Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_126051.2
- Aligned Length:
- 4390
- Identities:
- 188
- Gaps:
- 4178
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGATTGGGGCCTGTGGAGGCCGCACTAGGATCGTAGAAGGAGTGGAGCCGTGCTCTCACCCTGTCTTAGAGGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCGGAAGCGCCAAGTGACTGAGGGCCGAAGACACTCACCTGTGGAGCCTGTGCACGTAGGTAGAGGCGGCGGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGAGTCCAGGAGCTCCAGTGGGCAGCTCCCCAGCACCAGCCATGAACTACGTGGGGCAGCTGGCGGAGACGGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTTGGGACGGTGAAGGAGCTGTACCGGGGCCTGAACCCAGCCACACTGAGCGGCGGCATTGACGTGCTGGTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAAGCAGGTGGACGGCTCGTTCCGGTGCTCACCCTTCCACGTGCGTTTTGGCAAGCTGGGCGTCCTGCGGTCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGGGAGAAGGTGGTAGACATTGAGCTCAATGGGGAGCCTGTGGACTTGCACATGAAGCTTGGGGACAGCGGGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGCCTTCTTTGTTCAGGAGCTGGAGAGCGATGATGAACATGTGCCTCCCGGCCTGTGCACCTCACCCATCCCTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGGGGGTCTGTCTGGCTTCCCCTCGGACTCCCAGCTGGGCACTGCCAGTGAGCCTGAGGGCCTCGTCATGGCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCACGGCCTCCACTGGGCGGAGGAAGAGGCGTCGCAGGAGGAAACCCAAGCAGAAAGAGGATGCAGTGGCAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGATTCTAGTCCAGAGGAACTGGAGGCAGGCGCTGAGAGTGAGCTATCCCTGCCGGAAAAGCTGAGGCCAGAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCCCAGGCAGTGTCCAGTTGGAAGAGAAGTCTTCACTGCAGCCCAAAGACATCTACCCCTACTCGGATGGCGAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGCCCCCCCAGGCCAGCCTCTCAGCAGGTGAGCTAACATCCCCTAAGAGCGACTCGGAGCTGGAGGTGCGGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCCGGAGCCCAGTCCCCTAAGAGCCGAGTCCCACATGCAGTGGGCCTGGGGGAGGCTGCCTAAGGTGGCCAGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTGAGCGGCCCGAGTCCTCAGTGGTCCTTGAAGGCAGAGCTGGGGCAACCTCTCCTCCTCGGGGAGGACCCAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTCCCTCTACCTCTGTGGCTGGCGGCGTGGACCCTTTGGGACTCCCAATCCAGCAAACAGAGGCTGGTGCCGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTTCAGCCTGACACAGAGGATCCCACTCTAGTGGGTCCCCCTCTCCACACCCCAGAGACAGAGGAAAGCAAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTCAGAGCTCTGGGGACATGGGCCTCCCTCCTGCCTCCAAGTCATGGAGCTGGGCCACTCTGGAGGTTCCAGTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCCACCGGGCAGCCAGAGAGGGTCTCCAGGGGGAAAGGCTCCCCAAAGAGAAGCCAGCACCTGGGCCCCAGTGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CATCTACCTGGATGACTTGCCCTCCCTGGACTCTGAGAATGCAGCGCTTTACTTCCCCCAAAGTGACTCTGGGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGGGGCCAGAAGATGGAGTGAACCCAGCAGTCAGAAGTCCCTGAGGGACCCCAACCCTGAACATGAACCTGAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCCACTCTGGACACAGTGGATACAATAGCACTGTCCCTCTGTGGTGGACTGGCTGACAGCCGGGACATCTCCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGAGAAATTCAACCAGCACAGCGTCTCTTACCAGGACCTCACCAAAAACCCCGGACTTTTGGATGACCCAAACC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TAGTGGTGAAAATCAATGGAAAGCATTATAACTGGGCTGTGGCTGCCCCCATGATCCTCTCCCTGCAAGCCTTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAGAAAAACTTGCCCAAGAGCACCATGGACAAGCTGGAGAGGGAGAAGATGCCCCGGAAGGGTGGGCGATGGTG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTTTTCCTGGCGACGCAGGGACTTCCTGGCCGAGGAGTGCCCAGAAGGAGAAGACTGCAGCCAAGGAGCAGCAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GGGGAGAAGACAGAAGTCCTGAGCAGTGATGACGATGCCCCAGACAGCCCTGTGATCCTGGAGATCCCCTCCTT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCCACCCTCCACTCCACCCTCCACTCCTACCTACAAGAAGTCCCTCCGCCTCTCCTCCGATCAGATCCGGCGCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGAACCTGCAAGAAGGTGCCAATGATGTGGTCTTCAGCGTGACCACTCAGTACCAGGGCACCTGCCGCTGCAAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCCACCATCTACCTGTGGAAATGGGACGACAAGGTGGTCATCTCTGACATCGACGGCACCATCACCAAGTCAGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGCTCTGGGCCATATCCTGCCCCAGCTGGGGAAAGACTGGACACACCAGGGCATCACCAGTCTCTATCACAAAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCCAACTAAATGGGTACAAGTTCCTGTACTGCTCGGCGCGGGCCATTGGCATGGCGGACCTCACCAAGGGGTAC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTGCAGTGGAGAGGTGATCGAGAAGAAACCAGAGGTGTTCAAGGTCGCCTGCCTGAGTGACATCCAGCAGCTGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TTCTGCCCCACGGACAGCCCTTCTATGCTGCCTTTGGGAATAGGCCCAATGATGTCTTTGCCTACCGGCAGGTG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGCCTGCCTGAGTCACGCATCTTCACAGTCAACCCCCGGGGAGAGCTCATCCAGGAGCTCATAAAGAACCACAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 ATCCACGTATGAGCGGCTTGGTGAAGTGGTCGAGCTCCTCTTCCCACCTGTGGCCCGTGGCCCCAGCACAGACC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGGCCAACCCTGAATACAGTAACTTCTGCTACTGGCGGGAGCCACTGCCTGCTGTGGACCTTGATACCCTGGAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGAACCTGCCCTGGCTGGCTCCTCCTCCCTGGCCCGGCCCAGGACTGGCTAGGTGTCCTGGGGTATAGGAGGGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GGGAATTGGAGTGTCATGGGGCAAACCCACTGAAGGGGAAGGAGGAGGCTGCAGGTTGGTTGGCAGCTAGAGAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ACTCCCCCATCTTCCCCGTCATATTTTTGCCAGCTAAGCTGCAGCTGCTCCAGGCGTCAGTGTGGCACTGTCCT 2886
Query 1 ---------------------------------------------------------------------ATGGA 5
|..|.
