Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
NR_033855.1
Aligned Length:
3722
Identities:
190
Gaps:
3506

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACTGCGCCCGAGAGGCAGCGCTCAGACAGCGGGGAGGAGGCGGCCGCGGAGCCCCCGGAGATGGAGGGTGAAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCTGCTTTCAAAGTATCCCACGTCGTTCAGCAAAGATTCGTCATTTAGAATTCAGACCTGCCAAGACCACGGAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCTTTGTCTCAGCTCGGATATCTTCATTTCTCCTTCTTACAGTTTCCTTGTTTCCGAGGAAAAACACAAGATCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGACAACTGCAATCACCTGGTAACCAATCATGAATCTGGTATGGACCACTTTCACCCTGCACCCTGTCAGGCAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TTTCCATCTTCTCACAATCTTCACAAGAATCCTACAGAAACAAGACGTATCCCCCGATTTACTGATGATGATCC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTCAGCCCAGAGATGCACTCTCCATCGGCTGAACCCAACTGGAAGTCGGAGGGTAAAGGGCCCATGACTCAGTC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CGTTCAGGCTGACCCGCCTGGGGCTCAGAGCATAACAGACAAGGGTGGGGAAGAAAAAAGAATGGACTTGGAGA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  AGCAAATGGGAAATATTCAGGCACTTCTGATCTCAGTTTGGCCAGTCGGCTCCCCTCTCTCTGACTGTAAACAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGAGATACAGAAACTGTCATTAGAAATGAGTAGTGTTAATGATCCATGACAGAAAGCTCGTGAATTTCTACTGC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGAGGAGGCTTGAGCTTTTCTGTTTTCATTCTTTCTACACATCGGGAGCGGAGCTCCCCAATGCCTTTCTGATA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CATCGCTACTTCTGCTTCACCTAATCAAAGGCACTTACTGCTGCTCAGAACCTCAGGCCTCCAACTGAACAATG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AACAGGTTTTCTCTCCATCACCCCCTGTTCTCTAGTGTGAGTAGTTAGATTACTGCTTTTATGTCTGTCTTCCC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AACTACAGTCCACAAAACGGCTCATATTGAACAGTAATACAAATAAAGAGAAAAAGGAGAGAAGACAAGAACAA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AAAGTAATGAGTTTAGAAACTTGGAAAGTAGAAACTTCTTTGGTATGTTCCTGTTGAAAACCACTGGTCTCATC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTCCACTTTTTCACATTGCTGTTTCAGAGAAAAACTTAATTATACTTAATTATAGGGTTGTAATGTTTATAGGG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTGGTTATTCTGGTTAGCCAAATTTACTGGTTATCTGTTTAGAGCCTTTGAATTTTAATTCTAGCTGACACATT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGTTAAAACATTATTAGCTTACCTTTCTTCCTTAATGAGTACTGGATCTTCCCAGAGAAAAGGTTCCCAGTCAT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TTACCTGGAATTTTTTATACATATTTGCAGCTGTTCTTTGAGCTCCCTAAAGAGCATAATTAGAGACATAACAT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TCACTCAGATTTTCTGCCCTTCTTTGTAATAAGTCAATGAGCCAGTCATTTATTCCACAAATATTTGTTGATAC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CTACTGTGTGCCTGTCAGCAGTTCTCCAAGCAGGGGCTACAAAAATAAAAAGATTGTCTTTTAATGAGGAGCAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTTCGAGTCTTAGCTCTTGGTACTCCCTCTGTCTAGTAATATCCATTTTTATACTTAGTATTTTAATAAATAAC  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TCTTCCTCAAATTATTTTAAAACACACAGTAACAGAAAAAATTATTTATTTATTCTACTTTCTCTTAATTACAC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CTGTGGGGAGCTTGGCGGGGCAGACTCTGGGTTTCCAGCCAAGGTCTTTCTGTCCACCTGGGGGCAGCAGACCC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TCACACAGAAAAGTACCTCGAAGGAAGCAATTGGCTTTCTGAGCTCCTGGCTTTCAAACACAAGTCTTCCAAAT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TATGGACCCATGAATATTCTAAAGACTTATACTCGAAGGACGCTTCCAAAATCAAATAAATTTGGGTTGAACCA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  AGTTAAATAGGGTTTTAACCCTGCAGGACTTCTCACGATGTTTAATATACTTTTTTTTTTCTTTTCTTTCTTTC  1924

Query    1  ----ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTC  70
                |..|||||||..|.|.|.| |||||||||||||.||||||.|||||||||||||||||||||||.|||||
Sbjct 1925  TTCGACAGAGTCTCGCTGTATTG-CCAGACTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAACCTCCGCCTC  1997

