Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_121676.1
- Aligned Length:
- 2167
- Identities:
- 187
- Gaps:
- 1952
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGTGTTTGTTTCAGTGGTCACTGAAGTAATCTCTCCGCAGGCCCATGCCAGCCATACTGCCCAGACTTGAATTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTCCAGAGAAGTTTCTCATCCAAGATCCCCAGTAAAGAAAGGACTACTGAAGGAAAAAGGAAAGAAAATAGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTCTTTCATCTTTATTCTGGGGTTTTCTGCAATTTTTTTAAAGAGAAAGGTAAGCTACATAAAAAGGAGTTTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTGGTGAGCAATGGTGGAGTGAGGCTCATGATTTGAGTATTTCAAGATGTCAACTAAGGGCACCTCAACCAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGCACCTCATGCCCACTGACTCAACAGGTCGAGACCTTAAGGAAATGCGGCATTCCATTGCATAATGCTTCAAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAGTTAACAAGACAAATGAGCAGAGAAACTATGACTCTCCATGCTGCAGAAGGAAAATGCTCCTAGCGAACA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTGCTTTGGGACCAAGGACAGAACCCAGAGGGCTAACAAAGAAGCACCATGGAGTTGGTACACAGACCTCTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAACGGATCCTAAATGGCTATCGCTGCTACCTGGCATCTCACCAGAGAACTGGTTCTGGAAGCTCTCAAGGAAG 592
Query 1 ------------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGAC 26
|||||||||||.|.||||.|||||.|
Sbjct 593 GTTGAAGCTTTTAACTGCTACTGACCAATACAGGAAAAACAGAAATGTATGGAGTCTCACTATGTCACCCAGGC 666
Query 27 TGGAGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGC 99
|||||||.||||||.||||||||||||||||.||||||..||.| |.||| ||||||.||.||||||.|||.||
Sbjct 667 TGGAGTGCAGTGGCGTGATCTCGGCTCACTGAAACCTCCACCGC-CCAGGTTCAAGCAATCCTCCTGTCTCAGC 739
Query 100 CTCCGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGG 173
||||.|||||||||..|.|||||||||..||.||||||||.|||||| |||||||||||||||||||||..|
Sbjct 740 CTCCTGAGTAGCTGCAACTACAGGCACCTGCCACCATGCCTGGCTAA---TTTTTGTATTTTTAGTAGAGACAG 810
Query 174 GGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------- 219
||||||.||||||||||||||||||||||.||||||||||||||.|
Sbjct 811 GGTTTCTCCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCTAAAGT 884
Query 220 -------------------------------------------------------------------------- 219
Sbjct 885 GCTGGGATTTCAGGCGTGAGCCACTGCCTTCAGCTGGAAATAGCATTTACTTTAGAGTGTGATTGTAAAGATTA 958
Query 220 -------------------------------------------------------------------------- 219
Sbjct 959 GTGTGATAATATGTACAGAACATCTTATATTCATGGAGGGCACACATTTGTTCAATGAATTGTACTGATGAGAT 1032
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1033 CACAAATCACATTTCCTCACCCTTCAACCACTGCGCATCCAATATCATTTCCAAGTAGGTATGATTTCTGAATC 1106
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1107 ATAATAGAAACTAACACTTCTTGGGTATTTCTGTTTTGTGCCTAGCACCACTATAAGTGTTTTACCTATATTAA 1180
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1181 CTCAATTAATTCTCCCAAGAATTTATGAAGTAAATGCTTTTATTTTTCCAATTTTACCGAAGAGGAAATTAAGG 1254
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1255 CAGAGAAAGTTAAAAGAAAAAAAAAAACCTTATATTACGTAGCTAGAAAGTGTCAGAGCTAGGGTTTGAACCCA 1328
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1329 AGCAATCTGGCTCCAGAGTCTTAGCCACTGGTACAGTGATTCTTTAATAGGACTACTAATAACTATATTCTTAT 1402
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1403 TGCTAACTATTCTATAAGACTTCTGGGTATTTACAGGACTGTCTTGTGTAATTATTAATAGGGCACTTTACCCA 1476
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1477 ATTCAGCCAAAATTCCTAAGGAGAATCATTGACTTAGAAAAACCACATCTGATTGAATTGAGCACGCCAAGAAT 1550
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1551 GAGGAGAGATGGTGTCTCCTTTCACAAGGGTATCTGGACAGAGCTTAAAGTGTCAATCTAATTATAAACTGTTA 1624
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1625 TTCTCCTATTATGGAAAAACCCTGTAATTGGATACTAGAAAATTCTCTGTAAAACCTTGTCCCTCAGGCAAGGC 1698
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1699 TTAATACTGGTCTCAGAAGCCCAGTTAAGTATGTTTTAAAAAATTGGTTATCCTTAAAAATACTGAAGGGAAAT 1772
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1773 ACTTCCCATTAATGCAGTTGTCATTGGATGGTAACATAATAGGTAATATATATTTTTTTCTTTTTTAAAAGTCT 1846
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1847 TTTATTCAAAATTTTTCTTAAGAGGAAGAATTGTTATAAAAACAATGTATTTCTTAAGTATAAGAAAACATTTC 1920
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1921 TACAAAAAGTAGAAATTTTAGATAAGTAAAAATAAAATGAATTATACATAATTAATTACACCATTGCATGTTAA 1994
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1995 AAATCTGCTATATTTTCCAAATTGTTCTAATGTAAGGATATTCATAAATTGTGTGAGTCTGTATAAAAGATGGA 2068
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2069 ATCATATTCTTCATGTTGCTTTCTATTCTGTTGTGCTTTTCACTTACAAGAATACTGTGAATATACTTCACTAT 2142
Query 220 --------------------- 219
Sbjct 2143 GAATAAATGCACATGTATGTC 2163
