Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
NR_027514.3
Aligned Length:
3424
Identities:
187
Gaps:
3211

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CTTGACGCTGTGGCCCGGAAGTGGAGCGGCTGTCGCAGTGCGGCTCCGGCAGTGGCAGCGGAGGCCTGTGTTTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGGCCTTCGGCAAGCGACTGAGATGGCGAGCGCAACTGCACCTGCAGCCGCAGTCCCCACCCTGGCTTCGCCTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGGAGCAGCTCCGGCACTTGGCGGAGGAGCTGCGGTTGCTCCTGCCTCGAGTGCGGGTCGGCGAAGCCCAGGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACCACCGAGGAGTTTAATCGAGAGATGTTCTGGAGAAGACTCAATGAGGCAGCTGTGACTGTGTCAAGGGAAGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CACGACTCTGACCATAGTCTTCTCTCAGCTTCCACTGCCGTCTCCACAGGAAACCCAGAAGTTCTGTGAACAAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCCATGCTGCCATCAAGGCATTTATTGCAGTGTACTATTTGCTTCCAAAGGATCAGGCCCTGAGAACAATGACC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TTATTTCCTACAACAGTGTCTGGGTTGCGTGCCAGCAGATGCCTCAGATACCAAGAGATAACAAAGCTGCAGCT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTTTTGATGCTGACCAAGAATGTGGATTTTGTGAAGGATGCACATGAAGAAATGGAGCAGGCTGTGGAAGAATG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGACCCTTACTCTGGCCTCTTGAATGATACTGAGGAGAACAACTCTGACAACCACAATCATGAGGATGATGTGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGGGGTTTCCCAGCAATCAGGACTTGTATTGGTCAGAGGACGATCAAGAGCTCATAATCCCATGCCTTGCGCTG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GTGAGAGCATCCAAAGCCTGCCTGAAGAAAATTCGGATGTTAGTGGCAGAGAATGGGAAGAAGGATCAGGTGGC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  ACAGCTGGATGACATTGTGGATATTTCTGATGAAATCAGCCCTAGTGTGGATGATTTGGCTCTGAGCATATATC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CACCTATGTGTCACCTGACCGTGCGAATCAATTCTGCGAAACTTGTATCTGTTTTAAAGAAGGCACTTGAAATT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ACAAAAGCAAGTCATGTGACCCCTCAGCCAGAAGATAGTTGGATCCCTTTACTTATTAATGCCATTGATCATTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CATGAATAGAATCAAGGAGCTCACTCAGAGTGAACTTGAATTATGACTTTTCAGGCTCATTTGTACTCTCTTCC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCTCTCATCGTCATGGTCAGGCTCTGATACCTGCTTTTAAAATGGAGCTAGAATGCTTGCTGGATTGAAAGGGA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTGCCTATCTATATTTAGCAAGAGACACTATTACCAAAGATTGTTGGTTAGGCCAGATTGACACCTATTTATAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACCATATGCGTATATTTTTCTGTGCTATATATGAAAAATAATTGCATGATTTCTCATTCCTGAGTCATTTCTCA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GAGATTCCTAGGAAAGCTGCCTTATTCTCTTTTTGCAGTAAAGTATGTTGTTTTCATTGTAAAGATGTTGATGG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCTCAATAAAATGCTAACTTGCCAGTGATTAAATGAGTGCCCTTCCAAAGTTTCTTTTTACCAGAAATACAGTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GATTGAGACTAGAACATTGCTTTCATTTGGGTTTGTAGGTTTAAAAATCTGATTCTAATCAGAAGTATATTTAG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AACAAAACACTTTATTTATAAAAGATGACTCCAAAATTCATCTTAGTATTTCACCATGTTATATATTATTATCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCAAGTCCTTCTGAATATTATCACAGATTACTCCATGTCTCTAAAATATATTGGCATTGAGCTCATTTGTTAGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TTTGCCCACCTTATTGAACAGATTTATTTTCCTTATACATACTTGTGTTGTCCTTGGTTACGTGTGTCCCCAAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGTAAATACCAAATTTTTATAAATCAAAAATTTTTTAGTGTGTAAGAGATTTTATGTAATTTTAAGGGCCTTTT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CAGTTCATCCTTTTGCAAAACCATCACCACTTAATTATACTTTTGCATCAGTCTAGAAGACTGCATATTGGAAA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GCAGTGTAAATCTATAATGATGTATATTCTGGTGAGCTGAATAGGGCATTATGCATGTCCTACAGGTCTCCGCC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ACCTCTCATGCCCATCATCTTCCTTTTGTAGGTGTAATTCATAACATATGCCTTTCTGCTGTCTTTAGGTATAA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TCAGCAACAGCAGTCATTCTTTGAGTGACTAATGTATACTTGGGGTTGGGGTTGAAATTCCTTAAGCCAAATGA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GTTTTAGCTTACTGTTTTGAAGTGCCATTTTGTATTGTTAACAAGTGTCATGAAGGGAAGGAACTAAAATCAAA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CTGACAGAGTGTCAAGGCAACAAAATAACATAAACAAAATAATAACATTGTACAACAGTCTAGTTCTTTTATCC  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TTTCATATAGAGCCTATTTTTTATATACTTTTATATTTCTCTACTGGACCAAATTCATGTTATTAACATCAGAC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TTTAATTGTGGGATACTTAATGAATATAGAACTCTAATATAAAGACTTACCTCTAGCTGAATTATTCTCTCAGG  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TCCTGTATTGTATAACTTCGTTCAGTCATGTTTGGATCTTTAAGGATAATGATCAGGGAAAGCACTGATCAATG  2516

