Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_026697.2
- Aligned Length:
- 3780
- Identities:
- 188
- Gaps:
- 3563
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGTGGTGCGAAGCCACCTCCCCCGCCGAATCGCGCATCTGCGCAGTTGCTGTTATTGTGACTTGTCGGGCCACG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCCCGGATGTTGTGGCTGCCGCGGGGAGATGGCTGAGGCCGAAGGGGTTCCCACGACCCCAGGCCCGGCTTCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGTCGACTTTCAGGGGCCGCCGAGATGTGTCAGGCTCCTGGGAGCGGGACCAGCAGGTTGAGGCGGCGCAGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCCCTGGTGGAGGTGCTGGGGCCTTACGAGCCTCTGCTGAGTCGGGTGCAGGCAGCCCTGGTGTGGGAGCGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGCTAGGAGCGCTCTGTGGTGCCTGGGGCTGAACGCGGCTTTCTGGTTTTTTGCCCTGACATCTCTTCGTCTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGTTTTTACTTGCATTTGGCTTGATGATCATTGTGTGTATTGATCAATGGAAGAACAAAATCTGGCCTGAAAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAAGCTGGGGCTTTGTGCACCCTCGGTTGCTCAGCGTGCCCGAGCTCTGCCACCATGTAGCTGAAGTCTGGGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAGTGGGACCATTTTCATAAGGAATGTTTTGCTTTTCAAAAAGCAAAACCCAGGCAAGTTCTGCTTGCTGAGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGGGATACTGACCTTTTTGGCTGTCTTGGGCCGCTACGTCCCTGGGCTTCTGCTGTCCTACTTGATGCTTGTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACTGTCATGATGTGGCCCCTTGCTGTGTACCACCGACTGTGGGATCGAGCATATGTGCGGCTGAAGCCAGCTCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCAGCGGCTAGACTTCAGTGTCCGTGGCTACATGATGTCCAAGCAGAGAGAGAGACAATTACGCCGCAGAGCTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCACCCAGAACGAGCCATGGACAACCACAGTGACAGCGAAGAGGAGCTTGCTGCCTTCTGTCCTCAGCTGGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GATTCTACTGTTGCCAGGGAATTGGCCATCACAGACTCTGAGCACTCAGACGCTGAAGTCTCCTGTACAGACAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGCACATTCAATCTTTCAAGGGGCCAAACACCTCTAACGGAAGGCTCTGAAGACCTAGATGGTCACAGTGATC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGAGGAATCCTTTGCCAGAGACCTTCCAGACTTCCCTTCCATTAATATGGATCCTGCTGGCCTGGATGATGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACGACACTAGCATTGGCATGCCCAGCTTGATGTACCGTTCTCCGCCAGGGGCTGAGGAGCCCCAGGCCCCACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCCAGCCGGGACGAGGCTGCGCTGCCGGAGCTCCTGCTTGGTGCTCTTCCTGTAGGATCCAACCTCACCAGCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACCTTGCCAGCCTGGTCTCCCAGGGTATGATTCAGCTGGCCTTGTCAGGGGCCTCCCAACCAGGCCCTTCTGGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GCACCTGCCCAGAGAGCAACGAGAGGCTTCCTCCGGTCCCCCAGTTCAGACCTGGACACTGATGCTGAGGGGGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGACTTTGAACTTCTGGACCAGTCGGAGCTGAGTCAGCTGGACCCTGCCAGTTCTAGGAGCCACTGAGGCAGAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACTCCTTTTGGGAGTCACTGTGGTTTAGGTTTTTTTCTCCCCATCCCACTTAAGGTGATGGGGCAAGGGAAGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTCAGCTCCCCTCCCCTGAATTATATTTGTATGCTGGGTGGCCTGGCTGATGCTCAGAGGCCTCCTTAGAGAGG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACACTCACTCCCCTCCCACCAGCTGGATGCCCATTTCTGAGCTCAGTCACTGAAGTGAGAGTGTGCTCCCCCAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGGAGGCTTCTCTCCATCAGGATGGTACTTTGGGGGAACAAAATAGTCAGGGATATTGGTTCCCCTTTGAGGAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTGCTGCTGTTTGCTTTTAGGTATGAGTGCTCAGGGGCCCTCACTGAAAGAGCCCATGCCTGCCTTCCTCCTTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CATCGCCTCTCTAGAGCCCCCAAAGTCAGGCAGCAGCTGGAGTAGTTACATTGTCATCATCTTTTTTTTTGAGA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAGTTTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTTGGCTTTCTGCAACGTCTGCCTTCCAGGTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAAGAGGTTCTCCTGCCTCAGCCTCCTTAGTAGTGGGATTACAGGTGCCCGCTACTATGCCCGGCTAATTTTTC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTTTGGTATTTTTAGTAGAAATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAGTGAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTGACTGCCTTGGCCTCCCAGAGTGCTGGGATTAGTCGTCATCTTTTGTTAAACCAGGATTTGATTTTTTTCTT 2220
Query 1 ------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGA 44
|..|||||||..|||||.||||||.||||||||.|||||||..|
Sbjct 2221 TTCTTTTCTTTTCTTTTTTTTTTTTTTGAGACAGAGTCTCTCTCTGTTGCCCAGGCTGGAGTGCAGTGGCACAA 2294
Query 45 TCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATT 118
|||||||||||||||.||||.||||..|| |||||||||||||||||.||||.||||||..||||||||.||||
Sbjct 2295 TCTCGGCTCACTGCAGCCTCCGCCTGCCG-GGTCAAGCGATTCTCCTACCTCAGCCTCCTCAGTAGCTGAGATT 2367
Query 119 ACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCA 192
|||||||..|.|.||||||||||||||| |||||||||.|||||||||||||||||||||||||.||.||||||
Sbjct 2368 ACAGGCATGCACCACCATGCCCGGCTAA-TTTTTTTGTGTTTTTAGTAGAGATGGGGTTTCACCGTGCTGGCCA 2440
Query 193 GGCTGGTCTCGAACTCCTGACCTCAAG----------------------------------------------- 219
|||||||||.|||||||||||..|||.
