Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12695
- Subject:
- XM_017028080.2
- Aligned Length:
- 2559
- Identities:
- 1179
- Gaps:
- 1362
Alignment
Query 1 ATGGGCTGGAGGCCCCGGAGAGCTCGGGGGACCCCGTTGCTGCTGCTGCTACTACTGCTGCTGCTCTGGCCAGT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGCTGGAGGCCCCGGAGAGCTCGGGGGACCCCGTTGCTGCTGCTGCTACTACTGCTGCTGCTCTGGCCAGT 74
Query 75 GCCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGGACAAC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGGACAAC 148
Query 149 CCTGGCGCACCGTCAGCCTGGAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTGGCCCTGGAGGCTGAAGGC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCTGGCGCACCGTCAGCCTGGAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTGGCCCTGGAGGCTGAAGGC 222
Query 223 CAGGAGCTCCTGCTTGAGCTGGAGAAGAACCACAGGCTGCTGGCCCCAGGATACATAGAAACCCACTACGGCCC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAGGAGCTCCTGCTTGAGCTGGAGAAGAACCACAGGCTGCTGGCCCCAGGATACATAGAAACCCACTACGGCCC 296
Query 297 AGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACAC-------------------------------------- 332
||||||||||||||||||||||||||||||||||||
Sbjct 297 AGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACACGGTGAGATGCTTCCATGGGCTCTGGGATGCACCGCCAG 370
Query 333 -GGATCATTGCCACTACCAAGGGCGAGTAAGGGGCTTCCCCGACTCCTGGGTAGTCCTCTGCACCTGCTCTGGG 405
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGATCATTGCCACTACCAAGGGCGAGTAAGGGGCTTCCCCGACTCCTGGGTAGTCCTCTGCACCTGCTCTGGG 444
Query 406 ATGAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAGGA 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATGAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAGGA 518
Query 480 CTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCTGTGGCCACAGGGATCCTG 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCTGTGGCCACAGGGATCCTG 592
Query 554 GGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGGGGCAGGCGAGAAGCGCGCAGGACCCGG 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGGGGCAGGCGAGAAGCGCGCAGGACCCGG 666
Query 628 AAGTACCTGGAACTGTACATTGTGGCAGACCACACCCTGTTCTTGACTCGGCACCGAAACTTGAACCACACCAA 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGTACCTGGAACTGTACATTGTGGCAGACCACACCCTGTTCTTGACTCGGCACCGAAACTTGAACCACACCAA 740
Query 702 ACAGCGTCTCCTGGAAGTCGCCAACTACGTGGACCAGCTTCTCAGGACTCTGGACATTCAGGTGGCGCTGACCG 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACAGCGTCTCCTGGAAGTCGCCAACTACGTGGACCAGCTTCTCAGGACTCTGGACATTCAGGTGGCGCTGACCG 814
Query 776 GCCTGGAGGTGTGGACCGAGCGGGACC----------------------------------------------- 802
|||||||||||||||||||||||||||
Sbjct 815 GCCTGGAGGTGTGGACCGAGCGGGACCGCAGCCGCGTCACGCAGGACGCCAACGCCACGCTCTGGGCCTTCCTG 888
Query 803 -------------------------------------------------------------------------- 802
Sbjct 889 CAGTGGCGCCGGGGGCTGTGGGCGCAGCGGCCCCACGACTCCGCGCAGCTGCTCACGTGGGTGCCTCTGACCCG 962
Query 803 -------------------------------------------------------------------------- 802
Sbjct 963 GACGCGGGTCCCGGGTGGGGCGGCCTCACCTCCCGGCCCCGCCTGGTCACGCCGCGCTCCGCCCCCAGGGGCCG 1036
Query 803 -------------------------------------------------------------------------- 802
Sbjct 1037 CGCCTTCCAGGGCGCCACAGTGGGCCTGGCGCCCGTCGAGGGCATGTGCCGCGCCGAGAGCTCGGGAGGCGACC 1110
Query 803 -------------------------------------------------------------------------- 802
Sbjct 1111 ACTCGGAGCTCCCCATCGGCGCCGCAGCCACCATGGCCCATGAGATCGGCCACAGCCTCGGCCTCAGCCACGAC 1184
Query 803 -------------------------------------------------------------------------- 802
Sbjct 1185 CCCGACGGCTGCTGCGTGGAGGCTGCGGCCGAGTCCGGAGGCTGCGTCATGGCTGCGGCCACCGGGCACCCGTT 1258
