Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12674
Subject:
NR_026711.1
Aligned Length:
2336
Identities:
490
Gaps:
1816

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TTGTTTTCTTTTATTTATTTATTTAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTTGCAGTGAGCCGAGAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGCATTATTGTACTCCAGTCTGGGTAAGAAGAGCTAAACTCCAGAGTCTGTCTCAGAAAAAGGAAAACAGCTGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AATATAGGAGACTGACGCCCAGCCCAGGAACAGGTAAGCTGGGTGCACGCGCCGTGAAAACAGCACCTAGGCCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTCCGGTTCTCGCTTTGCAGATGCCTCCTGAACCTCAGTGCCTCCTAAGGTCAAGGCTGTGAGTTAAAGGGCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCACCCCAGCCCAGCCCCAGGTTGGCCCAGCCATTCCCTGGTGGAGGGGCCAGGGAGGAAAGGGGGCTGTGTGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCACCAGAGGGTGAACTGAGGTCTGAGGGTCGGGACACAGGCCGGGAACAGCAGCTGGGAGCGGAGCACGGGGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAACGTGGATGCGCTGAGCTCCCTACAACCGCAGTGAGCATGTGCCCAGGAGGGCCTCACGGGGTGGGTGTGAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCTGGCCTGCCTGGGCTCGGGGTGGGGGGTGTTTACAGACGCATTTCAGCCCCGCAGCAGGGGCTGGGGAGGTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCGCTCGTGACAGTCTCTGCACCAAGGCAGGAGAGATGGAAGCCGCCCAGAGAACTGCCACTCCATAGCCTGTG  666

Query    1  ------------------------ATGGCGTCCCATGGAGGAAACACACTGGAAATCGTGCAGAAGATGGGAAG  50
                                    ||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GGCATCCAGGGGTGAGCGGCAGCGATGGCGCCCCATGGAGGAAACACACTGGAAATCGTGCAGAAGATGGGAAG  740

Query   51  ATGCAGGCTGGAGTGCGGAGAAGGACTGAGACCCTGCCTGGTAGACGGCACCGTCACAGCAGCCGTCTGCCTGC  124
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ATGCAGGCTGGAGTGCGGAGAAGGACTGAGACCCTGCCTGGTAGACGGCACCGTCACAGCAGCCGTCTGCCTGC  814

Query  125  TAGGAGGAGCGTCTCCACCAGCAGCAGGCCGGCCCCTGAGGGAGACAGCAGAGAGCTGGAGTCCTGGCCAGCCA  198
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TAGGAGGAGCGTCTCCACCAGCAGCAGGCCGGCCCCTGAGGGAGACAGCAGAGAGCTGGAGTCCTGGCCAGCCA  888

Query  199  GGCGGGGATCCTTCAGCAGGACACAGGGGACACAGCAGGCAACAGGAGCTCAGAACGCTCTCGGCGACCTTGCT  272
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct  889  GGCGGGGATCCTTCAGCAGGACACAGGGGACACAGCAGGCAACAGGAGCTCAGAACGCTCTCGGCGACCCTGCT  962

Query  273  GAGTAACTTGTGGACTTTGTCGTCTGGCCAGTCATGCAGGATCCGGCACAGGACGTACAGCTCAGCGCTGGGGA  346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GAGTAACTTGTGGACTTTGTCGTCTGGCCAGTCATGCAGGATCCGGCACAGGACGTACAGCTCAGCGCTGGGGA  1036

Query  347  GGGGGTCCCTGAAAAAGTCACCTGGTTTAAAGACAAAACGAGATACGTCCGTCAGGTATGGAAGA---------  411
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||..|..|||||         
Sbjct 1037  GGGGGTCCCTGAAAAAGTCACCTGGTTTAAAGACAAAACGAGATACGTCCGTCAGAGACAGAAGAGGAGACAGA  1110

Query  412  --------AGCAGTCCTC-----CCCGGA--CAGATCCTGG---GA--CGGCCACCCGCATCCTAAATCAGGGA  465
                    ||.||.||.|     ..||||  ||||..||||   ||  |||||||..||        .||||||
Sbjct 1111  CACAGAGGAGAAGGCCACGTGGAGACGGAGGCAGAGACTGGAGTGATGCGGCCACAAGC--------CCAGGGA  1176

