Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
NR_046662.2
Aligned Length:
3654
Identities:
122
Gaps:
3517

Alignment

Query    1  ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATT  148
                 ||.||||||||||||||.||||||.||||||||||||||||||||.|..||.||||||||||||||   
Sbjct    1  -----AGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCAGCCACCATGCCCGGCTA---  66

Query  149  TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---  219
            .|||||||.|||||||||||||.|||.|||||||||||||.|||||||||||||.|||||||||.||||.|   
Sbjct   67  GTTTTTGTGTTTTTAGTAGAGACGGGATTTCACCATGTTGCCCAGGCTGGTCTCAAACTCCTGATCTCAGGCTC  140

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  141  AAGCTACCTTCTTGATGAAAAATTCTGGACGTGTTCTGAAAATCACAGTCATCCCTAACTTCAGTGGAAAAGAT  214

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  215  TCATATTGTCCAGCTGAACAAGGATTGATACTTAAAACCAGGGATTTCCTAAAATGAAAATGTTTCTGTGGATA  288

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  289  AAACTGATTACATGCAGAGACTGGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATG  362

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  363  AGGCATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTGGGCAGTTGCCTCTAGC  436

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  437  CTGGTGGGAGGTGTTCCTCACACCCAGGACTCTCATCCATGGCAAAATAAAAAGTGAGATATCGACTGGGCATG  510

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  511  GTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGTCGAGGCGGGTGGATCACCTAGGCCAGGAGTTCGAGACC  584

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  585  AGCCTGGCCAACATGACGAAACCCCATTTCTACTAAAAATACAAAAATTAGCCATGTGTGGTGGAATGCACCTG  658

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  659  AAGTCTCAGCTACTCGGGAGGCTGAGGCACAATAATTGCTTGGACCCAGGAGAAGGAGGCTGCAGTGAGCCGAG  732

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  733  GTCGTGTCACTGTACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAGTGGATATCACAT  806

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  807  CAGAGAAGCTCCTGGCCAGGTGGCCTTGAGGAACAGGGATGAGTTCGGCACTTAGAGATGGAGTTGGCTTTCCC  880

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  881  CGTTGGAGGGAAAGGCATGAGAAGGGACATAGGTAAGAGGAAGTAGAGTAGTGCAGGGGCCATTGAGTAGTAGT  954

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  955  CCTTCCAAGACAGGACGTCATCATAGAACCACTTTCTCTGAGGAAGCTCTGCTTGGGGGAGGTTTTAATTCATG  1028

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1029  AGGAAGGCAAATTCAATGGCTCTCAGGTGAGGTGGGAAACAGACACCTACCAACACTCCAAAGAGAACATGTAC  1102

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1103  CTCTATAAAAGGGCACAGTCTAGTGAACAAAGTCCACAGCTCTGGGTTTGATTTCTAGCACTGTCACTTAATAC  1176

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1177  TGTGTGACCTTAGACATTCACTTAACTCTCTCAGCCTCAGGATACAATCTGTAAAAACAGGAGAATGCTTGTTC  1250

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1251  CCTGTGCCTTATAGGATTGATATGAGCATCAGGAGAGACAGTGGGCACAAAATAGCACTGTCAACTACTTCTTT  1324

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1325  CTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTTTTAAAGTTAC  1398

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1399  TCGATGAATGAATGAATAAATGAATGAGTAAATGAATGAATAATATCTAAAGGCCTCCAACTAAATAATAATCA  1472

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1473  ACTTCCTAACCGTACTGAAAGCCTTTAATTGACTTTGGGGCTGTTTGGCCTGGAGGAGGCTCTGAGTTAGTGGT  1546

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1547  GATCAGTTGGTGTCATGGTAGAGAAGAAAGCCTGTGAAGGTGGAGTCATTGTCATTATCAGCATAGAGTCCATT  1620

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1621  ACGCTCTCCTTCCCCATACACCTGGAGCCAGACTTGGTCGCCCACCTCCAGATGCAGGAGCACAGAGCCGGAGG  1694

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1695  CCTGGTCCACATTATTTTCCTGGTACTGATCATAGGTGAAGAGCATAGCCTTGTCCTTCTTGAAGAGGCTGACC  1768

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1769  TTCACATCCTTCATATAGACTGTGATGTGGTAGGCAAAGTAGTACAGCCCAGGAATGTTGCAGTGGAATTTACC  1842

