Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_102347.2
- Aligned Length:
- 4088
- Identities:
- 186
- Gaps:
- 3880
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATCCGAGCGGGTTTGACGGAAGGAGCGGCGGCGACGGAGGAGGAGGATGGAGGCGGTGGTGTTCGTCTTCTCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCGTATCCTTGCCTGAGGCAGGCGAACGCCTTGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGGGACACGGCTGAGGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGATACATTATGGTGCCGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGTAACATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGCAGCTGAAGTCACACATGAAAGAAGCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTATGATCTTAGCTTTGATAAATGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTTCTTAAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGTATTTTTAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAATG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCT 2072
Query 1 -----------------------------------------------------------ATGGAGTCTCATTCT 15
||||.||||...|.|
Sbjct 2073 TGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGT 2146
Query 16 GTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTC-GAGGTCAAGCGATTCT 88
||.||||||.||||||||.|||||..|||||||.||||||||||||||||| ||.|| |.|.||||||||||||
Sbjct 2147 GTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTG-CTTTCTGGGTTCAAGCGATTCT 2219
Query 89 CCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGC-ACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTT 161
||||||||.||||||..||||||||||||||| ||| | ||.|| .||.|||||| ||||||||||||
Sbjct 2220 CCTGCCTCAGCCTCCCAAGTAGCTGGGATTAC-GGCTA---GCTAC---TCCTGGCTAA---TTTTTGTATTTT 2283
Query 162 TAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------- 219
|||||||||||||||||||||||||||||||||||||||||.|||||||||||||||.
Sbjct 2284 TAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTG 2357
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2358 GTCTCCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTT 2431
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2432 TCACCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAG 2505
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2506 TTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCC 2579
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2580 TTACTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGG 2653
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2654 AAAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCT 2727
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2728 GGAGTGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTT 2801
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2802 CCCAAGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTT 2875
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2876 GCCTAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACTGG 2949
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2950 TGTGAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGGGATAAAAG 3023
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3024 CACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAGG 3097
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3098 ACCTTAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGT 3171
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3172 AACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGG 3245
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3246 CCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTA 3319
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3320 ACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGC 3393
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3394 CTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAA 3467
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3468 CTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCT 3541
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3542 TAGTCCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCC 3615
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3616 ATAGACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTT 3689
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3690 TCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGC 3763
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3764 AGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAA 3837
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3838 ACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATT 3911
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3912 CTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCC 3985
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3986 CATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAACAATAAATGATT 4059
Query 220 ------------------ 219
Sbjct 4060 GTTGAGTGAATAAGTAAA 4077
