Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_12783
- Subject:
- NR_130909.1
- Aligned Length:
- 2690
- Identities:
- 189
- Gaps:
- 2472
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCGGGCCGGGGCGGGGCCTCGCTTCCCAGGCAAGCGCAGGTCCAGGCGGTGCAGCTTGGGCGGCCCAGCGGATC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGCCGCGGCGGCCGAGCGCAGCCTCTGGCGGGACCTCATCGACCTCGTGACCCTCTGGAAACGCAAGTGCCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGAGAGGGCTTCATCACTGAGGACTGGGACCAGCCCGTGGCCGACTGGAAGATCTTCTACTTCTTACGGAGCCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCACAGGAACCTCCTGCACAACCCGTGCGCTGAAGAGGGGTTCGAGTTCTGGAGCCTGGATGTGAATGGAGGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATGAGTGGAAGGTGGAGGATCTCTCTCGAGACCAGAGGAAGGAATTCCCCAATGACCAGGTTCGCAGCCAGGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGATTGCGGGTCCAAGTACCAGCTGTGCGTTCAGCTCCTGTCGTCCGCGCACGCGCCTCTGGGGACCTTCCAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGACCCGGCGACCATCCAGCAGAAGAGCGATGCCAAGTGGAGGGAGGTCTCCCACACATTCTCCAACTACCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCCGGCGTCCGCTACATCTGGTTTCAGCACGGCGGCGTGGACACTCATTACTGGGCCGGCTGGTACGGCCCGAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGTCACCAACAGCAGCATCACCATCGGGCCCCCGCTGCCCTGACACCCCCTGAGCCCCCATCTGCTGAACCCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACTGGTAAACAACTGCTGTCAGAAAAGGGCTGGGCTTGGGAAGGGGAGGTGGAGGCCAGGTGTCCCCAGACCTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TAACCCTTGCCCCTAGCAGCCTCTTCTTTGTGGAGCCTCTCAGTGTGGGCAGCCCTCGCATGCTGGGGTCGGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAGCTCTCCCCGAAAGGTCTTGACCTGAATGATGGCCGGGGAAGCCTGCGTGTGCCCCTTTCAGAGACGGAGCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTGAGATGTGGGAGGTGCAGCATGTTCCCCTGGGCCCCTCAGAAAGTCGAGCTTGGAGGCCAGCCTGGATCTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCTCTCCCTTCCCCTCCTGGGACCATTCTACCTGTGTTCTTTGACCCTCGGAGCAGGGACAGGCAAGACAACTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCAAGCTTGCAGCTGCCCTGATGGTGCAGGTGCAGGGAGGTGACCATGTAACTCTGACCAATCTGGGAAGTGGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGGTGGGCTCATGGGCCGTGCTCTGCCCCTGTCTGCTGCTCCCAGTCTCTCGCTCTGCCTGCCTGCTCAGAAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGTGGCTTTGGCCCAGAGGCTCAGGCCGGGACTGAGATGGACAGACCCAGGGTGGGGTGGGGTCCAGGTCGGGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTGGACTGTCCTCACTGTCAGTGGAGCCCCAGAAGCTAGATGGGTACCAGGTGGGGTTAGGTTCCCAGAGGACT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGGGAATCCTGTACAGGATGTCCCAGGGTAGATGGGGAGCAGGATTGGGACCTGCTCTGACAGCTGGACACAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAGCCCTGGATGAGTATGGTAGGGGGTTTGAAGAATCCCCTGTCCACCTCCCAAATCCAGGCCCGGCCCCCTCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGCTTGGAGAGCATTCCAAGCCCCCACCCCACCCCTAGAACTGCCATTCCCAAGACCTCTGTCTCCCAGCCAAC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CACCCTTGGAACTTGCCTCTTGTCCTGCTGGAAAGATAGCAGTGTTCTCCTGACTTCGCCCTACTGCATGCAGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAAATAAAAGGTGTGCCCAGTCTAACCTGTGCCCTGTGGTTTCTGGAAGGAAAGGCAGACTTTAGGTGGTCCTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTGGACCTGCAGATGGTACAATGGCATGGCTTCTGTCTAAGGTACAGAGGGGTTGGCATTTCAGGAACCAGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CATCACAGAAACAGGTTCATGGGCAGACCCCTCAGTGAGCTGCAGGTATCTCACCTGGCAGCCGTCCAGTACTG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGGCTTCCTCTGGAGGCCCAGCCACAGGCTGGGGTTGGGGTGTGTGGACATCTCTGGGCAGCTCTTGAGTCCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTTGTGCCAGATCAGCAGTGCCACCCAGGCTCTGCCTCCTGGTGTTACTCTTTGCCAACAGCTTTACGGACAT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TGGATGAAGCCGAAGCATTTAGAATGGTGCCTGGCACACAGTTGGTGCGTGATATGGTTAAGCTTTGTGTCCCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACCCACATCTCATCTTGAATGGTAATCCTGGGTGTTTAGGGAGAGACCTGGTGGGAAGTGATTGGATTATGGGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCGGTTTTCCCCCATGCTGTTCTCATGATAGTGAGTGAGTTCTCACGAGATCTGATGGTTTTACAAGTGACGGT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTCCCCGGCTCCCTCCTGCCGCCATGTGAAGAAGGTCGTTGCTTCCCCTTCACCTTCCACCACCATGATTGTAA 2294
Query 1 ---------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGG 29
||||||||||..||||||||||||.||||
Sbjct 2295 GTTCCTTTTTTCTTTTCTTTTCTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTCGCTCTGTCGCCCAGGCTGG 2368
Query 30 AGTGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTC 102
||||.||||||...|||||.|||||||||||.||||||||| |.||| ||..||.||||.||||||||.|||||
Sbjct 2369 AGTGCAGTGGCGCAATCTCAGCTCACTGCAAGCTCTGCCTC-CCAGGTTCGCGCCATTCACCTGCCTCAGCCTC 2441
Query 103 CGGAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGT 176
.||||||||||.||.|||||||.|.|.|.|||||||||||||||||||.||||||||||||||||||||||.||
Sbjct 2442 TGGAGTAGCTGAGACTACAGGCGCCCACCACCATGCCCGGCTAATTTTGTTTGTATTTTTAGTAGAGATGGAGT 2515
Query 177 TTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG------------------------------- 219
||||||||||||||||||.|||||||.|.|||||||||||..|
Sbjct 2516 TTCACCATGTTGGCCAGGGTGGTCTCAATCTCCTGACCTCGTGATCCACCCACCTCGACCTCCCAAAGTGCTGA 2589
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2590 GATTACAGGCGTGAGCCACCGCGCCCAGCGATTGTTTCTTGAGGCTTCCCCAGCCATATGGAACTATAAGTCAA 2663
Query 220 -------------------------- 219
Sbjct 2664 TTAAACCTCTTTCCTTTTATAAATCA 2689