Sbjct 2887 GGGGCAATTAGCTTGTCATCTGGGCCCTTGCAGGGTTCTTTTTTTTTTTTTTTTTTTTTTTTTCCTGAGACAGG 2960
Query 6 GTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGA--TCTCGGCTCACTGCAACCTCTGCCTCTCGAGGT 77
||||..||||||.||||||.||||||||.|||||||||| ||||||||||||||||||||.|||||.||.|.|
Sbjct 2961 GTCTTGTTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGATCTCTCGGCTCACTGCAACCTCCGCCTCCCGGGTT 3034
Query 78 CAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAGGCACACG----CAACCATGCCCGGCTAAT 147
||||||||||.||||||||.||||||..|||||||||||||||||| || |.||||.|||.||||||
Sbjct 3035 CAAGCGATTCACCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGG----CGTGTACCACCACGCCTGGCTAA- 3103
Query 148 TTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-- 219
||||.||.|||||||||||||||||.||||||||..||||||||||||||||||||||||||||||||||
Sbjct 3104 --TTTTCGTGTTTTTAGTAGAGATGGGTTTTCACCACATTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTG 3175
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3176 ATTTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCTACCATGCCAGGCCTCCTTGCAGGGTT 3249
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3250 TTCTATGCCCTTGATATCTGTCTCCCTGTCAACCTGGGACCTTGCTGTAAGTCTTGATAGGACAGGGAGAAGAG 3323
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3324 GGAGGCCCTACCGAGGCTCGAGGCTTCAGTGAAGGGTGACAGCAGTGGGAGTGTGGTACAGCCTCTGGAAGGAC 3397
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3398 ACAGTGTTCTCCCCGCCCCTTGTCTGGGAGCCAGGACTGTACCCTCCGAAGCCAGACATCACTGCCAACATATC 3471
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3472 CCCCTTGCTGGTGCCCTGGCATCTCAGCACATGACACACACCCACACCTGCAGGCTGTGGTTCCGGCTTGGCCT 3545
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3546 GCTCCCCGTCCGGCTGCTGCCGCTGCCTCTCTCCAGACCTCGCTTAAGGACAGTCCCAAACTCAGCTGGGGCAG 3619
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3620 GTGTTGGCCTGAAAGTCCTCCCCCAGCCTCTGCTGGCCAGCTTGGTGCTCACAGCTGCTGGGTAAGCTCTTGCC 3693
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3694 TAAGGAGCTGTGGGAAGCAGGGCTGATGCCCCAGCAACCTCTCCTCCCACTGTCTTTGAAGAAAGTAGCTTTAG 3767
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3768 ACCGGCTAAAAGCTTTAATCCAGAGCCTGCCCTACTCTGATAGTACCAGAGTGGAGGGCAGAATACCAAATGTC 3841
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3842 CAGGAACCAAAGGCAGGGCTGTGGGGACCTGAAGAGCAGCACAGTGGGGCCCGTGCTGCTGTGGGGGAAACTGA 3915
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3916 GGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCATAGGCCTGAGGAACATGCATTTTCA 3989
Query 220 -------------------------------------------------------------------------- 219
Sbjct 3990 AGTTGTCCATTGATGGTTTCGTACCTGAATTTCTCACCTTTTGTGAACATCTTGGGAGGGTGGGGGTTTTGCAG 4063
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4064 GGGTGTTAAAAGCAAGGCTTGGAGCCCCTTTCCTCCAGCTGGTGGCTCCTTCTCAGGGCCTGGCCTCATTCAGG 4137
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4138 CCACTTTGTAGAGAAATGCCCTGACCTCGCAGGAAGGATTTCCCCACCCCCAAGTGGAAGGAAGAGGACAGTGT 4211
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4212 GGGCACCAGAGGGCCCTGGAAACATCTTAGGGGAAGGAAAGGAAAAGGATAAATTTGGAGTGGGGGGTCTCTAA 4285
Query 220 -------------------------------------------------------------------------- 219
Sbjct 4286 ACAGATTGCCTGGATTCCGTTCTTTCCTGGGGTTCTACAGCTGCCTAAGCCCTCACCTTGGGGGAGGATCAAAG 4359
Query 220 ------------------------ 219
Sbjct 4360 GGAATAAAGAGAACTCTTGGCTGA 4383
