Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
NR_037582.2
Aligned Length:
5544
Identities:
187
Gaps:
5330

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCTTTCTGGGAGTAGCCGGTGCTGAGAGAACCGTGGCTGGCAAAGATGATTCAGGCGATTCTGGTTTTCAACAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCATGGGAAGCCACGGCTAGTCCGCTTCTACCAGCGTTTCAAGAAATTCAACAGCAGATTGTTCGAGAGACTTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCATCTAGTCCTCAAGCGGGATGACAACATCTGTAACTTCTTGGAGGGTGGAAGTTTGATTGGTGGCTCTGACT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACAAACTGATCTACCGGCACTATGCTACCCTCTACTTTGTATTTTGTGTGGATTCCTCAGAGAGTGAACTTGGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ATCTTGGACCTCATCCAGGTTTTTGTGGAAACTCTGGATAAGTGTTTCGAAAATGTGTGTGAATTGGATTTGAT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTTCCATATGGATAAGGTGCACTACATCCTCCAGGAGGTGGTGATGGGTGGGATGGTGTTGGAAACAAACATGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATGAAATCGTGGCTCAGATTGAGGCTCAAAACAGGCTGGAGAAATCCGAGGGTGGCCTTTCAGCAGCCCCTGCG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGGGCTGTGTCTGCTGTGAAAAACATCAACCTGCCAGAGATTCCTCGGAACATCAACATTGGCGATCTCAACAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CAAAGTTCCCAACCTGTCCCAGTTTGTCTGAGGATCAAGTATTGGCCTGAAATAGAGTCCTTAAGACAAGCAAA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GACAAGCAAGGCAAGCACGTCTGGAAACAGAACCCATTTTGAGCCTTAGAAGAGTCAAGCCTCAGGACCTGGAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACTTTGTGTCTGGGGAAGACTGTTTGGCATGGAATAGGGAAGGGATTCCTATTGACACTGCTCGGGTGCACCCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GTTCTCACATGTGCAGTCATGCCGTTCTCTGATGCATACGGCCACTGCAGATGTGAGGGGCCCTGCCTTCCTCA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTAGGGAGTCAACATGCCCAAGTCATTTGCACCTTTACCTCTCACATGGATGCTCCCAAGGGTTAGGGACTGCA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TTGAGCAGGCCCACCTGCTTCCCAGAACCTCCTCACTAGGGCTGAGCACCTTCTCTGAGTAGAGTCTTCATCCT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TAGCACCACAGACTTCTGAGGTCCTGTGCCCTTTACTTGCTGGTGAGGTGTCATAGGTAGAAAAGGGCTGGCCC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTCAGATCTGGGGGTGTGGTGAGTGGCAAGTAAGGGCAGAATTTTAGGAGAACCAGAGTCACCCGCTGGCTCTA  1184

Query    1  ---------------------------------------------------------ATGGAGTCTCATTCTGT  17
                                                                     .||||||||...|||||
Sbjct 1185  CTGAGATTGTTACACCCAGAATCCTTTTGTGTTTTTTTGTGGTTTTTTTTTTTTGAGGTGGAGTCTTGCTCTGT  1258

Query   18  CGCCCAGACTGGAGTGAAGTGGCATG--ATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTC  89
            |.|||||.||||||||..||||  ||  ||||||||||||||||||||||||.||.||.|.||||||..|||||
Sbjct 1259  CACCCAGGCTGGAGTGCTGTGG--TGCAATCTCGGCTCACTGCAACCTCTGCTTCCCGGGTTCAAGCATTTCTC  1330

Query   90  CTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTA  163
            |||.|||.||||||..|||||||||||||||||||||.|.|.|||||||||.|||||   ||.||||||.||||
Sbjct 1331  CTGTCTCAGCCTCCCCAGTAGCTGGGATTACAGGCACCCACCACCATGCCCAGCTAA---TTGTTGTATGTTTA  1401

Query  164  GTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCT-GACCTCAAG-----------------  219
            |||||||..||||||||||||||||||||||||||.||||||||||| |||||||||                 
Sbjct 1402  GTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGGCTCGAACTCCTGGACCTCAAGTGATCTACCCGCCTTGG  1475

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1476  CCTCCCAAAGTGCTGGCATTACAGGTGTGAGCCACCGTGCCCGGCCACCAGAATCCTTTGGTATAGCCAAGCCT  1549

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1550  TTTGGTTACCGCCTCATGAAGAATATGCTTCCCGCATTGTCCTAGTCCCAGTTGTATTCTCACAGGTGTTATGT  1623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1624  GCAGGACACAATCCAAATCATAAACCTGGCTCATGCCCAACACATTTCTGCTAATAGGGAGAGGGACCCACCAC  1697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1698  ACACCCACACATGCCAGAGGTCCCTCCTCACAGAGGAGAGGGCCTGTGTCTGTAGAAGGTTAAAGCTGACAACA  1771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1772  TGTGAAACATCCCAGAATTATGACTCTTCCCAAGTTTAAAATACATTCTCCTCATGAGAGCAGAAGGTTTGTTG  1845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1846  CTGTGTTGTGAATGATGAGCTGCCTCCATAGGGAACCCACTGCCACCTGGGCCAGCTTCTGGAGCATGAGAACC  1919