Sbjct 2441 GGCTGGTCTAGAACTCCTGACTGCAAATGATCAGCCCGCCTCAGCCACCCAAAGTGTTGGGATTACAGGTGTGA 2514
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2515 GCCACTGTGCCCAGCGTGATTTTTTTTTTTTTTTAAAGCAAACTTGTCCTTTGGTTTTGCAGAACAGGCCTGCT 2588
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2589 CCCTCTCATCTAGCCCATCATTTCTTGGGGCCTGAACCCCAGTGGTCCAAAGTATTGCTTGTGAAATTTAAAAA 2662
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2663 ATGTGAATATGATGTGGGGATGGGCCTCTTCTACATTACCTTGGCCCAGGGGGATCAGCTGGCTGGGAGGATTA 2736
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2737 GTGAGCACCTCTGTATTTTGAGGTCTGAGTCTTCTGGAGCTGTGTAGTTAATCTTCGGTTTCTGATAACCCCTG 2810
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2811 GGTCCATCTGGCCATCAGCCTCAGCAGTGAGCAAAGCAATACCATACTCATTTCTATGTTCCTGTTCCTTCCTC 2884
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2885 TGCTCCTCCTTTGGAGAAGCAATAATTCATGGGGGATGATACAGTAGCACTTTACAAATGGCTCCATGTCATTC 2958
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2959 ATCCCAGGGGCCATAATCTCTTGCACCACCTATTCTTACTTCCTGTTCAGCTCCTTTACAGCTTTTATTTTCAA 3032
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3033 CTGCTTCCCAACTTGGTGGGGCCTCCTTTAAGGATGAGCCAATAGTAAGAATGTGGCTGTAATCAGCAGAGACC 3106
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3107 CCTCTGAGGGGTATCTGTTCTGCAGCCCCTAGTGAAATCATGTGATGTGAGACAGAAACCTAAACATGGTACTT 3180
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3181 GATTCTAAACCTGTGCCAGTCTATAGCCTCTGCCTCCCCAAGCAGAGCTCAAGCCAAACGCTTCTGTCCTCTTT 3254
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3255 CCTTCTGCATTAACCCTTTGCTGATCCTCAGGGGCCACTCCCCCAACACCCCTGTACTTGGGTGAGGGATGTTG 3328
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3329 GACAGAGCCTGTTTTCATGTACTGCAGGTGGGGGTGTGCTGACATGTTTGCTCTTGGTTGATGGAGAAGGTACA 3402
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3403 GAGGCCAGGGAGTGAAAATGGTTGACAGAAGAGGGAAGAGTTAGGTGTCTCATAGTCACTCATAGTGGGGTGGT 3476
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3477 CAGGGGTAATGGCATCTCCCCACTTTAGGCTTCTCAAACAGACTTTTGACACCTCTCAAGTTCAGAGCTCTGAT 3550
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3551 GTGGAAAGACAGGAGGTGTGGGGAAGGAGGGGGATTTCGTGTGTTTGCATGAGTGTGCGCTTCAGGCCTTGGGA 3624
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3625 GTTGGCAAGAGGGAGGGAAGGAAGGAGAGCAAAATCTTCGGAAGGTGTTTCTTGTACCTGAGGGATCCTGCCCT 3698
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3699 GAATCTCCATAGTCTCCACTGTGAACTGAGGAGGGGAGGGGTGTGCTGGGGAATAAATCTTGTATGAGAACAAT 3772
Query 220 ------ 219
Sbjct 3773 CTTTAA 3778
