAACAAGGAGAAAAATTGACTACATCACA 893
Query 963 ACTGAAATTAGTAAAACAGAATTCTCTTTGTAAGTTCAAT-------------ATTAAGAAAATGTT------- 1016
|||||||||||||||||||||||||||||.|...||.|.| |||..||||..|||
Sbjct 894 ACTGAAATTAGTAAAACAGAATTCTCTTTATTCTTTTAGTGACCACTATACTCATTTTGAAAGAGTTGTGAAGG 967
Query 1017 -TC------------------ATGAAT-TGTTCT-----CA--------------------------------- 1032
|| |||||| |.|||| ||
Sbjct 968 CTCTTCTGATCAACGCTTTAGATGAATCTTTTCTGGGAACATTATATGATGGCACAAGGCAAAAATCATATGCA 1041
Query 1033 -------------------------------------------------------------------------- 1032
Sbjct 1042 AAAGATATGCTAACATCTCTTCATTATTTGGATAACCGCTTTGTTCAGCCTCGTCTAGAGAGCTTGGTATCTAG 1115
Query 1033 -------------------------------------------------------------------------- 1032
Sbjct 1116 AAGTCGTTGGAAAGAGCAATATAAGGAGCGAGTAGAAAATTATTCTAATGTAAGTATTCATTTGAAGAATCCTG 1189
Query 1033 -------------------------------------------------------------------------- 1032
Sbjct 1190 AAAACTGTTCCTGCCAGGCTTGTGGACTGCATCGCTACTGTAAATATTCAGTGCATTTATCAGGAGAGTTGTAT 1263
Query 1033 -------------------------------------------------------------------------- 1032
Sbjct 1264 AACACCAGGACCATGCAAATAGATAATTTCATGTCACATGATAAACAGGTGTTCACTGTTGGCAGAATTTGTGC 1337
Query 1033 -------------------------------------------------------------------------- 1032
Sbjct 1338 CAGCCGTACCAGAATTTATCATAAACTGAAACATTTTAAATTCAAACTATACCAGGAATGTTGCACCATTGCAA 1411
Query 1033 -------------------------------------------------------------------------- 1032
Sbjct 1412 TGACAGAAGAAGTTGAAGATGAACAAGTTAAAGAAACAGTGGAAAGAATTTTCAGGCGGTCAAAAGAAAATGGC 1485
Query 1033 -------------------------------------------------------------------------- 1032
Sbjct 1486 TGGATTAAGGAGAAATATGGTCAACTTGAAGAATATCTCAATTTTGCGGATTACTTTCAAGAAGAGAAGTTTGA 1559
Query 1033 ---- 1032
Sbjct 1560 GTTG 1563
