Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_046662.2
- Aligned Length:
- 3654
- Identities:
- 122
- Gaps:
- 3517
Alignment
Query 1 ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATT 148
||.||||||||||||||.||||||.||||||||||||||||||||.|..||.||||||||||||||
Sbjct 1 -----AGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCAGCCACCATGCCCGGCTA--- 66
Query 149 TTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG--- 219
.|||||||.|||||||||||||.|||.|||||||||||||.|||||||||||||.|||||||||.||||.|
Sbjct 67 GTTTTTGTGTTTTTAGTAGAGACGGGATTTCACCATGTTGCCCAGGCTGGTCTCAAACTCCTGATCTCAGGCTC 140
Query 220 -------------------------------------------------------------------------- 219
Sbjct 141 AAGCTACCTTCTTGATGAAAAATTCTGGACGTGTTCTGAAAATCACAGTCATCCCTAACTTCAGTGGAAAAGAT 214
Query 220 -------------------------------------------------------------------------- 219
Sbjct 215 TCATATTGTCCAGCTGAACAAGGATTGATACTTAAAACCAGGGATTTCCTAAAATGAAAATGTTTCTGTGGATA 288
Query 220 -------------------------------------------------------------------------- 219
Sbjct 289 AAACTGATTACATGCAGAGACTGGAATGGAGTTAATTCTGGGTAGATATGGGATTCAAGAGATTGGTCTTCATG 362
Query 220 -------------------------------------------------------------------------- 219
Sbjct 363 AGGCATTTATCAAGGATCTGCAAGGGATTTAGAGGTGACGGAAGCACAGTCCTTCCTGGGCAGTTGCCTCTAGC 436
Query 220 -------------------------------------------------------------------------- 219
Sbjct 437 CTGGTGGGAGGTGTTCCTCACACCCAGGACTCTCATCCATGGCAAAATAAAAAGTGAGATATCGACTGGGCATG 510
Query 220 -------------------------------------------------------------------------- 219
Sbjct 511 GTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGTCGAGGCGGGTGGATCACCTAGGCCAGGAGTTCGAGACC 584
Query 220 -------------------------------------------------------------------------- 219
Sbjct 585 AGCCTGGCCAACATGACGAAACCCCATTTCTACTAAAAATACAAAAATTAGCCATGTGTGGTGGAATGCACCTG 658
Query 220 -------------------------------------------------------------------------- 219
Sbjct 659 AAGTCTCAGCTACTCGGGAGGCTGAGGCACAATAATTGCTTGGACCCAGGAGAAGGAGGCTGCAGTGAGCCGAG 732
Query 220 -------------------------------------------------------------------------- 219
Sbjct 733 GTCGTGTCACTGTACTCCAGCCTGGGTGACAGAGTGAGACTCCATCTCAAAAAAAAAAAAAGTGGATATCACAT 806
Query 220 -------------------------------------------------------------------------- 219
Sbjct 807 CAGAGAAGCTCCTGGCCAGGTGGCCTTGAGGAACAGGGATGAGTTCGGCACTTAGAGATGGAGTTGGCTTTCCC 880
Query 220 -------------------------------------------------------------------------- 219
Sbjct 881 CGTTGGAGGGAAAGGCATGAGAAGGGACATAGGTAAGAGGAAGTAGAGTAGTGCAGGGGCCATTGAGTAGTAGT 954
Query 220 -------------------------------------------------------------------------- 219
Sbjct 955 CCTTCCAAGACAGGACGTCATCATAGAACCACTTTCTCTGAGGAAGCTCTGCTTGGGGGAGGTTTTAATTCATG 1028
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1029 AGGAAGGCAAATTCAATGGCTCTCAGGTGAGGTGGGAAACAGACACCTACCAACACTCCAAAGAGAACATGTAC 1102
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1103 CTCTATAAAAGGGCACAGTCTAGTGAACAAAGTCCACAGCTCTGGGTTTGATTTCTAGCACTGTCACTTAATAC 1176
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1177 TGTGTGACCTTAGACATTCACTTAACTCTCTCAGCCTCAGGATACAATCTGTAAAAACAGGAGAATGCTTGTTC 1250
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1251 CCTGTGCCTTATAGGATTGATATGAGCATCAGGAGAGACAGTGGGCACAAAATAGCACTGTCAACTACTTCTTT 1324
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1325 CTAGTCAGTTATCTGGTCATGTTTGTGAAGCTCCCCAGGACTGGGAACATAGCATATGATTTTTTTAAAGTTAC 1398
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1399 TCGATGAATGAATGAATAAATGAATGAGTAAATGAATGAATAATATCTAAAGGCCTCCAACTAAATAATAATCA 1472
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1473 ACTTCCTAACCGTACTGAAAGCCTTTAATTGACTTTGGGGCTGTTTGGCCTGGAGGAGGCTCTGAGTTAGTGGT 1546
