Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12639
- Subject:
- XM_006510906.3
- Aligned Length:
- 3065
- Identities:
- 1290
- Gaps:
- 1606
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGTTTCCTATCTCACGAGCTGTCTCAGTGCCCTGAGCACCCTCCTGCTGCTGCTTGGTTCTCAGCTTGTCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCCGCAGCCTTCCACTGAACACAGAAAGGTCCCACAACGGATGGCAGTGACCGAGGGAACCCCAGAGGACAGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAGTGGCTCCCCAGGTGTGTGGGGCTCCTGGGGCCCCTGGTCTGCCTGTTCTCGCAGCTGCAGTGGTGGTGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGGAGCAGACACGGCCCTGCCTGCCCAGCTCCTACCGTGCTCGAGGAGGCTCCCGGCCCAATGGCCGTGCACT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTCCATCACTGGCCACGTTGTGTCAGCCGTACGGACCTCAGTACCACTGCATCGAAGCCAGGAGGACCAAAGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCCTGGCTGGCTCCAATGCTAGCCGCCAAGGCCCTGCAGTGGTGCGAGGCAGCCGACATCCACAGGCCCGGGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGTGAACCCTCAGAGAGAAGGAGCAGGACCCGAGGTCCTATTGGCCCTGGCAAGTATGGCTATGGGAAGGCTCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTACATCTTACCACTGCAGACGGATACCACGCATACTCCACAGAGGCTTCGGAGACAGAGGCCTTCATCCAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACTCCAGGTCCCAGGAGGCATCTGCTTCTAAGCAGGGCTATCGGCCACCAACCCATCAGTTCTCCCACAGCCAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTCTCTACCAGAGTGACAGTGGCCCTCGCTCTGGACTGCCACCTTCTGAGGCTTCTATCTACCAGCTGCCCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GACTCACGACCAAAGCTATCCTGCAGCGTCGAGTCTCTTCCACAGACCGGAACTGAGCAGCCACCATGGTGCTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCCCCACGGGGCAGCTCAAGCCTTTCCCCAGCATCTGCGATCAACAGCAATCTCCTGCATCGGGGCCTATCGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CAGTACAAACTGTGCAACACCAATGCGTGTCCAGAAAGTGGTAGAAGTATCCGGGAGGTACAGTGTGCATCCTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAACAACAAGCCATTCATGGGCCGGTTTTATGAATGGGAACCATTTGCAGAAGTAAAGGGTAATCGCAAGTGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGCTGAACTGCCAGGCAACCGGCTACCGCTTCTACGTCCGGCAAGCTGAGAAGGTCATCGATGGCACACCCTGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATCAGAATGGCACGGCAATCTGTGTGTCGGGGCAGTGCAAGAGCATTGGCTGTGACGACTTCCTGGGATCTGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAAAGTCTTGGACAAGTGCGGGGTGTGTGGAGGTGATAACACGGGCTGCCAGGTGGTGTCGGGAGTGTTCAAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACGCCCTCACCAGCCTGGGCTACCACCGGGTTGTAGAGATTCCCCAAGGAGCTACGAAAATTAACATTACAGAG 1332
Query 1 ATGTACAAGAGCAACAACTATTTGGCCCTGAGAAGTCGTTCTGGACGCTCCATCATCAATGGGAACTGGGCAAT 74
|||.||||||||||||||||.||.|||.||.|||||||.|||||.|||||||||||||||||||||||||||||
Sbjct 1333 ATGCACAAGAGCAACAACTACTTAGCCTTGCGAAGTCGCTCTGGCCGCTCCATCATCAATGGGAACTGGGCAAT 1406
Query 75 TGATCGACCAGGAAAATACGAGGGCGGAGGGACCATGTTCACCTACAAGCGTCCAAATGAGATTTCGAGCACTG 148
