Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12695
- Subject:
- XM_017028082.1
- Aligned Length:
- 2176
- Identities:
- 1129
- Gaps:
- 971
Alignment
Query 1 ATGGGCTGGAGGCCCCGGAGAGCTCGGGGGACCCCGTTGCTGCTGCTGCTACTACTGCTGCTGCTCTGGCCAGT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGCTGGAGGCCCCGGAGAGCTCGGGGGACCCCGTTGCTGCTGCTGCTACTACTGCTGCTGCTCTGGCCAGT 74
Query 75 GCCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGGACAAC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGGACAAC 148
Query 149 CCTGGCGCACCGTCAGCCTGGAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTGGCCCTGGAGGCTGAAGGC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCTGGCGCACCGTCAGCCTGGAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTGGCCCTGGAGGCTGAAGGC 222
Query 223 CAGGAGCTCCTGCTTGAGCTGGAGAAGAACCACAGGCTGCTGGCCCCAGGATACATAGAAACCCACTACGGCCC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAGGAGCTCCTGCTTGAGCTGGAGAAGAACCACAGGCTGCTGGCCCCAGGATACATAGAAACCCACTACGGCCC 296
Query 297 AGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACAC-------------------------------------- 332
||||||||||||||||||||||||||||||||||||
Sbjct 297 AGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACACGGTGAGATGCTTCCATGGGCTCTGGGATGCACCGCCAG 370
Query 333 -GGATCATTGCCACTACCAAGGGCGAGTAAGGGGCTTCCCCGACTCCTGGGTAGTCCTCTGCACCTGCTCTGGG 405
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGATCATTGCCACTACCAAGGGCGAGTAAGGGGCTTCCCCGACTCCTGGGTAGTCCTCTGCACCTGCTCTGGG 444
Query 406 ATGAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAGGA 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATGAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAGGA 518
Query 480 CTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCTGTGGCCACAGGGATCCTG 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCTGTGGCCACAGGGATCCTG 592
Query 554 GGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGGGGCAGGCGAGAAGCGCGCAGGACCCGG 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGGGGCAGGCGAGAAGCGCGCAGGACCCGG 666
Query 628 AAGTACCTGGAACTGTACATTGTGGCAGACCACACCCTGTTCTTGACTCGGCACCGAAACTTGAACCACACCAA 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGTACCTGGAACTGTACATTGTGGCAGACCACACCCTGTTCTTGACTCGGCACCGAAACTTGAACCACACCAA 740
Query 702 ACAGCGTCTCCTGGAAGTCGCCAACTACGTGGACCAGCTTCTCAGGACTCTGGACATTCAGGTGGCGCTGACCG 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACAGCGTCTCCTGGAAGTCGCCAACTACGTGGACCAGCTTCTCAGGACTCTGGACATTCAGGTGGCGCTGACCG 814
Query 776 GCCTGGAGGTGTGGACCGAGCGGGACCGCAGCCGCCGCCAGCTGCGCGCCTTCTTCCGCAAGGGGGGCGGCGCT 849
|||||||||||||||||||||||||||||||||| ||.|| |||| ||.||
Sbjct 815 GCCTGGAGGTGTGGACCGAGCGGGACCGCAGCCG-CGTCA----------------CGCA----GGACG----- 862
Query 850 TGCCTCTCCAATGCCCCGGACCCCGGAC--TCCCGGTGCCGCCGGCGCTCTGCGGGAACGGCTTCGTGGAAGCG 921
||||.|||.|| |.|.||.| ||| |||.| .||||| |||| |||| |.|
Sbjct 863 -------CCAACGCCACG--CTCTGGGCCTTCC---TGCAG-TGGCGC----CGGG---GGCT--------GTG 908
Query 922 GGCGAGGAGTGTGACTGCGGCCCTGGCCAGGAGTGCCGCGACCTCTGCTGCTTTGCTCACAACTGCTC----GC 991
|||| |.|||||| |||.||.| ||||| ||.|||||| ||
Sbjct 909 GGCG----------CAGCGGCC----CCACGACT-CCGCG-------------------CAGCTGCTCACGGGC 948
Query 992 TGCG----CCCGGGGGCC-CAGT-------GCGCCC-ACGGGGACTGCTGCGTGCGCTGCCTGCTGA-AGC--- 1048
.||| ||.|||.||| |||| |||||| .||.|| ||.||.||.|| ||.|| |||
Sbjct 949 CGCGCCTTCCAGGGCGCCACAGTGGGCCTGGCGCCCGTCGAGG------GCATGTGCCGC--GCCGAGAGCTCG 1014
Query 1049 --CGGCTGGAGCGCTGTG----CCGCCAGGCCATGGGTGACTGTGACCTCCCTGAGTTTTGC---ACGG--GCA 1111
.|||..||||.|.||| |||| ||.|..|||.|| |.||....|..||| || |||| |||
Sbjct 1015 GGAGGCGTGAGCACGGTGAGCCCCGC--GGGCGGGGGCGA--GGGAGAGACAGGAG----GCTCTACGGCCGCA 1080
Query 1112 -----CCTCCTCCCACTGTCCCCCAGACGTTTACCTACT-GGACGGCTCACC--CTGTGCCAGGGGCAGTGGCT 1177
|..||||||||.|.||||||| .||| ||| ||| ||||.|| |.|.||| ||| ||.