Query   71  TCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGC  143
             |.||| ||||..||||||||||||||.||||||.||||||||||||.|||||||.|.|.|.||||.||||.||
Sbjct 1998  -CCAGGTTCAACTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGACTACAGGCGCCCACCACCACGCCCAGC  2070

Query  144  TAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCA  217
            ||||||||||| ||||||||||||||||||||||||||||||.||||||.||||||||||||.|||||||||||
Sbjct 2071  TAATTTTTTTT-TATTTTTAGTAGAGATGGGGTTTCACCATGCTGGCCAAGCTGGTCTCGAATTCCTGACCTCA  2143

Query  218  AG------------------------------------------------------------------------  219
            .|                                                                        
Sbjct 2144  GGTGATCCACCCGCGTTAGCCTCCCAAAGTGCTGACATTACAGGTGTGAGCCACTGCGCCGGGCCTAATATAGT  2217

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2218  TTTGTCGTACAAAACACGATGGCATACTTGCTCTGTGCAAAGTACATCACCCACAGTGGCCTATTTAAACTTGG  2291

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2292  CAACAGTCCTATGAGATAGGCACTAATTGTGTTCCCCATTTTACAAATGAGGAAACAGAGGCACGGAGCTTATA  2365

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2366  ACTGGTGGCTGAGTTTCCGGTTGGGGCCATCTAGTTACAGAACTTGCATGCTTAATCATGACACCGTAATGCTT  2439

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2440  TGCAATGGGAGATTCCAAGAGGGGGAATTTGACATTCAGTGTTTCCCAAATTTATTTGGCTTTGGAACCCTTTT  2513

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2514  ATTCCTTCTAATCAACATAGAGGACAAGTATGTAATGGGATACTCTGATAAATGCTTCAATAAAGCAATGGCTT  2587

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2588  TATGCCGCCCCGCTTTAAAAGATAACTAAAAATATAAGTCCACAGGCCCATCATATAATTGAACAGGTAACGAC  2661

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2662  TGAATTTTGATTTGATGGAAAGACTCTTATCATATTAATCTAAGTTCTCAAAGTGAATGCCACTAAACCAAGAC  2735

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2736  TATTCAGTGTATTTGAAGTATGTACAATACCAGTCCGAATTGGGACTTCTCAGGAAGAAAAAAGGGTATATGGC  2809

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2810  AGATGGGTAAGAATAGAAAGCCACAGGTCTAGCAGGGAAGCTAAATATGGTGTGGAATGTGTTGGGGAGATGGG  2883

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2884  AAAAATGCTCACCTCTTCATGGAAGTTCGAAAAGAAGGCTGAGATTCTAAATAATGCTGGAGTATTGCAGCTGG  2957

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2958  AACAAGCATGATAGCAATGGCCAACACAAGGCCTTTCTAGAATAAATCTAAAACAATTAAGAGATAATATGATA  3031

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3032  GCATTGGGAGATATACCTAATGCTAGATGACGAGTTAGTGGGTGCAGCGCACCAGCATGGCACATGTATACATA  3105

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3106  TGTAACTAACCTGCACATTGTGCACATGTACCCTAAAACTTAAAGTATAATAATAATAAAAAGAAAAGAAAAAA  3179

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3180  AAAAGAGATAATATGCCAGGGGGTTGATGCCAGGTAATACTGATAGTTACCTTAAACAATGTTTTCTCAACTTC  3253

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3254  AGTTTTTTACACACCAACTTCATGATTTTTTTCTATCAAGATACGACTACTATTATTTATCTAGCGTTTTTTAA  3327

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3328  ATTGTCTTATATCTTTGCTTAAATTTATTTTTTTAAACATTAATATCTGAGAATTCATCATTTTGAAGGAATAA  3401

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3402  TTATATTGTTCTAATATATAAATTTTAAAGTTAATATCTTTATTCCATCTAAAGTGGTATGTGTACTATTCTTT  3475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3476  GGAAATGATTTTCTAAAGGATTAAAAACTTGCCAGTGTTGGAAAAAAAAGGAAACAGGAAAATTAAGACTGAGT  3549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3550  TAAAGAAGGTGAAAACAAAATTGAAGAATAAGACTAAAGGTTAGACATGAAATAGATCTGTCTCTAATTAGAGG  3623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3624  TGCAATGTCAAATTTTTTTGTAGATCGTTCTAAAAATATCACTTGTTCTTTTGCTTGTATTTTAATTCAATGAT  3697

Query  220  ----------------------  219
                                  
Sbjct 3698  TAAATAAACAGATGACCTAGTT  3719

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