Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12674
- Subject:
- NR_026711.1
- Aligned Length:
- 2336
- Identities:
- 490
- Gaps:
- 1816
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTGTTTTCTTTTATTTATTTATTTAGACGGAGTCTCACTCTGTCGCCCAGGCTGGAGTTGCAGTGAGCCGAGAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCATTATTGTACTCCAGTCTGGGTAAGAAGAGCTAAACTCCAGAGTCTGTCTCAGAAAAAGGAAAACAGCTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AATATAGGAGACTGACGCCCAGCCCAGGAACAGGTAAGCTGGGTGCACGCGCCGTGAAAACAGCACCTAGGCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTCCGGTTCTCGCTTTGCAGATGCCTCCTGAACCTCAGTGCCTCCTAAGGTCAAGGCTGTGAGTTAAAGGGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCACCCCAGCCCAGCCCCAGGTTGGCCCAGCCATTCCCTGGTGGAGGGGCCAGGGAGGAAAGGGGGCTGTGTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCACCAGAGGGTGAACTGAGGTCTGAGGGTCGGGACACAGGCCGGGAACAGCAGCTGGGAGCGGAGCACGGGGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAACGTGGATGCGCTGAGCTCCCTACAACCGCAGTGAGCATGTGCCCAGGAGGGCCTCACGGGGTGGGTGTGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCTGGCCTGCCTGGGCTCGGGGTGGGGGGTGTTTACAGACGCATTTCAGCCCCGCAGCAGGGGCTGGGGAGGTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCGCTCGTGACAGTCTCTGCACCAAGGCAGGAGAGATGGAAGCCGCCCAGAGAACTGCCACTCCATAGCCTGTG 666
Query 1 ------------------------ATGGCGTCCCATGGAGGAAACACACTGGAAATCGTGCAGAAGATGGGAAG 50
||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GGCATCCAGGGGTGAGCGGCAGCGATGGCGCCCCATGGAGGAAACACACTGGAAATCGTGCAGAAGATGGGAAG 740
Query 51 ATGCAGGCTGGAGTGCGGAGAAGGACTGAGACCCTGCCTGGTAGACGGCACCGTCACAGCAGCCGTCTGCCTGC 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATGCAGGCTGGAGTGCGGAGAAGGACTGAGACCCTGCCTGGTAGACGGCACCGTCACAGCAGCCGTCTGCCTGC 814
Query 125 TAGGAGGAGCGTCTCCACCAGCAGCAGGCCGGCCCCTGAGGGAGACAGCAGAGAGCTGGAGTCCTGGCCAGCCA 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TAGGAGGAGCGTCTCCACCAGCAGCAGGCCGGCCCCTGAGGGAGACAGCAGAGAGCTGGAGTCCTGGCCAGCCA 888
Query 199 GGCGGGGATCCTTCAGCAGGACACAGGGGACACAGCAGGCAACAGGAGCTCAGAACGCTCTCGGCGACCTTGCT 272
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||
Sbjct 889 GGCGGGGATCCTTCAGCAGGACACAGGGGACACAGCAGGCAACAGGAGCTCAGAACGCTCTCGGCGACCCTGCT 962
Query 273 GAGTAACTTGTGGACTTTGTCGTCTGGCCAGTCATGCAGGATCCGGCACAGGACGTACAGCTCAGCGCTGGGGA 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAGTAACTTGTGGACTTTGTCGTCTGGCCAGTCATGCAGGATCCGGCACAGGACGTACAGCTCAGCGCTGGGGA 1036
Query 347 GGGGGTCCCTGAAAAAGTCACCTGGTTTAAAGACAAAACGAGATACGTCCGTCAGGTATGGAAGA--------- 411
|||||||||||||||||||||||||||||||||||||||||||||||||||||||..|..|||||
Sbjct 1037 GGGGGTCCCTGAAAAAGTCACCTGGTTTAAAGACAAAACGAGATACGTCCGTCAGAGACAGAAGAGGAGACAGA 1110
Query 412 --------AGCAGTCCTC-----CCCGGA--CAGATCCTGG---GA--CGGCCACCCGCATCCTAAATCAGGGA 465