Query  466  C------AG------------AGAAGAGGGGTGTGGGCGGGAATGGGTCTTCC---------------------  500
            |      ||            .|||||        |||||||| ||.||.|||                     
Sbjct 1177  CGCCTGGAGCCCCCAGGAGCTGGAAGA--------GGCGGGAA-GGATCCTCCCCTAGAGCCTCTCAGAAAGAA  1241

Query  501  TGAAGTACATCCCC----------GTGGGGAC-TTGAACAGAGC--TCCA------------------------  537
            |.||..|||.|..|          ||||.||| |..||.|||.|  ||||                        
Sbjct 1242  TCAAACACAACTGCAATGGGTTGGGTGGTGACGTCCAAAAGATCTGTCCAAGTCCTAAGCCCCAGAACCTGGGA  1315

Query  538  --------------------------------------------------------------------------  537
                                                                                      
Sbjct 1316  ATGGGACCTCATTTGGATAAAGTTTCTTTGCAGATGTAATTAAGGATCTGGAGATGGGATCATCCTGGAGTAGG  1389

Query  538  --------------------------------------------------------------------------  537
                                                                                      
Sbjct 1390  GTGGGCCCTAAATGCAATGGCAGGTGTCCTTCTAAGAGACAGAAGAGGAGACACACAGAGGAGAAGGCCACGTG  1463

Query  538  --------------------------------------------------------------------------  537
                                                                                      
Sbjct 1464  GAGATGGAGGCAGAGACTGGAGTGATGCGGCTACAAGCCCAGGGACACCCGGAGCCCCCAGGAGCTGGGAGAGG  1537

Query  538  --------------------------------------------------------------------------  537
                                                                                      
Sbjct 1538  CAGGAAGGATCCTCCCCTAGAGCCTCCAGAGGGAGCACAGCCCTGAGATGCCTTGATCTCAGACCTCCGGTCTG  1611

Query  538  --------------------------------------------------------------------------  537
                                                                                      
Sbjct 1612  CAGGACAGGGAGAGGATAAATAGCAAGCTATCTGGCAAATCAGAAGCACAGCTATCATGATGTCCTGCAGGAGG  1685

Query  538  --------------------------------------------------------------------------  537
                                                                                      
Sbjct 1686  AGCTGTAGGGTGGTTGCGTTTTGTTTTTTTAAAAACGAGAAAAGCATCCAGGAACCTCTGGGGGAGGGTTGTGG  1759

Query  538  --------------------------------------------------------------------------  537
                                                                                      
Sbjct 1760  AGGTCCCCAGCACCTGTGCCCACAGGCCTGGCCGCTGTCGGATGGTGCTGAGTTACAGCACGTCAGCTGTCTCT  1833

Query  538  --------------------------------------------------------------------------  537
                                                                                      
Sbjct 1834  TTTTTTATTTTTTTATTTTTTTTGAGATGGAGTTTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTC  1907

Query  538  --------------------------------------------------------------------------  537
                                                                                      
Sbjct 1908  GGCTCACGGCAAGCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAATAGGTGGGATTATAG  1981

Query  538  --------------------------------------------------------------------------  537
                                                                                      
Sbjct 1982  GCACCCGCCACCATGCCTGGCTAATTTCTGTAATTTTAGTAGAGATGGGGTTTCACCATGTTGCTCTGGCTGGT  2055

Query  538  --------------------------------------------------------------------------  537
                                                                                      
Sbjct 2056  CTCAAACTCCTGACCTCAGGTGATCCACCCGCCTCAGCCTCCCAGAGGGCTGGGATTCCAGGCGTCTCCTGTCA  2129

Query  538  --------------------------------------------------------------------------  537
                                                                                      
Sbjct 2130  ATCCGTCCTGGCCTCAGCAGCTGCCACCTGGAAGTTCTCCTTCAAGTCTAACCTAAGGCCACACTGTGACGGCT  2203

Query  538  --------------------------------------------------------------------------  537
                                                                                      
Sbjct 2204  CTCGGGTCAGTTCCTTCCGTGACCTCGGCACCGTGGATGCCCATGAATGCTGATCTCGGCTGTTCCCCATCTCC  2277

Query  538  ------------------------------------------  537
                                                      
Sbjct 2278  ACTCCCCTCACGTCTCGGCTACTTGCACTGATGATAACTTCA  2319

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