Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_027140.2
- Aligned Length:
- 3808
- Identities:
- 188
- Gaps:
- 3592
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCCTGGACACATAAATCAGCACGCGGCCGGAGAACCCCGCAATCTCTGCGCCCACAAAATACACCGACGATGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGATCTACTTTAAGGGCTGAAACCCACGGGCCTGAGAGACTATAAGAGCGTTCCCTACCGCCATGGAACAACG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGACAGAACGCCCCGGCCGCTTCGGGGGCCCGGAAAAGGCACGGCCCAGGACCCAGGGAGGCGCGGGGAGCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCCTGGGCCCCGGGTCCCCAAGACCCTTGTGCTCGTTGTCGCCGCGGTCCTGCTGTTGGACACCATATCTCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAGACGGTAGAGATTGCATCTCCTGCAAATATGGACAGGACTATAGCACTCACTGGAATGACCTCCTTTTCTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTGCGCTGCACCAGGTGTGATTCAGGTGAAGTGGAGCTAAGTCCCTGCACCACGACCAGAAACACAGTGTGTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGCGAAGAAGGCACCTTCCGGGAAGAAGATTCTCCTGAGATGTGCCGGAAGTGCCGCACAGGGTGTCCCAGAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGATGGTCAAGGTCGGTGATTGTACACCCTGGAGTGACATCGAATGTGTCCACAAAGAATCAGGCATCATCATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGAGTCACAGTTGCAGCCGTAGTCTTGATTGTGGCTGTGTTTGTTTGCAAGTCTTTACTGTGGAAGAAAGTCCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCCTTACCTGAAAGGCATCTGCTCAGGTGGTGGTGGGGACCCTGAGCGTGTGGACAGAAGCTCACAACGACCTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGGCTGAGGACAATGTCCTCAATGAGATCGTGAGTATCTTGCAGCCCACCCAGGTCCCTGAGCAGGAAATGGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTCCAGGAGCCAGCAGAGCCAACAGGTGTCAACATGTTGTCCCCCGGGGAGTCAGAGCATCTGCTGGAACCGGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGAAGCTGAAAGGTCTCAGAGGAGGAGGCTGCTGGTTCCAGCAAATGAAGGTGATCCCACTGAGACTCTGAGAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGTGCTTCGATGACTTTGCAGACTTGGTGCCCTTTGACTCCTGGGAGCCGCTCATGAGGAAGTTGGGCCTCATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GACAATGAGATAAAGGTGGCTAAAGCTGAGGCAGCGGGCCACAGGGACACCTTGTACACGATGCTGATAAAGTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGTCAACAAAACCGGGCGAGATGCCTCTGTCCACACCCTGCTGGATGCCTTGGAGACGCTGGGAGAGAGACTTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCAAGCAGAAGATTGAGGACCACTTGTTGAGCTCTGGAAAGTTCATGTATCTAGAAGGTAATGCAGACTCTGCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGTCCTAAGTGTGATTCTCTTCAGGAAGTCAGACCTTCCCTGGTTTACCTTTTTTCTGGAAAAAGCCCAACTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GACTCCAGTCAGTAGGAAAGTGCCACAATTGTCACATGACCGGTACTGGAAGAAACTCTCCCATCCAACATCAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCAGTGGATGGAACATCCTGTAACTTTTCACTGCACTTGGCATTATTTTTATAAGCTGAATGTGATAATAAGGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACTATGGAAATGTCTGGATCATTCCGTTTGTGCGTACTTTGAGATTTGGTTTGGGATGTCATTGTTTTCACAG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CACTTTTTTATCCTAATGTAAATGCTTTATTTATTTATTTGGGCTACATTGTAAGATCCATCTACACAGTCGTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTCCGACTTCACTTGATACTATATGATATGAACCTTTTTTGGGTGGGGGGTGCGGGGCAGTTCACTCTGTCTCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAGGCTGGAGTGCAATGGTGCAATCTTGGCTCACTATAGCCTTGACCTCTCAGGCTCAAGCGATTCTCCCACCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAGCCATCCAAATAGCTGGGACCACAGGTGTGCACCACCACGCCCGGCTAATTTTTTGTATTTTGTCTAGATAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGGGGCTCTCTATGTTGCTCAGGGTGGTCTCGAATTCCTGGACTCAAGCAGTCTGCCCACCTCAGACTCCCAAA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCGGTGGAATTAGAGGCGTGAGCCCCCATGCTTGGCCTTACCTTTCTACTTTTATAATTCTGTATGTTATTATT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTATGAACATGAAGAAACTTTAGTAAATGTACTTGTTTACATAGTTATGTGAATAGATTAGATAAACATAAAAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAGGAGACATACAATGGGGGAAGAAGAAGAAGTCCCCTGTAAGATGTCACTGTCTGGGTTCCAGCCCTCCCTCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GATGTACTTTGGCTTCAATGATTGGCAACTTCTACAGGGGCCAGTCTTTTGAACTGGACAACCTTACAAGTATA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGAGTATTATTTATAGGTAGTTGTTTACATATGAGTCGGGACCAAAGAGAACTGGATCCACGTGAAGTCCTGTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGTGGCTGGTCCCTACCTGGGCAGTCTCATTTGCACCCATAGCCCCCATCTATGGACAGGCTGGGACAGAGGCA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GATGGGTTAGATCACACATAACAATAGGGTCTATGTCATATCCCAAGTGAACTTGAGCCCTGTTTGGGCTCAGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGATAGAAGACAAAATCTGTCTCCCACGTCTGCCATGGCATCAAGGGGGAAGAGTAGATGGTGCTTGAGAATGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGTGAAATGGTTGCCATCTCAGGAGTAGATGGCCCGGCTCACTTCTGGTTATCTGTCACCCTGAGCCCATGAGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGCCTTTTAGGGTACAGATTGCCTACTTGAGGACCTTGGCCGCTCTGTAAGCATCTGACTCATCTCAGAAATGT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CAATTCTTAAACACTGTGGCAACAGGACCTAGAATGGCTGACGCATTAAGGTTTTCTTCTTGTGTCCTGTTCTA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTATTGTTTTAAGACCTCAGTAACCATTTCAGCCTCTTTCCAGCAAACCCTTCTCCATAGTATTTCAGTCATGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AAGGATCATTTATGCAGGTAGTCATTCCAGGAGTTTTTGGTCTTTTCTGTCTCAAGGCATTGTGTGTTTTGTTC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CGGGACTGGTTTGGGTGGGACAAAGTTAGAATTGCCTGAAGATCACACATTCAGACTGTTGTGTCTGTGGAGTT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TTAGGAGTGGGGGGTGACCTTTCTGGTCTTTGCACTTCCATCCTCTCCCACTTCCATCTGGCATCCCACGCGTT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GTCCCCTGCACTTCTGGAAGGCACAGGGTGCTGCTGCCTCCTGGTCTTTGCCTTTGCTGGGCCTTCTGTGCAGG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ACGCTCAGCCTCAGGGCTCAGAAGGTGCCAGTCCGGTCCCAGGTCCCTTGTCCCTTCCACAGAGGCCTTCCTAG 3182
Query 1 -------------------------------------------------------------------ATGGAGT 7
|..||.|
Sbjct 3183 AAGATGCATCTAGAGTGTCAGCCTTATCAGTGTTTAAGATTTTTCTTTTATTTTTAATTTTTTTGAGACAGAAT 3256
Query 8 CTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAG 81
||||.|||.||||||||.||||||||.|..||.|.|||||.||||||.|||||||||.|||||..|.|.|||||
Sbjct 3257 CTCACTCTCTCGCCCAGGCTGGAGTGCAACGGTACGATCTTGGCTCAGTGCAACCTCCGCCTCCTGGGTTCAAG 3330
Query 82 CGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTG 155
||||||||.||||||.|||||||||||||||||||||.|||||||.|||.||||.|||.|||||| ||||||
Sbjct 3331 CGATTCTCGTGCCTCAGCCTCCGGAGTAGCTGGGATTGCAGGCACCCGCCACCACGCCTGGCTAA---TTTTTG 3401
Query 156 TATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------- 219
|||||||||||||||.||||||||||||||||||.|||||||||||||||||||||||||||.|
Sbjct 3402 TATTTTTAGTAGAGACGGGGTTTCACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCT 3475
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3476 TGGCCTCCGAAAGTGCTGGGATTACAGGCGTGAGCCACCAGCCAGGCCAAGCTATTCTTTTAAAGTAAGCTTCC 3549
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3550 TGACGACATGAAATAATTGGGGGTTTTGTTGTTTAGTTACATTAGGCTTTGCTATATCCCCAGGCCAAATAGCA 3623
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3624 TGTGACACAGGACAGCCATAGTATAGTGTGTCACTCGTGGTTGGTGTCCTTTCATGCTTCTGCCCTGTCAAAGG 3697
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3698 TCCCTATTTGAAATGTGTTATAATACAAACAAGGAAGCACATTGTGTACAAAATACTTATGTATTTATGAATCC 3771
Query 220 ---------------------------------- 219
Sbjct 3772 ATGACCAAATTAAATATGAAACCTTATATAAAAA 3805