||.||.||.| ..|||| ||||..|||| || |||||||..|| .||||||
Sbjct 1111 CACAGAGGAGAAGGCCACGTGGAGACGGAGGCAGAGACTGGAGTGATGCGGCCACAAGC--------CCAGGGA 1176
Query 466 C------AG------------AGAAGAGGGGTGTGGGCGGGAATGGGTCTTCC--------------------- 500
| || .||||| |||||||| ||.||.|||
Sbjct 1177 CGCCTGGAGCCCCCAGGAGCTGGAAGA--------GGCGGGAA-GGATCCTCCCCTAGAGCCTCTCAGAAAGAA 1241
Query 501 TGAAGTACATCCCC----------GTGGGGAC-TTGAACAGAGC--TCCA------------------------ 537
|.||..|||.|..| ||||.||| |..||.|||.| ||||
Sbjct 1242 TCAAACACAACTGCAATGGGTTGGGTGGTGACGTCCAAAAGATCTGTCCAAGTCCTAAGCCCCAGAACCTGGGA 1315
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1316 ATGGGACCTCATTTGGATAAAGTTTCTTTGCAGATGTAATTAAGGATCTGGAGATGGGATCATCCTGGAGTAGG 1389
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1390 GTGGGCCCTAAATGCAATGGCAGGTGTCCTTCTAAGAGACAGAAGAGGAGACACACAGAGGAGAAGGCCACGTG 1463
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1464 GAGATGGAGGCAGAGACTGGAGTGATGCGGCTACAAGCCCAGGGACACCCGGAGCCCCCAGGAGCTGGGAGAGG 1537
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1538 CAGGAAGGATCCTCCCCTAGAGCCTCCAGAGGGAGCACAGCCCTGAGATGCCTTGATCTCAGACCTCCGGTCTG 1611
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1612 CAGGACAGGGAGAGGATAAATAGCAAGCTATCTGGCAAATCAGAAGCACAGCTATCATGATGTCCTGCAGGAGG 1685
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1686 AGCTGTAGGGTGGTTGCGTTTTGTTTTTTTAAAAACGAGAAAAGCATCCAGGAACCTCTGGGGGAGGGTTGTGG 1759
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1760 AGGTCCCCAGCACCTGTGCCCACAGGCCTGGCCGCTGTCGGATGGTGCTGAGTTACAGCACGTCAGCTGTCTCT 1833
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1834 TTTTTTATTTTTTTATTTTTTTTGAGATGGAGTTTTGCTGTGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTC 1907
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1908 GGCTCACGGCAAGCTCCGCCTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAATAGGTGGGATTATAG 1981
Query 538 -------------------------------------------------------------------------- 537
Sbjct 1982 GCACCCGCCACCATGCCTGGCTAATTTCTGTAATTTTAGTAGAGATGGGGTTTCACCATGTTGCTCTGGCTGGT 2055
Query 538 -------------------------------------------------------------------------- 537
Sbjct 2056 CTCAAACTCCTGACCTCAGGTGATCCACCCGCCTCAGCCTCCCAGAGGGCTGGGATTCCAGGCGTCTCCTGTCA 2129
Query 538 -------------------------------------------------------------------------- 537
Sbjct 2130 ATCCGTCCTGGCCTCAGCAGCTGCCACCTGGAAGTTCTCCTTCAAGTCTAACCTAAGGCCACACTGTGACGGCT 2203
Query 538 -------------------------------------------------------------------------- 537
Sbjct 2204 CTCGGGTCAGTTCCTTCCGTGACCTCGGCACCGTGGATGCCCATGAATGCTGATCTCGGCTGTTCCCCATCTCC 2277
Query 538 ------------------------------------------ 537
Sbjct 2278 ACTCCCCTCACGTCTCGGCTACTTGCACTGATGATAACTTCA 2319
