Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12773
- Subject:
- XR_938780.3
- Aligned Length:
- 3711
- Identities:
- 558
- Gaps:
- 3153
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGCTCAGTGAGACTTTCCTGTCACTGGCTACTACTACTCCCAACCCTCCTCAAAGCCGCCGGAGCAACCCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGTCTTTACTTTACAATCGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGGGACCAAGGAAAGTGTGGAGAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTCCAAGGATTAGGTGATCGGAGCTTGAAAAGAAAAAAAGCCAAACAAATAAACAAAACCCACCCACCCTAAC 222
Query 1 ----ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTA 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAATATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTA 296
Query 71 AACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCA 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCA 370
Query 145 ACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCA 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCA 444
Query 219 TCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCA 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCA 518
Query 293 CACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTG 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTG 592
Query 367 ATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGGCAT 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGGCAT 666
Query 441 CGTTATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGCCTTTCACATCTATTTTTTCTC 514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CGTTATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGCCTTTCACATCTATTTTTTCTC 740
Query 515 AGCTTTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAG-------GAA----------------------- 558
||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 741 AGCTTTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGATTGTCCGAAGATACATCAAGGATTGGCTTGAG 814
Query 559 -------------------------------------------------------------------------- 558
Sbjct 815 AGAAAGAAGCCTCCTTTTGGTGCTATCAGCAGCAGTGTACTCCTCATGATCATCTACACAACATTCTGTGACAC 888
Query 559 -------------------------------------------------------------------------- 558
Sbjct 889 GTTCTCTAACCCAAATATTGACCTGGATAAATTCAGCCTTGTTCTCATACTGTTCATAATATTTTCTATCCAGC 962
Query 559 -------------------------------------------------------------------------- 558
Sbjct 963 TGAGTTTTATGCTTTTAACTTTCATCTTTTCAACAAGGAATAATTCGGGTTTCACACCAGCAGACACAGTGGCT 1036
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1037 ATCATTTTCTGTTCTACACACAAATCCCTTACATTGGGAATTCCGATGCTGAAGATCGTGTTTGCAGGCCATGA 1110
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1111 GCATCTCTCTTTAATATCTGTACCCTTGCTCATCTACCACCCAGCTCAGATCCTTCTGGGAAGTGTGTTGGTGC 1184
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1185 CAACAATCAAGTCTTGGATGGTATCAAGGCAGAAGAAACTACTCCAAACCAGGGGGCCACTGGCTAACTTGAAT 1258
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1259 AATCCAGAAGGCTTGGAATATCTATCCATCAAATTTGGGCATTAAAATAAATACCAAGAGTCCATCCTCCAGGG 1332
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1333 AGTGAAGCTGACAAGGCCGACAGTATAACAAAGGAGGTGGACTTTCTGTAGCAATGTATATATGTACAGGATTG 1406
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1407 TACATACTAGCAATTCTGAAGACTTGTACTTGTGAATGTTGCCTCAATGCATATTTTATTTTTTTACACAAAAA 1480
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1481 TATGAGATCCTGTTTAAGTGCCTTAAAATGTATTTGACAAGAGCGTTATTTCCAAAATATGCTTTGTTGATTAC 1554
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1555 TGCCAGGGGTGGTACAATATTTGGGGGTTAATTTTGCTTTCCTAATGCAGGAATCAGTCATGGTAAGTGACAAA 1628
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1629 AAGCAAACATGCTTTCCCTGCAGCACCTTTGTGCAATACAACCCTATAGTAGTTACTGTAATGTTTGAAATGAG 1702
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1703 GTCACACCATCAGGAAAATGCCCTTCTGATGACAGTGAAAATTTCCAAAGTCTTATTCATGCATACTTTGATTT 1776