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1920  TGAGCCAGGGTCACCCTTGTGGGGCCTGGACATGACGCACGCTGGCTGCGACTAGGAGCAGGGCTGCCTCTTCT  1993

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1994  CCCTCCCCAAGGTCTGCTTGTGGGCACGCTCTGTTCCCTCAGGTGCCATTCTCCCAGGGCTTAGGCGCCCATAA  2067

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2068  ATGTTCTTTCTGTGGTGGAGTAGGGCCTCCTGCTTCCATACTGTCGCATGGGCTAGATCTCAGGTGTGGTGTTG  2141

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2142  AGCCACCTTAAGATGAGGGCTGCTTCGCAGTAAAGTTTCCAGCCTGGGCCCCTCTTGGGCCTTCTGGCTGGGGA  2215

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2216  CCCTCAGCCTCCTGATGCTGTTGCAGGGCAGGTCTGAGAGGGTGCCCAGCAGCACCCGGTGTCAGGGCCACCTT  2289

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2290  GTTTTCCATTTTTGAACAGCGCTCCCTGTGGTTTGTGCCCACTGCTCAATACAGCCTCCGATCCTCACTCTTGA  2363

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2364  AAGCTCCATGATAAGCACAGAGATGGGCAGTGTGGGTCAGAAGGTGGGCCGCTTCCTGTGGAAGAGGGAAGTGT  2437

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2438  AGGTGAATAGATATCAAAACCCCTGATGTCATTCTTTTGAGGGGTTGGATTTTCTTTTTTCTGGCAGACATTTC  2511

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2512  AGTACATTCACATTTCTCTCACATTTGCTGAATGTGAGATCAGAATAAAGGAGATCGGCGTTTATTTCGTACCT  2585

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2586  TCTGTAAGTTGGCATGAGCAAGATCATTCAACTGTCCTTACAACAGGCATTCTTATCCCCATTTTGCAGATGAC  2659

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2660  GAAAGTAGACCCAGCTCCAGTAACCTTCCCTTAGATTACACGGGGCTGAGATCTGAGACTGTTCACTTGACTCC  2733

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2734  ACTGTCCTTTTCTTTCCTCGCTGCTTAAGATGGCTTCTCCCAATGTTATCATCTTCTTTTTTATAGATAAGGAA  2807

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2808  ACTGAGCCTCAGAGAGTCTGACTTCTCACAAACCGTGGTCTAAATAGGCTTGATTTTCTAAGGTGGCCAGTGAT  2881

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2882  CATGTCATAGAGTATAAGAGCCAAAGAGTCGTCTGTGTCCCTCCATTTAACTGATGTTGAAGCCGAAGCCCAAG  2955

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2956  GTGGTAAATGTTATGTTGAGGGTCACAAATCCAGAGCCACATCCCTCTTCTTGAGTTCGTTTGTTACGTGGTTT  3029

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3030  AATGCATTACTGCAGGACAGCCCTTATGCTAGATTTCCTGGGATAGCCTAGATTTTGAATGTTTTGCCTGCCAG  3103

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3104  AAACCAATGGTTTTAAAAAATCATTGAGTGGTCCTACAGATTCAAAGCGAGCATCCAAACATCCCTCACATGGC  3177

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3178  CTCTTACAATGACATAAAACTGAAGCCCACTTTTTTATTTGGAAAACTCAATCCCTTTGGACAAGCCACAATAA  3251

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3252  TTTTTCATTAACTACTTGAGGTTGCCTGCAAATTCAGCTAGCTTTCCAGCCTGCTATCAGCAAAGCCATAAACA  3325

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3326  TCTTTTTTAAAAATAGGTTAAGGTTGGCCAGGTGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCG  3399

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3400  AGGCGGGCAGATCACGAGGTCAGGAGATCGAGACCATCCTAGCTAACACAGTGAAAACCCATCTCTACTAAAAA  3473

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3474  TACAAAAAATTGGCCAGCCGTGGTAGTGGACACCTGTAGTCCCAGCTACTCAGGAGGCTGCGGCAGGAGAATGG  3547

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3548  CATGAACCCGGGAGGCAGAGCTTGCAGTGAGCCAAGATCGCACCACTACACTCCAGCCTGGGCAACACAGCAAG  3621

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3622  ACTCCGTCTCAAAAAAAAAAAAAAAAAAAATAGGTTAAGGTTGTATAGAATACTAGGCTTTCCTTTTTTTGTGA  3695