.|||||.||.||.||.|||||||||||||||||.||||||||||||||.||.||.||.|||.|.||.|||||||
Sbjct 1407 CGATCGCCCGGGGAAGTACGAGGGCGGAGGGACAATGTTCACCTACAAACGACCGAACGAGGTCTCCAGCACTG 1480
Query 149 CCGGAGAGTCCTTTTTGGCGGAAGGTCCCACCAACGAGATCTTGGATGTCTACATGATACACCAGCAGCCAAAC 222
|.||.|||||||||.||||.||.||||||||.||.||||||.||||||||||.|||||||||||||||||.|||
Sbjct 1481 CGGGGGAGTCCTTTCTGGCTGAGGGTCCCACTAATGAGATCCTGGATGTCTATATGATACACCAGCAGCCCAAC 1554
Query 223 CCAGGCGTGCACTACGAGTACGTGATCATGGGGACCAACGCCATCAGCCCCCAGGTGCCACCCCACAGGAGACC 296
|||||.||.|||||.|||||||||||||||.|||..||.|||||||||||.|||||||||||.|||||||||||
Sbjct 1555 CCAGGAGTCCACTATGAGTACGTGATCATGAGGAATAATGCCATCAGCCCACAGGTGCCACCACACAGGAGACC 1628
Query 297 AGGGGAACCCTTCAATGGCCAGATGG-TGACAGAAGGCAGGAGCCAGGAGGAGGGAGAACAGAAAGGGAG--GA 367
|||.|||||.||||||||.|||.||| .|| .||||.|||..||||||||||..|||| |||.|||||| ||
Sbjct 1629 AGGAGAACCTTTCAATGGGCAGCTGGAAGA-GGAAGACAGAGGCCAGGAGGACAGAGA--AGAGAGGGAGAAGA 1699
Query 368 ACGAGGAGAAGGAAGACTTGCGTGGGGAGGCCCCTGAGATGTTCACCTCAGAATCGGCACAGACCTTCCCAGTC 441
||.||||.||||||||||..|..|..||||||||||||.|.|||||.||||||||..|.|||||||||||||||
Sbjct 1700 ACCAGGAAAAGGAAGACTCACAAGTCGAGGCCCCTGAGGTATTCACGTCAGAATCCACGCAGACCTTCCCAGTC 1773
Query 442 AGGCATCCAGACAGATTTTCTCCCCATCGACCGGACAACTTGGTGCCACCAGCACCGCAGCCCCCACGGCGCAG 515
||||||||.||.|||||..||.||||.|||||.||||||||||||||.||||||||.|||||||||.||||.||
Sbjct 1774 AGGCATCCGGAGAGATTCCCTTCCCACCGACCAGACAACTTGGTGCCCCCAGCACCACAGCCCCCAAGGCGAAG 1847
Query 516 CCGGGATCACAACTGGAAGCAGCTTGGGACAACAGAATGTTCCACGACCTGTGGGAAAGGATCGCAGTACCCTA 589
||||||.|||||||||||||||||.||||||||||||||.|||||.||||||||||||||||||||||||||||
Sbjct 1848 CCGGGACCACAACTGGAAGCAGCTGGGGACAACAGAATGCTCCACCACCTGTGGGAAAGGATCGCAGTACCCTA 1921
Query 590 TTTTCCGCTGTGTGCACAGAAGCACTCATGAAGAGGCTCCTGAGAGTTACTGTGACTCCAGCATGAAGCCGACC 663
|.||||||||.||||||||||.|||.||.||.||||.|||.|||||.|||||||||||||||||||||||||||
Sbjct 1922 TCTTCCGCTGCGTGCACAGAAACACACACGAGGAGGTTCCCGAGAGCTACTGTGACTCCAGCATGAAGCCGACC 1995
Query 664 CCCGAGGAGGAGCCCTGCAACATCTTCCCTTGCCCAGCCTTCTGGGACATCGGGGAGTGGTCTGAGTGCAGCAA 737
||.||||||||.|||||||||.|||||||.||||||||||||||||||||||||||||||||.|||||||||||
Sbjct 1996 CCAGAGGAGGAACCCTGCAACCTCTTCCCCTGCCCAGCCTTCTGGGACATCGGGGAGTGGTCGGAGTGCAGCAA 2069
Query 738 GACCTGTGGCCTGGGCATGCAGCACCGCCAGGTTCTGTGCCGCCAGGTGTACGCCAACCGCAGCCTGACGGTGC 811
|||||||||.|||||||||||||||||||||||.|||||.|||||||||||.||||||||.|||||||||||||
Sbjct 2070 GACCTGTGGTCTGGGCATGCAGCACCGCCAGGTCCTGTGTCGCCAGGTGTATGCCAACCGTAGCCTGACGGTGC 2143
Query 812 AGCCCTACCGCTGCCAGCACCTGGAGAAACCTGAGACCACCAGCACCTGCCAACTCAAGATCTGCAGCGAGTGG 885
|.||||||||||||||||||||||||||.||.||||||||||||||||||||.|||||||||||||||||||||
Sbjct 2144 AACCCTACCGCTGCCAGCACCTGGAGAAGCCAGAGACCACCAGCACCTGCCAGCTCAAGATCTGCAGCGAGTGG 2217