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1843  AGTGGAGCCATCATAGTGGTTTTGCTGATTGTAGAAGATCTTGGTAAAGCGAATGGGCATGTTGGGGATAGTAA  1916

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1917  CGTAAGTCTCCAATCCCACACTGAATGCTGAGCGGTATACATAGGCACCTTCTCCAGGTTCTCCTTTCCTGCCT  1990

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1991  TGGATTCCCGGAAAGCCTCGGGGACCTTCAGCCCCGGGTACTCCGGTTTCACCGATGTCTCCCTTAGGACCAAT  2064

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2065  AAGACCTAAGGAATGAGAAGACCTCAGTGACTACAAAGAACAGAACTCCTGCCTAGGATGTCTCTCCTCCTCTA  2138

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2139  TTCTGCCTACCCATCATTCAAGGCCTAGCTGAAGCTCTGCCTCCTCCTTGAAGCCTTCATTCTTCATCAGGTCC  2212

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2213  ACGGGGTGCCATCTCTGCCATCACGGCCTGGGGCCCCATTATGGCCCGGATGCCCTGGGATGCCCGCCATCCAA  2286

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2287  CCTGTGCAGGCCCCCTTGGGCAGGGGAAGCAGGACTCCGGGCCCTTGAGTCGTGGTTTCCTGGTCATGACCGGG  2360

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2361  CAGAGCTAATAGCAGTAGAACAGCTCCCAGCAACAGCATCCTGAGCCCTGGAATCCACATGTGCACTGTCAGCC  2434

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2435  ATGGAGAGACAGACCCCACACACACACCCAGTTGGGACCTACAAAGGACTCCGTCCATCTCAGCAGAGTCTACT  2508

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2509  TCTAGGAGCTGCTTTCTAAGTATTCAACTTTTCCAGGAAGACTTTTCTGAATATTGCAGCCCACCTTGATCTCT  2582

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2583  TTCTGCCCTGAAATCTGTAATACTTAGCATTATTCCCTGTGTGTAGTCTCCTTTCCTCACCAAGATTATGAATT  2656

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2657  CAGTGATTGCACAGATGACACTCCTCTAATTTTCCCATGTCTGAGCACAGGACCAAGCACAGGGAAAGCTCCAA  2730

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2731  GAGTCGACTTGCCAAGAATCCATCCTTGGGTTTCCCAAGTACGATGACACAGATTGCTCCATTCAATGCTAACC  2804

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2805  AGCTTCTCTCCTCTGGCTCCTTTCTTCTTTTTCTTTCCCCCCTTCTCTCTCATTTTCTGTGTCTATTCCTCCTT  2878

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2879  CTTACTCTCTCATTCTCTTTCTTCCTCTACCCCTCTCCTGGGGCACATGTTTGACTATTGGGTATATTACATTT  2952

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2953  GCACACATGCACACACACAAACACACACAGAGAAAAAGAGAGAGAGAGGGAGGGAGAGACTCACCTTGTGTTAA  3026

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3027  GCAGACAACGAGAGACACATCATCCCATGAACATATCCCCTGGCCCTTTGTTTGCCTGAGCCATCTTTAGCTGC  3100

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3101  CCCTCCTCCCCTGTCTAATCTCTATTCAGCTTTCAGGACCCAGTTTGGATGTCATCTGTTTCAAGAAGTCCTCC  3174

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3175  TTGTTCTCCATCTCACTCCTTGGCTGGTTCTTTCCCCTCTGTGTTTCTCCAGTGCCCTGGTAATATGGTTTGGG  3248

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3249  TCTGTGTCCCCACCCAAATAGCACGTCGACATGTGTTGGAGAAGGGGCCTGGTAGGAGGTGACTGAATCATGGA  3322

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3323  GGCAGACTTATCCCTTGCTGTTCTCATGATAGTAGGTGAATTCTCACAAGATCTGGTTGAAAGTGTGTAGCACT  3396

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3397  TCCCCTATATTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCCTGCTGCTGTGTGATGTGCTTGCTTCCCCTTCGC  3470

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3471  TCTTTCTTCCACCATGATTGTAAGTTTTCTGAGGCCTCCCCAGCCATGCTTCCTGTACAGCCTGTGGAACTGTG  3544

Query  220  ----------------------------  219
                                        
Sbjct 3545  AGTCAATTAAACCTCTTTTCTTTATAAA  3572

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