Query    1  -------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATG  43
                                           |||||||||...||||||.||||..||||||||.|||||||..
Sbjct 2517  TAATTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCCCCCAAGCTGGAGTGCAGTGGCACA  2590

Query   44  ATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG---TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGG  114
            .||||||||||||||||||||.||||| |.|||   ||||||.||||||..||.||.|||||...|||||||||
Sbjct 2591  CTCTCGGCTCACTGCAACCTCCGCCTC-CCAGGTTCTCAAGCAATTCTCTGGCTTCAGCCTCTCAAGTAGCTGG  2663

Query  115  GATTACAG--GCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGT  186
            ||.|||||  |||||  |.||||||.||.|||||   |||||||||||||||||||||||||||||||||||||
Sbjct 2664  GACTACAGATGCACA--CCACCATGTCCAGCTAA---TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGT  2732

Query  187  TGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-----------------------------------------  219
            ||||||||||||||||.||||||||||||||.|                                         
Sbjct 2733  TGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCCACGTCAGCCTCCCAAAGTGCTGGGATTACAG  2806

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2807  ATGTGAGCCACCGAGCCCAGCTTGATCAATGTAATTTTAAGATTACCTAAAAATTCCATTTTGGGATAATATCC  2880

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2881  CACTTCATCAGAAATATTAGAATGATTTAAGTGTTAGGTCCTTTCCCTTATCTGTAAGTTAATGAATGTATTAA  2954

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2955  TGAGCAGTAAAATGGTTGCAAAAAACCTGAACCTGAACAATCTGAATGTACTCCTTAAAGGTATCTGAGCACCT  3028

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3029  TTTCAACCTGAATGACTACTCATTTATCTGATAAAGTGATGTAGTTTGGATATTCAACCCTGCAAACCTCATGC  3102

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3103  TGAAATTGGATTCCCAGTGTTGGAGGTGGGGCCTAATGGGAGGTGTTTGGATCCCTCATGAATGGCTTCGTTCC  3176

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3177  ATTGGTGGGGTAATGAGTAAGTTCTCGCTCTATATGTCCCTCCCCCACCCCAGAGCTGGCTGTTAAAACGAGGC  3250

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3251  TGGCACCTGGCACTTACCCCTACCCCTCAACCCATTCTTGCCCTGTGATCTCTGCTCACGTTGCCTCCCTTCAT  3324

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3325  CTTCCTGCATAAGTGGAAGCAGCCTGAAGCCCTCACTGTTTCTTGTACAGCCTGCAGAGCCGTGAGCCAAATAA  3398

Query  220  --------------------  219
                                
Sbjct 3399  AGCTCTTTTCTTTTAAACTA  3418

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