Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NM_001288726.2
- Aligned Length:
- 1616
- Identities:
- 183
- Gaps:
- 1408
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCAGTGGCAACCTGCGGTAGTGTTGCCGCGAGTACTGGGTCTGCAGTGGCGACAGCCAGCAAGAGCAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGTCACCAGTTTCCAGAGGAGGGGTCCTAGAGCCAGCGTGACCAACGACAGCGGCCCTCGACTGGTGTCCATTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGGCACGCGACCGTCGGTGCGGAATGGACAGCTGCTGGTATCAACCGGGCTCCCAGCCCTAGACCAGCTCTTA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGTGGAGGTTTAGCCGTTGGAACAGTTCTTCTAATTGAGGAGGATAAATATAATATTTACTCACCTTTGCTCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAAGTATTTCCTGGCAGAAGGAATTGTCAATGGGCATACTTTGTTGGTTGCATCTGCTAAAGAGGATCCTGCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACATTTTACAGGAACTTCCAGCACCATTACTTGATGATAAATGTAAAAAGGAATTTGATGAAGATGTATACAAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATAAAACACCAGAATCTAATATTAAGATGAAAATAGCTTGGCGTTACCAGTTATTACCCAAGATGGAGATTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCAGTATCATCTTCAAGATTTGGTCACTATTATGATGCATCAAAAAGAATGCCACAAGAACTAATTGAGGCTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAAATTGGCATGGATTTTTTCTTCCAGAGAAAATATCTTCAACTCTCAAAGTAGAACCCTGTTCTTTGACCCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCTACACAAAGCTGCTTCAGTTTATCCAGAACATCATTTATGAGGAAGGATTTGATGGATCCAATCCTCAGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAACAGAGAAACATTTTAAGAATAGGAATTCAGAATCTTGGCTCACCTTTATGGGGAGACGATATTTGCTGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAGAAAATGGTGGCAACAGTCACAGCCTTACCAAGTTCCTCTATGTTCTCCGTGGTCTTCTGAGAACCTCTCTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCAGCCTGCATCATCACAATGCCAACACATCTGATCCAGAATAAAGCCATTATTGCCCGTGTCACAACCTTGTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGATGTAGTAGTTGGTCTGGAATCATTTATTGGTTCTGAGAGAGAAACTAACCCATTGTATAAGGATTATCATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GATTGATTCATATACGGCAGATTCCTCGGCTTAATAACTTGATCTGTGATGAATCAGATGTCAAAGACTTAGCT 1110
Query 1 -----------ATGGAGTCTCATTC-----TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGC 58
|.|||..|| |||| || ||.||||||||.|||||||.|||||||||||||.||
Sbjct 1111 TTTAAATTAAAAAGGAAGCT-ATTCACCATTG------AGGCTGGAGTGCAGTGGCACGATCTCGGCTCACGGC 1177
Query 59 AACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAA 132
|||||| |||||..|.|.||||||.|||||||.|||||.||||||..|||||||||||||||||||.|.|.|.|
Sbjct 1178 AACCTC-GCCTCCTGGGTTCAAGCAATTCTCCCGCCTCAGCCTCCCTAGTAGCTGGGATTACAGGCGCCCACCA 1250
Query 133 CCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAAC 206
|||..|||.||||| ||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 1251 CCACACCCAGCTAA---TTTTTGTATTTTTAGTAGAGATGGGGTTCCACCATGTTGGCCAGGCTGGTCTCGAAC 1321
Query 207 TCCTGACCTCAAG------------------------------------------------------------- 219
|||||||||||.|
Sbjct 1322 TCCTGACCTCAGGTGATTCATCCGCCTCAGCCTCCCAAAGTGCTGGAATTACAGGCATGAGCTACCGCGCCCGG 1395
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1396 CCTAGGGCTTTGTATTTCAAAGAGAACAAGTCTAAAGTGGGTGCAAGACAACTACTTGAGACAAGAGAGGAACA 1469
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1470 TTTATCCTCCAGGCTTCTCATACTTACTCAAGCAGAAAGACTCTGCATGGGGAGAAGGTTCTTTACAGCATTCC 1543
Query 220 -------------------------------------------------------------- 219
Sbjct 1544 ACATTTTTAATGAGCTTCCTTGCAAAGGCGACTGCATTTGCCTCCAGACTTGTCAGACACAG 1605