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1547 GATCAGTTGGTGTCATGGTAGAGAAGAAAGCCTGTGAAGGTGGAGTCATTGTCATTATCAGCATAGAGTCCATT 1620
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1621 ACGCTCTCCTTCCCCATACACCTGGAGCCAGACTTGGTCGCCCACCTCCAGATGCAGGAGCACAGAGCCGGAGG 1694
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1695 CCTGGTCCACATTATTTTCCTGGTACTGATCATAGGTGAAGAGCATAGCCTTGTCCTTCTTGAAGAGGCTGACC 1768
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1769 TTCACATCCTTCATATAGACTGTGATGTGGTAGGCAAAGTAGTACAGCCCAGGAATGTTGCAGTGGAATTTACC 1842
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1843 AGTGGAGCCATCATAGTGGTTTTGCTGATTGTAGAAGATCTTGGTAAAGCGAATGGGCATGTTGGGGATAGTAA 1916
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1917 CGTAAGTCTCCAATCCCACACTGAATGCTGAGCGGTATACATAGGCACCTTCTCCAGGTTCTCCTTTCCTGCCT 1990
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1991 TGGATTCCCGGAAAGCCTCGGGGACCTTCAGCCCCGGGTACTCCGGTTTCACCGATGTCTCCCTTAGGACCAAT 2064
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2065 AAGACCTAAGGAATGAGAAGACCTCAGTGACTACAAAGAACAGAACTCCTGCCTAGGATGTCTCTCCTCCTCTA 2138
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2139 TTCTGCCTACCCATCATTCAAGGCCTAGCTGAAGCTCTGCCTCCTCCTTGAAGCCTTCATTCTTCATCAGGTCC 2212
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2213 ACGGGGTGCCATCTCTGCCATCACGGCCTGGGGCCCCATTATGGCCCGGATGCCCTGGGATGCCCGCCATCCAA 2286
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2287 CCTGTGCAGGCCCCCTTGGGCAGGGGAAGCAGGACTCCGGGCCCTTGAGTCGTGGTTTCCTGGTCATGACCGGG 2360
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2361 CAGAGCTAATAGCAGTAGAACAGCTCCCAGCAACAGCATCCTGAGCCCTGGAATCCACATGTGCACTGTCAGCC 2434
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2435 ATGGAGAGACAGACCCCACACACACACCCAGTTGGGACCTACAAAGGACTCCGTCCATCTCAGCAGAGTCTACT 2508
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2509 TCTAGGAGCTGCTTTCTAAGTATTCAACTTTTCCAGGAAGACTTTTCTGAATATTGCAGCCCACCTTGATCTCT 2582
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2583 TTCTGCCCTGAAATCTGTAATACTTAGCATTATTCCCTGTGTGTAGTCTCCTTTCCTCACCAAGATTATGAATT 2656
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2657 CAGTGATTGCACAGATGACACTCCTCTAATTTTCCCATGTCTGAGCACAGGACCAAGCACAGGGAAAGCTCCAA 2730
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2731 GAGTCGACTTGCCAAGAATCCATCCTTGGGTTTCCCAAGTACGATGACACAGATTGCTCCATTCAATGCTAACC 2804
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2805 AGCTTCTCTCCTCTGGCTCCTTTCTTCTTTTTCTTTCCCCCCTTCTCTCTCATTTTCTGTGTCTATTCCTCCTT 2878
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2879 CTTACTCTCTCATTCTCTTTCTTCCTCTACCCCTCTCCTGGGGCACATGTTTGACTATTGGGTATATTACATTT 2952
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2953 GCACACATGCACACACACAAACACACACAGAGAAAAAGAGAGAGAGAGGGAGGGAGAGACTCACCTTGTGTTAA 3026
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3027 GCAGACAACGAGAGACACATCATCCCATGAACATATCCCCTGGCCCTTTGTTTGCCTGAGCCATCTTTAGCTGC 3100
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3101 CCCTCCTCCCCTGTCTAATCTCTATTCAGCTTTCAGGACCCAGTTTGGATGTCATCTGTTTCAAGAAGTCCTCC 3174
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3175 TTGTTCTCCATCTCACTCCTTGGCTGGTTCTTTCCCCTCTGTGTTTCTCCAGTGCCCTGGTAATATGGTTTGGG 3248
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3249 TCTGTGTCCCCACCCAAATAGCACGTCGACATGTGTTGGAGAAGGGGCCTGGTAGGAGGTGACTGAATCATGGA 3322
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3323 GGCAGACTTATCCCTTGCTGTTCTCATGATAGTAGGTGAATTCTCACAAGATCTGGTTGAAAGTGTGTAGCACT 3396
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3397 TCCCCTATATTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCCTGCTGCTGTGTGATGTGCTTGCTTCCCCTTCGC 3470
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3471 TCTTTCTTCCACCATGATTGTAAGTTTTCTGAGGCCTCCCCAGCCATGCTTCCTGTACAGCCTGTGGAACTGTG 3544
Query 220 ---------------------------- 219
Sbjct 3545 AGTCAATTAAACCTCTTTTCTTTATAAA 3572