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1777 ACTGTGTGATTCTTTTTTTCTACGACTGTGACATGCCTCTTCCTTATCAACTCAGCAGGGGTCATAGATCGAAT 1850
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1851 AGATGCTGAAAAGCGTAAGATATATGCATTCCTTGACATCATTTTTAAAGACATTCCTTCAAATAGTTTCCACA 1924
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1925 CAGAAATTCCTCACTCCCATTATGAGAGATTGTGGTTATATGTCTTAAATTTATTATAAGCTGCTTCAAAGAAA 1998
Query 559 -------------------------------------------------------------------------- 558
Sbjct 1999 GGGTCTGAATGTTTGAATTATGAGTGAAATCATGTGAAATTTTGAGTTAAACTCTGTGATTTGATTTTCAGGGT 2072
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2073 CTTTAAAATATATCTTAATATCTTCTTCCTCTTTATTCAATAATTTCTGTCTTGCACTTACACACTCATAACAG 2146
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2147 CCAAATATGAGGCACAAAAATGTTACAATCAGTTTGAAAGCAGCATCAATTAATGGTAGATTCTATTCACATTC 2220
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2221 CACAACCCAGACCAAATTTTTTTCCTATTACGCAGATGTGCTGAGCACTTTCCAGATTGCCCCTGTTGGCCAAA 2294
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2295 AGCAGCCTGTTACATCCTGGAATTAAGCACACTTAAGATGAAAAGAACATGCAAAACCATTTAATAACCAAAAT 2368
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2369 ATCAAGTAAAATTAGTTCCCAACGGGGCAGCAGCTTTCAAATGAGTGTCCAATATTTGCTTCTGCTATAGCTGC 2442
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2443 AAGAACTGTAACTGGACCCAAGTAGAGAATGAAGCCACGTATAGAACTACGAGAACACTTTTCTGTGTTTCCCC 2516
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2517 CATGCCGTCCTGTCACATCCTCTTACACGTCCTCTCTTGATTTGATAGACAATATTGGCATCCTGGGTCTCACT 2590
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2591 GAGGCCGTGCTATGTCCTCAGCAGCTGTTTTTGTTGTTTCGTTATTATGCCCACAACAAAAAATCATTCCTTAG 2664
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2665 AAACTCACCAAGTTTATCTACTGTGTAAATTTATATTATTGTTACTACCAGGTCTCATCTTTTGTCAATGTCAT 2738
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2739 TGAATAAATTTCATAAGAGTTATTCTCAGTGTGAATTTTAAGGCTAATGCCAGATCCTGCAAAAATCTATGCTA 2812
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2813 ACCAGGCTGTAGTACACACTGTTATAAAGAATTTTACTTGTGTCTAAAACTACAGTAATTTTGCTTAGGTAATT 2886
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2887 GTGCTTACCTATGGAGCACAGGAAGGCTCTTAGGTTTTGTTCCTACAAGTTTCTTTGAATTTTGGAGTAAATGG 2960
Query 559 -------------------------------------------------------------------------- 558
Sbjct 2961 AAGTGTCTGTCTGTCTGTCATCTATCTGCCCTATCATAAAAATCTTTCTCCCTAACATTAAAATACTGATCCCC 3034
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3035 GCCCCCAACTTATCTACCTCTATTGTCTAACACCTATAGTAGGTGTGATCATGGGATAAAATTCAACTGAAAAT 3108
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3109 GCTATGATAACATTTTATCGTTTGCTTTAAAAATGTGCTTTGTTTTCAAATAATCTTTACATAGTGAACTTTGG 3182
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3183 TGGCGTTAGTGATATGTTTATGCCTATTTCTTTTTTTTACACAAATTCCTTGGCATATTTTTTCATAAAGAACA 3256
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3257 AAAAATAAAATCAAAATTTATTTTTAATTCATGCTTATTGGGATTTAATTATTCAGAGCTTAAAATATTTTGTT 3330
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3331 ATGTTTATACACTGTAAAGCTATCTGTTTTATGCATTTGTTTTGTCTAAATGTATTTATGAAAGAAATACATTA 3404
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3405 GATTATATTTATGTTTACTCATTTTTCCACCTGGATTTTTTTTAATGGTTGTTACAAAATTAGATTTTTTAATG 3478
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3479 GGTAATAATGTTGGTATTTTCATGTTTTTTCTTAGTATTAAAATTTTTGTGGGTTTTTTAAAATTTTTCCCTAT 3552
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3553 TCTGTTAAAAATTAACACACCTCTAGCTAATGTTCAGTGTTTGTGCTAAATACCAAATTTTTTCAAAAGGATTG 3626
Query 559 -------------------------------------------------------------------------- 558
Sbjct 3627 GTTAAGTCATAAAGTGGATTATTTATGATGACTGGAAGATGAAAATAATTATATGATTAAACAAAGAATGTTTC 3700
Query 559 ----------- 558
Sbjct 3701 AGAAATCACAA 3711