Query 803 --------------------GCAGCCGCCGCCAGCTGCGCGCCTTCTTCCGCAAGGGGGGCGGCGCTTGCCTCT 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCCGCGCGTGTTCAGCGCCTGCAGCCGCCGCCAGCTGCGCGCCTTCTTCCGCAAGGGGGGCGGCGCTTGCCTCT 1332
Query 857 CCAATGCCCCGGACCCCGGACTCCCGGTGCCGCCGGCGCTCTGCGGGAACGGCTTCGTGGAAGCGGGCGAGGAG 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CCAATGCCCCGGACCCCGGACTCCCGGTGCCGCCGGCGCTCTGCGGGAACGGCTTCGTGGAAGCGGGCGAGGAG 1406
Query 931 TGTGACTGCGGCCCTGGCCAGGAGTGCCGCGACCTCTGCTGCTTTGCTCACAACTGCTCGCTGCGCCCGGGGGC 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGTGACTGCGGCCCTGGCCAGGAGTGCCGCGACCTCTGCTGCTTTGCTCACAACTGCTCGCTGCGCCCGGGGGC 1480
Query 1005 CCAGTGCGCCCACGGGGACTGCTGCGTGCGCTGCCTGCTGAAGCCGGCTGGAGCGCTGTGCCGCCAGGCCATGG 1078
|||||||||||||||||||||||||||||||||||||.|
Sbjct 1481 CCAGTGCGCCCACGGGGACTGCTGCGTGCGCTGCCTGGT----------------------------------- 1519
Query 1079 GTGACTGTGACCTCCCTGAGTTTTGCACGGGCACCTCCTCCCACTGTCCCCCAGACGTTTACCTACTGGACGGC 1152
||||| ||||
Sbjct 1520 ----------------------------------------------TCCCC----CGTT--------------- 1528
Query 1153 TCACCCTGTGCCAGGGGCAGTGGCTACTGCTGGGATGGCGCATGTCCCACGCTGGAGCAGCAGTGCCAGCAGCT 1226
||| |||||||.|
Sbjct 1529 -------------GGG-----------TGCTGGGCT-------------------------------------- 1540
Query 1227 CTGGG--GGCCTGGCTCCCACCCAGCTCCCGAGGCCTGTTTCCAGGTGGTGAACTCTGCGGGAGATGCTCATGG 1298
|||| ||||||||||| ||||||| |||||.| |..|||| ||| |||||
Sbjct 1541 -TGGGTAGGCCTGGCTCC--CCCAGCT-CCGAGCC---------------GCGCTCT-CGG--------CATGG 1586
Query 1299 AAACTGCGGCCAGGACAGCGAGGGCCACTTCCTGCCCTGTGCAGGGAGGGATGCC-CTGTGTGGGAAGCTGCAG 1371
| ||.||..||||.| ||| ||| ||
Sbjct 1587 A-----------------------CCTCTCACTGCAC-GTG-----------GCCTCT---------------- 1609
Query 1372 TGCCAGGGTGGAAAGCCCAGCCTGCTCGCACCGCACATGGTGCCAGTGGACTCTACCGTTCACCTAGATGGC-C 1444
|.|.||||.| |.|||| |||..|||||| || |
Sbjct 1610 ---------------CTCTGCCTTC-CCCACC----------------------ACCCGTCACCT-----GCGC 1640
Query 1445 AG--GAAGTGACTTGTCGGGGAGCCTTGGCACTCCCCAGTGCCCAGCTGGACCTGCTTGGC-CTGGGCCTGGTA 1515
|| |||| ||.|||||| || |||.|||
Sbjct 1641 AGCTGAAG----------------------------------CCGGCTGGA--------GCGCTGTGCC----- 1667
Query 1516 GAGCCAGGCACCCAGTGTGGACCTAGAATGGTGTGCCAGAGCAGGCGCTGCAGGAAGAATGCCTTCCAGGAGCT 1589
|||||| ||| ||.|
Sbjct 1668 --GCCAGG---CCA-TGGG------------------------------------------------------- 1680
Query 1590 TCAGCGCTGCCTGACTGCCTGCCACAGCCACGGGGTTTGCAATAGCAACCATAACTGCCACTGTGCTCCAGGCT 1663
Sbjct 1681 -------------------------------------------------------------------------- 1680
Query 1664 GGGCTCCACCCTTCTGTGACAAGCCAGGCTTTGGTGGCAGCATGGACAGTGGCCCTGTGCAGGCTGAAAACCAT 1737
Sbjct 1681 -------------------------------------------------------------------------- 1680
Query 1738 GACACCTTCCTGCTGGCCATGCTCCTCAGCGTCCTGCTGCCTCTGCTCCCAGGGGCCGGCCTGGCCTGGTGTTG 1811
Sbjct 1681 -------------------------------------------------------------------------- 1680
Query 1812 CTACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGGGACCCTGCGTGCAGTGGCCCCA 1885
Sbjct 1681 -------------------------------------------------------------------------- 1680
Query 1886 AAGATGGCCCACACAGGGACCACCCCCTGGGCGGCGTTCACCCCATGGAGTTGGGCCCCACAGCCACTGGACAG 1959
Sbjct 1681 -------------------------------------------------------------------------- 1680
Query 1960 CCCTGGCCCCTGGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGCAGTCTCGCC 2033
Sbjct 1681 -------------------------------------------------------------------------- 1680
Query 2034 TGACCCCCAAGATCAAGTCCAGATGCCAAGATCCTGCCTCTGG 2076
Sbjct 1681 ------------------------------------------- 1680
