Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_110907.1
- Aligned Length:
- 2284
- Identities:
- 187
- Gaps:
- 2069
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGACTACAGGCATGCGCCACCACACCCAGCTAATTTTTGTATTTTTAACAGAGACAGGGTTTCACCATCTTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCAGGCTGGTCCCAAATTCCTCACCTCAAGTGATCCTCCCGCCTCAGCCTCCCAACATTTGTATACTTTTTGAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCACACATCTTCCTGAAAAGTGGATAGAAGTTTTCAACCTTCTTCGCAGGATGGAGGGCAGACACAGAACTTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AACACAGTGACAGGGGCTTCAAACGACTAAGTTCCGTCCAGGTACCCTTGGAGATGTGTGCTGCTGCGTGGAAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATGACTGAGCATGAGACACGCAGTGCCCGACCGCGTGGAGCCTACGTCCTAGAGAGGAGGCACAGGAACACCAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACACGAGAACGGGAACTGAGTCACCAGCGGGGAAGACAGACCTTATCCAAGTAGCTTCACTAAGAAACAGAACT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GATTAAAAGGGAAGAAATGTGGTTGTCTTACGGCAAGTCACAAAAGAATATGATGTGCTCTGGGGTAACCAAGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGGCTTCCCTGAGGAAGTGACCCCTGAACTGAGACCTAAAGACTGATTCAGAGTTAATGCATCATACAGCCCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGATGGAGAATCAGCATGTGCAAACGTCCAGAAGAAACCTACAGCAAGACCAGCACAGCCCAACAGCCCCAGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGGAGCCCCACGTCCTTTAGGGTGAGCCCAGGGCTGACCTAAGGAGATCCACAACATGGCTGAGAAAGACGGGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTGTTGTCTAGGGCCCACCTGGGGCTGCAGGGTATAGGCAGCTTCCAGCAGGTACTGTCGGAGCCCCGGGTCCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTTTCTGCAGCGTCACGGCCGCGAACACAGGCAATGAGAGCAGGTAGGGCTGGCCAGGCACCGGCCAGGTCACT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCAGTGCACAGTCGCCAGCCCCAGGTGTAGGACACTGCAGAGAGAGGTAAGCAGGCAGCACTGGTCAGTGGAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTCAGAGGGCTCTGGGCATGGGTGCCCGCAGCTGCCACATCAGCAAAGAAACCTCTTCTCTAATTTCTTCTGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAAAGGCACCATGTAGACAGGACTCCTGTGAGGCAGTGGTGTGTAGACCAGGGTTTCTCTGCCTCAGCACTGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACATTTGGGATCAGATCATCTTATTTGGGGGCTGTCCTGTGCATTATGGGATGTTTCGCTGAATCCTGGATCC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCATCCACTAGATGCCAGTAACCCCTACCAACAACCAAATATTTCTGCACATATTACCAAATGTCTCCTGGGGG 1258
Query 1 ------------------------------------------------------------ATGGAGTCTCATTC 14
|..||||||||.|.
Sbjct 1259 GTCAAAACTGCCCCAGCTGAGAACCCCTGGTAGACTTTTTCTTTTTTTTTTTTTTTCCAGACAGAGTCTCACTT 1332
Query 15 TGTCGCCCAGACTGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTC 87
||||.|||.|.|||||||..|||||||..||||||||||||||||||||||||||| |.||| |||||.|||||
Sbjct 1333 TGTCACCCGGGCTGGAGTACAGTGGCACAATCTCGGCTCACTGCAACCTCTGCCTC-CCAGGTTCAAGTGATTC 1405
Query 88 TCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTT 161
|||||||||.||||||.|.||||||||||||||||||||..|..||||.|||.|||||| ||||||||||||
Sbjct 1406 TCCTGCCTCAGCCTCCCGGGTAGCTGGGATTACAGGCACGTGGCACCACGCCTGGCTAA---TTTTTGTATTTT 1476
Query 162 TAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------- 219
|||||.|||||||||||.|||||.||||||||||||.|||.|||||||||||||||.|
Sbjct 1477 TAGTAAAGATGGGGTTTTACCATATTGGCCAGGCTGATCTTGAACTCCTGACCTCAGGTGATCTGCCTGCCTCA 1550
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1551 GCCTCCCAAAGCGCTGTGATTACAGGCGTGAGCTACCGTGCCCAGCCCCTGGTAGACTTTTTAAAAAGAGTGTC 1624
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1625 AGGCAATACTGTGTAGAACACAGGCTCTGCAGCAAGAATGCCTGGTTCAAATTCTAGCTTGGCCACTTCCCAGC 1698
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1699 TGTGTGACCTTGGACAAATTACTTAACCTCTCTGGGTCTCAATGTTTCTTTTTCATTATTATTATTGTTACTAC 1772
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1773 TCCCCAGACTCACTGTAAAGGCCTCAGTCTTTCTCATCTTAAACTGCTAATGATAATAGTTCCTGCCTCATGGC 1846
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1847 GTAGCTGTGAGGATTAACAGGTCAGTAAGTGTTGAGAGCAGCACCAGGCCTACAGTAATGTCTTTGGTAGTAAC 1920
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1921 TCTTATCCCGATTATAAAAATATATTTGTTAGCTGGATATGGTCGCTCACACCTGTAATCCCAGAACTGTGGGA 1994
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1995 GGCCAAGGCGGGTGGATCACCTGAGGTCAAGAGTACAAGACTAGCCTGGCCAACATAGGAAAAGCCTGTCTCTA 2068
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2069 CTAAAATTAAAAAAAATTAGCCAGGCGTGGTGGCAGGCACCTGTAATCTCAACGACTCAGGAGAATCGCTTAAA 2142
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2143 CCCGGGAAGCAGAGGTTGCAGAGAGCCGAGATTGCGCCACTGCACTCTAGCCTGGGTGACAGAGGGACACGCTA 2216
Query 220 ---------------------------------------------------------------- 219
Sbjct 2217 TCTCAAAATAAATAAATAAATAAATAAATAAAATAAAAATGTACTTGTTGCAGGAAATTAGAAA 2280
