Nucleotide Global Alignment

Description

Query:
ccsbBroad304_12783
Subject:
NR_102347.2
Aligned Length:
4088
Identities:
186
Gaps:
3880

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATCCGAGCGGGTTTGACGGAAGGAGCGGCGGCGACGGAGGAGGAGGATGGAGGCGGTGGTGTTCGTCTTCTCTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCCTCGATTGTTGCGCGCTCATCTTCCTCTCGGTCTACTTCGTATCCTTGCCTGAGGCAGGCGAACGCCTTGCC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGGGACACGGCTGAGGTGGGTAATTCCAGAATTGATTGGCCATACCATTGTCACTGTATTACTGCTCATGTCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTGCACTGGTTCATCTTCCTTCTCAACTTACCTGTTGCCACTTGGAATATATATCGATACATTATGGTGCCGAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGGTAACATGGGAGTGTTTGATCCAACAGAAATACACAATCGAGGGCAGCTGAAGTCACACATGAAAGAAGCCA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGATCAAGCTTGGTTTCCACTTGCTCTGCTTCTTCATGTATCTTTATAGTATGATCTTAGCTTTGATAAATGAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGAAGCTGGAGAAGCCGTGGTTGAAGTCAGCCTACACTACAGTGCACAGTTGAGGAGCCAGAGACTTCTTAAAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CATCCTTAGAACCGTGACCATAGCAGTATATATTTTCCTCTTGGAACAAAAAACTATTTTTGCTGTATTTTTAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CATATAAAGTATTTAAAAAACATGAATTGAGTTTCTGTAGATTTCTAGTTCTCAACTTTAGCCTGAACGCCAAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACTTGAAGGTGTTTTTCATCCTCTGTATGTTGAAGGTGGTTATTTGTATGTAGGAACAGGACTGCCATCCCAGC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TTTGCATGCCAAAGAAATAAAGAACACACTTTAAAGGGCAAACTGAAGAGATGAGCGAGCAAAGGTGCCCTTCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGTCTACTGAAAAGTTAGAGTACAAAACAACACTGTTGATCTGGACAAAAGAAGAAAAATTACCCTTTTTGCTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTGTTGTGACAACTTCATTTAATATGGTTTAAAGATTTATGAGACTGTCAGCTAAAAGTCTTTTCACAAGAATG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TCAACAGAGAATGGCATCTCAAAATATATATATTTCTTTGCACAATTTGTGAAACCTTATAAGCCATTTTCCCC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGGTACAATGTAGTTCCTGCTGATAGAAAGGAAATATTTTGTCAAGAGCTTTCATTTAAAAGCTACTACCTCCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CAATCACCCCCAAACCCAGAAAATCCCCACTGGCTCTTGCCAGTCTGGTTTTCGTATTGCAGTTATTCCAATTG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TATTTGATCTCCCTGATAACGTATTTTCATGGGTTTGGGTAGAAGATGCTAATCAGATTAGAAGCAGGAATAGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TATTTGCTGTCTGTGAAATTGAGCCTTTTGGTGCGCCACGTGGTGCCAGATCAACACTTCTATCCCTCTGCACT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GACCACGTTGTGAACTGGGAGACCAAATGCAAGCCATTTCATGGACATAGCAATATACAACCAAACTCTGTTCC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTGGAGTTATATTGTAAACTCTTGCAGGTGGGAGAGCAGTTCACCTCCTTAGCTCTGTTTGCCAGCTCTTACAG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGTAAAATAAACCTGGCAATTTATCCTCAGTCCTAGTTTGTGGTTTAATGTTGCTATCTTAAGCACTGGCATTT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GGGCAAAACATGACTGTGTTCTGTGGGAGAATCCAAAGGCATTATTCACTCTAGTTGAGATAGAATTGGGTGGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TAAACAGGGTGTGTGGTACCCAAAAGATTAAATGTTACATGTCCTTTTAGTCCTTGACCAGGTCTAGCCTTGGC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGAAGCAAGGGAGCCACTAAGCCAAACTCCCTGTGCAGACAGACCATGTTTCAAGGCTGGAAGTAGTGCCCTGG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CAACACACAAAAGGAACGGTGAAATGGTAGGCAAAGTGAACTTGGCTCTGCTGGCCTCTTTGGGGTCACAGAAA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TTGCTCCTTGTGGTAATCTTATATTTCTGTCAGGCACAGGGCCAAGAAGCTGTGTAACAGACATTACTTTGCTT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GCATCTCTTTTTCATACCTTTTCCCTCTGAGGCAGCTTTTGCTTAGAAAACAGTCCCTTCACTCTGCCTTTCCT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCTAACTTCCTGTGCCTCTTCATGTTCTGCTCAAGCTTTTTAAAGCAACGAAGCTGTTGGAGAACTTAAATCCT  2072