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3696  GATGGGGGTCTCACACTGTGGCTCAGGCTGGAGTGCAGTGGTGTGATCATGGCTCACTGCAGCCTCGAAGCCCC  3769

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3770  GGGGTCAAGTGATCCTCTCACCTCAGCCTCCTAGGTAGCTGGAACCACAGGCACGCAACCACCACTCCTGGCTA  3843

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3844  GTTTTATTTTTTTAGTAGAATAAGGTCTCACTATGTTGCACAGGCTGGTCTCTAACTCCTTACCTCAAGCCATC  3917

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3918  CTCCCGCCTTGGCCTCCCAAACATGTTGGGATTACAGGTGTGAGCCACTGGACCTGGCCAAATACTGGGTTTTC  3991

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3992  AGTGCTCACTGCCACTAATAAAAATCTGAAATTCTTTCATTATGCAATTTCTAAGTGCCTGGTGAGGGCCAAGC  4065

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4066  TCAGTTCTAGGCTCTGAAGATTAAGAGAGAAACAAGGCTCTGTCTGCTCCTGTTGTCTCTGTGAGCATCTTTGA  4139

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4140  CAGAGTGCTCAGATTGTTGGGATATAGTGCATCGGACTGGCAGCCTGAATTTGTGGAGACCGCAGTCAGTAACT  4213

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4214  TTGTGATATATGGAATATTTAGAGGACAGTAACCCATTTCCCTACGCCCTACCTGATCACATCGTGCCCTGCTG  4287

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4288  GGCCATACCCCAAACAGCCCACCTTCCTCTAGGCCTGGCCATGGCCCTGTGCCTGCCACATTGAGGATTAAGTC  4361

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4362  AGGATATCTTGAGCCCTCTCAAATCCCTGTTTATTCAGGCCTCTGCCACATATAGAGCCAGCCTTCTGTCCCCA  4435

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4436  CCACTTCCACTACCATGGAGCCCACTTAGTAAAACGCTCTCTGGGCCCAGCTTCGCCAGAAAAGACACCAGGGG  4509

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4510  AGCAAGGCTCAAACCAGGGGCAGCTAAATCTGATCTTGTGGACCAGTCTCTAGTAAGGGCTTTCAGCGTGGCTG  4583

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4584  TCTGTCCATTGCTTTCCAAATAGGATGCAGCAATGATTGGTACATGGGTATTAAGATCGGTAGTAGGGGCTAGT  4657

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4658  CCAAGTTTAGCAATAGCCAAACTGGAGAGCCTCTGAAGTATGAGAGTCCCAGAGGGATTTGTCAGCTCCTGGCA  4731

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4732  GACATCCTGATTTTCACCTTCCTGAGTCTACCCTACCCCAGAGGGTGCCAGTCTCACTGTGGTGATGGTTAGCC  4805

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4806  CAGTGTGTGCTGCACTCACACACCAGCACGGGGTCCGTGCTTGCAGGCTGGTGGATGCTGTCCTCTGGGTTAAG  4879

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4880  ACTGTCTCCCTTCTCGGGAGCACTGGAGGGTTCTCCATCTGCGTGTTTCAGTGGAAGTTGGCAGATACGAAAAC  4953

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4954  AGGCCCCTATAGGGAAGCAGTTCCATGAAAATGATTAATTCTTTCCAAAAGACTTAAAATTTTTTCCTATTTCA  5027

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5028  ATTTTCCTTTCAAAAAAGGAAATACATTCATGTAGTTCAAAACTTAAGAAAACAAAAGTCTGTTCAGCAAAAGA  5101

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5102  CTCCCACTCCGGTTCCCCAAACGCTGAGCCCCACCCCCCATCCCTGGTAGCAAGAAGTGTTTCCAATTTTAAGG  5175

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5176  TTAAGAAACAAAGTCCCTGGATTTGTGTTAGGGATGTCTTCCTGAGAGTGGGTTGTGTTCCGTTTGACCCTGGC  5249

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5250  GGTTGACCTCGGCCCACTAGGATCATGCCGCCCTCTCCAGGGAGGAGGGCCTCCCCATCACCCTGTACAGTGGC  5323

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5324  ACCCCAGCCCTGGCACTGCCCGCCCTTGCTCAGCGTACCTTTCCCATGGCACTCTGACGTACTGGATGTTTGGT  5397

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 5398  TTCTGAAGTTACTGGCTGTTTACCCTGCCGGGATGTAAGCCCCTCCAGGGCAGGGGCTTGTCTCGTGTTCAGTG  5471

Query  220  --------------------------------------------------------------------  219
                                                                                
Sbjct 5472  CTGCATCCCAGCTGCTGGGCACGGTACCTGGTCCATGGCGTTCAATAAATAACTGTTGGATGAGTGAA  5539

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