Query 886 CAGATCCGGACCGACTGGACCTCGTGCTCGGTGCCCTGCGGCGTGGGACAGAGGACCCGTGATGTGAAGTGTGT 959
|||||.|||||||||||||||||||||||.||||||||.||||||||.|||.|||||||.||.|||||||||||
Sbjct 2218 CAGATTCGGACCGACTGGACCTCGTGCTCAGTGCCCTGTGGCGTGGGGCAGCGGACCCGAGACGTGAAGTGTGT 2291
Query 960 GAGCAACATTGGGGATGTGGTTGACGATGAGGAATGCAACATGAAGCTCCGGCCGAATGACATTGAGAACTGCG 1033
|||||||||.|||||..||||..|.||.|||||.||||||||||||||||||||.||||||||.||||||||.|
Sbjct 2292 GAGCAACATCGGGGACATGGTGCATGACGAGGAGTGCAACATGAAGCTCCGGCCAAATGACATCGAGAACTGTG 2365
Query 1034 ACATGGGACCCTGTGCCAAGAGCTGGTTCCTCACCGAGTGGAGCGAAAGGTGCTCAGCGGAGTGTGGGGCCGGA 1107
|||||||.||||||||.|||||||||||||||||.||||||||.||||||||||||||||||||||||||.|||
Sbjct 2366 ACATGGGGCCCTGTGCGAAGAGCTGGTTCCTCACAGAGTGGAGTGAAAGGTGCTCAGCGGAGTGTGGGGCAGGA 2439
Query 1108 GTGCGGACACGCTCGGTGGTGTGCATGACCAACCATGTCAGCAGCCTGCCCCTGGAGGGCTGTGGGAACAACCG 1181
|||.|||||||.||.||||||||||||||||||||.||||||||||||||..||||.|||||||||||||||.|
Sbjct 2440 GTGAGGACACGTTCAGTGGTGTGCATGACCAACCACGTCAGCAGCCTGCCGTTGGAAGGCTGTGGGAACAACAG 2513
Query 1182 GCCGGCAGAGGCCACCCCATGTGACAACGGACCCTGCACGGGCAAGGTGGAGTGGTTTGCCGGGAGCTGGAGTC 1255
|||.|..|||||.||.||.||||||||.||.||||||||.|||||||||||||||||..|.||.||||||||||
Sbjct 2514 GCCAGTGGAGGCTACGCCGTGTGACAATGGGCCCTGCACAGGCAAGGTGGAGTGGTTCACTGGCAGCTGGAGTC 2587
Query 1256 AGTGTTCCATCGAGTGTGGGAGCGGGACGCAACAGAGGGAGGTGATTTGTGTTAGAAAGAATGCAGACACCTTT 1329
|||||||||||||||||||.||.|||||.||.||||||||.|||||.||||||||.||||||||||||||||||
Sbjct 2588 AGTGTTCCATCGAGTGTGGCAGTGGGACACAGCAGAGGGAAGTGATCTGTGTTAGGAAGAATGCAGACACCTTT 2661
Query 1330 GAAGTGTTGGACCCCTCTGAATGTTCTTTCCTGGAGAAACCCCCCAGCCAGCAATCCTGCCACCTCAAGCCTTG 1403
||||||.|.|||||.|.|||.|||||.|||||||||||.|||||.||||||||..|||||||||||||||||||
Sbjct 2662 GAAGTGCTAGACCCTTATGAGTGTTCATTCCTGGAGAAGCCCCCAAGCCAGCAGGCCTGCCACCTCAAGCCTTG 2735
Query 1404 CGGAGCCAAATGGTTTAGCACCGAATGGAGCATGAGTCTACAAAGAGC-------------------------- 1451
.|||||.||||||||||||||.||||||||||||.| || |.||||||
Sbjct 2736 TGGAGCTAAATGGTTTAGCACAGAATGGAGCATGTG-CT-CCAAGAGCTGTCAGGGCGGATTCCGGGTGCGGGA 2807
Query 1452 ---------------------CATGCTCACCAGGCCAAGT---------------------------------- 1470
|||| ||| ||||||
Sbjct 2808 AGTTCGGTGTCTCTCAGATGACATG---ACC---CCAAGTAGCCTCTGCGACCCCCAGTTGAAACCAGAAGAGA 2875
Query 1471 -------------------------------------------------------------------------- 1470
Sbjct 2876 GAGAGTCTTGTAACACTCAGGACTGTGTCCCTGAAGTTGATGAAAACTGCAAGGACAAGTACTACAACTGCAAC 2949
Query 1471 -------------------------------------------------------------------------- 1470
Sbjct 2950 GTGGTGGTCCAGGCACGCCTCTGTGTCTACAACTACTACAAGACTGCCTGCTGTGCCTCTTGCACCCGAGTGGC 3023
Query 1471 ------------------------------- 1470
Sbjct 3024 TAACAGACACGTGGGCTTTCTGGGGAGCCGA 3054