Query    1  -----------------------------------------------------------ATGGAGTCTCATTCT  15
                                                                       ||||.||||...|.|
Sbjct 2073  TGCAACTGAGAGATAAGCTACTTAAAGGCGGTAGAGATCTTTTTTTTTTTTTTTTTGAGATGGGGTCTTGCTGT  2146

Query   16  GTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTC-GAGGTCAAGCGATTCT  88
            ||.||||||.||||||||.|||||..|||||||.||||||||||||||||| ||.|| |.|.||||||||||||
Sbjct 2147  GTTGCCCAGGCTGGAGTGCAGTGGTGTGATCTCAGCTCACTGCAACCTCTG-CTTTCTGGGTTCAAGCGATTCT  2219

Query   89  CCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGC-ACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTT  161
            ||||||||.||||||..||||||||||||||| ||| |   ||.||   .||.||||||   ||||||||||||
Sbjct 2220  CCTGCCTCAGCCTCCCAAGTAGCTGGGATTAC-GGCTA---GCTAC---TCCTGGCTAA---TTTTTGTATTTT  2283

Query  162  TAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG----------------  219
            |||||||||||||||||||||||||||||||||||||||||.|||||||||||||||.                
Sbjct 2284  TAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAAACGATCTGCCTGCCTTG  2357

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2358  GTCTCCCAAAGTGCTGGGATTATAGGTGTGAGCCACTGCGCCTGGCCATGTAGATGACTTTTGACCAAAATGTT  2431

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2432  TCACCTTCTCATTCAGATATTCTTAGTAACCAAAACAGTGACTCATGCAGTTGAGAGAGCCTTTGGGCTGTCAG  2505

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2506  TTTACAGTACATCAGGCTTGCTGAGGCTAAGCAAATCAGAAAGGTGCCATGTTTATAACAGAGGTCAAAGCTCC  2579

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2580  TTACTTCTGAAACATTAGCTGTGGTTAAAAACAAAAACTCTTCCTTCTTGTATTGCTTGTCTATCAAAGCCAGG  2653

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2654  AAAGTGGGGGATCACTGTAGTTAAATTTTTTTTTTTTTTAATTAGAGACAGAGTCTTGCCCTGTCGCCCAAGCT  2727

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2728  GGAGTGCACTGGCGCAATCGTGGTACACTGCAGCCTTGAACTCCTGGACTCAAGCAGTCCTCCTGCCTCAGCTT  2801

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2802  CCCAAGTAGTTGGGAGTAGGTGCACACCACCATGCCCAGCGAATTTTTTGTAGAGACAGAGGTCTTGCTATGTT  2875

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2876  GCCTAGGCTGGTATCAAAATTACTGGCCTCAAGCGATTCTCCTGCCTCGGCCTCCCAGATGTTGGGATTACTGG  2949

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2950  TGTGAGCCACCACGCCCAGCTCAAAAACAATTTTTTTAGGGGCACTTCTACAAATCATGAAAGGGGGATAAAAG  3023

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3024  CACTGACTTTAAAAAGCCATGTTTAAGATGCTATAAATGTTCTCCCCTTTTCATTGATTGGAGAGTTGTAGAGG  3097

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3098  ACCTTAGAGATCATTTTGTCTAACTCCCTCATCCCAAAGATAAACTGAGGCCTAGAGATCGTTCAGGGTGTTGT  3171

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3172  AACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGG  3245

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3246  CCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTA  3319

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3320  ACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGC  3393

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3394  CTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAA  3467

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3468  CTGGGAACATCTGAATGCTGAGGCCTAGAGATCGTTCAGGGTGTTGTAACTGGGAACATCTGAATGCTGAGGCT  3541

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3542  TAGTCCAGTGTTCTCTCTCCCTTACCACTCCTCTTCCCCTTCCCTCTATAATGGCAGTACCCAGGGCCCGGTCC  3615

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3616  ATAGACTACTATCGAGTGCTCCTATGTGCATCTTAGTACGTATCATTTTCCCTTGCCTTTTTCCTTCTATCCTT  3689

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3690  TCAGTGGTAGCAACTGCCCTTGCTAATCACCGTAACCTCGGCTGAGAAAGAAGAGGAAGCGAAATCCAAGATGC  3763

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3764  AGCTCAGTTCATCAAAGCCTAGCAGGTCCCCTCAGCTGCCTTTTCATGCCTGCCACAGACTACAGTAGGACAAA  3837

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3838  ACCTGACCTGGTCTTTGAAGTTAAGAGCTAAGAAAGCTTCCTATAGTAGTATCTCCCATGGCACTTACCACATT  3911

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3912  CTATCTGGTATTACAGTTATTTGTATGCAATTAATCACTCTTAGATTGTATGTTCCTGGAGGGCAGAATATGCC  3985

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3986  CATTCATATTTGTATCTTCTTCCTTCTGCTCTTGGCACCTAACACAGTGCCTTGCACACAAACAATAAATGATT  4059

Query  220  ------------------  219
                              
Sbjct 4060  GTTGAGTGAATAAGTAAA  4077

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