Sbjct 1081 GTGACCGCCCTCCCACGGCCCCCCAG-----GACC-ACTCGGA--GCTCCCCATCGGCGCC----GCA---GCC 1139
Query 1178 ACTGCTGGGATGGCGCATG---TC--CCACGCTGGAGCAGCAGTGCCAGCAGCTCTGGGGGCCTGGCTCCCACC 1246
|| .|||||.|||| || |||| ||| ||| ||||| ||.|
Sbjct 1140 AC------CATGGCCCATGAGATCGGCCAC-----AGC--------------CTC----GGCCT------CAGC 1178
Query 1247 CA-GCTCCCGAGGCCTGTTTCCAGGTGGTGAACTCTGCGGGAGA----------TGC-TCATGGAAACTGCGGC 1308
|| |..|||||.|.|||.|.| |||.|..||||||..|| ||| |||||| |||||||
Sbjct 1179 CACGACCCCGACGGCTGCTGC------GTGGAGGCTGCGGCCGAGTCCGGAGGCTGCGTCATGG---CTGCGGC 1243
Query 1309 CAGGACAGCGAGGGCCACTTCCTGCCCTGTGCAGGGAGGGATGCCCTGTGTGGGAAGCTGCAGTGCCAGGGTGG 1382
|| || |||.|| ||.|..||.|||..| ||||..|
Sbjct 1244 CA------------CC---------------------GGGGTG----GTTTATGAGGCTTAA-----AGGGAAG 1275
Query 1383 AAAGCCCAGCCTGCTCGCACCGCACATGGTGCCAGTGGA--CTCTACCGTTCACCTAGATGGCCAGGAAGTGAC 1454
||||.||| ||| .|||||| |||.||.||.
Sbjct 1276 -AAGCTCAG-------GCA-------------AAGTGGATTCTCAACGGTA----------------------- 1305
Query 1455 TTGTCGGGGAGCCTTGGCACTCCCCAGTGCCCAGCTGGACCTGCTTGGCCTGGGCCTGGTAGAGCCAGGCACCC 1528
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1529 AGTGTGGACCTAGAATGGTGTGCCAGAGCAGGCGCTGCAGGAAGAATGCCTTCCAGGAGCTTCAGCGCTGCCTG 1602
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1603 ACTGCCTGCCACAGCCACGGGGTTTGCAATAGCAACCATAACTGCCACTGTGCTCCAGGCTGGGCTCCACCCTT 1676
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1677 CTGTGACAAGCCAGGCTTTGGTGGCAGCATGGACAGTGGCCCTGTGCAGGCTGAAAACCATGACACCTTCCTGC 1750
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1751 TGGCCATGCTCCTCAGCGTCCTGCTGCCTCTGCTCCCAGGGGCCGGCCTGGCCTGGTGTTGCTACCGACTCCCA 1824
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1825 GGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGGGACCCTGCGTGCAGTGGCCCCAAAGATGGCCCACA 1898
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1899 CAGGGACCACCCCCTGGGCGGCGTTCACCCCATGGAGTTGGGCCCCACAGCCACTGGACAGCCCTGGCCCCTGG 1972
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1973 ACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGACCCCCAAGAT 2046
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 2047 CAAGTCCAGATGCCAAGATCCTGCCTCTGG 2076
Sbjct 1306 ------------------------------ 1305
